EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000017864 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 930 bases
Position: chrLG26:13190393-13191322
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000021967	zf-C2H2	PF00096.26	2.7e-61	1	11
ENSLOCP00000021967	zf-C2H2	PF00096.26	2.7e-61	2	11
ENSLOCP00000021967	zf-C2H2	PF00096.26	2.7e-61	3	11
ENSLOCP00000021967	zf-C2H2	PF00096.26	2.7e-61	4	11
ENSLOCP00000021967	zf-C2H2	PF00096.26	2.7e-61	5	11
ENSLOCP00000021967	zf-C2H2	PF00096.26	2.7e-61	6	11
ENSLOCP00000021967	zf-C2H2	PF00096.26	2.7e-61	7	11
ENSLOCP00000021967	zf-C2H2	PF00096.26	2.7e-61	8	11
ENSLOCP00000021967	zf-C2H2	PF00096.26	2.7e-61	9	11
ENSLOCP00000021967	zf-C2H2	PF00096.26	2.7e-61	10	11
ENSLOCP00000021967	zf-C2H2	PF00096.26	2.7e-61	11	11
ENSLOCP00000021967	zf-met	PF12874.7	5.4e-23	1	3
ENSLOCP00000021967	zf-met	PF12874.7	5.4e-23	2	3
ENSLOCP00000021967	zf-met	PF12874.7	5.4e-23	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000022006	-	930	-	ENSLOCP00000021967	309 (aa)	-	W5NMV8

Gene Model

Click here to download ENSLOCG00000017864's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000017864's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000017864	-	99	45.128	ENSLOCG00000017736	znf648	62	45.128
ENSLOCG00000017864	-	100	38.782	ENSLOCG00000003678	znf319b	88	38.782
ENSLOCG00000017864	-	98	39.474	ENSLOCG00000004661	-	99	39.474
ENSLOCG00000017864	-	98	39.189	ENSLOCG00000007573	scrt1b	53	39.189
ENSLOCG00000017864	-	100	39.672	ENSLOCG00000016466	-	98	39.672
ENSLOCG00000017864	-	99	39.726	ENSLOCG00000004443	snai1a	57	39.726
ENSLOCG00000017864	-	99	31.720	ENSLOCG00000000947	znf341	51	34.091
ENSLOCG00000017864	-	99	42.683	ENSLOCG00000004208	-	99	42.683
ENSLOCG00000017864	-	99	36.688	ENSLOCG00000009778	prdm5	75	36.688
ENSLOCG00000017864	-	99	41.176	ENSLOCG00000017422	-	78	41.176
ENSLOCG00000017864	-	97	41.353	ENSLOCG00000005992	SNAI2	53	41.353
ENSLOCG00000017864	-	99	41.791	ENSLOCG00000005750	gfi1b	63	41.791
ENSLOCG00000017864	-	99	50.450	ENSLOCG00000014366	-	92	47.541
ENSLOCG00000017864	-	99	42.857	ENSLOCG00000000714	-	90	42.857
ENSLOCG00000017864	-	98	40.000	ENSLOCG00000004887	SNAI3	90	39.860
ENSLOCG00000017864	-	100	40.248	ENSLOCG00000014144	-	100	40.248
ENSLOCG00000017864	-	98	47.706	ENSLOCG00000018285	-	100	47.706
ENSLOCG00000017864	-	96	37.838	ENSLOCG00000002246	scrt2	58	37.838
ENSLOCG00000017864	-	99	40.476	ENSLOCG00000003926	znf236	62	40.476
ENSLOCG00000017864	-	100	38.782	ENSLOCG00000000544	znf319b	88	38.782