EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000000061 (Gene tree)
Gene ID: 109973982
Gene Symbol: smg7
Alias: fa99h10|wu:fa99h10
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 19259 bases
Position: chrKV885004.1:98239-117497
Accession: 109973982
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000000236	EST1	PF10374.9	1.2e-25	1	1
ENSMALP00000000229	EST1	PF10374.9	1.2e-25	1	1
ENSMALP00000000219	EST1	PF10374.9	1.3e-25	1	1
ENSMALP00000000196	EST1	PF10374.9	1.3e-25	1	1
ENSMALP00000000236	EST1_DNA_bind	PF10373.9	1.2e-48	1	1
ENSMALP00000000229	EST1_DNA_bind	PF10373.9	1.2e-48	1	1
ENSMALP00000000219	EST1_DNA_bind	PF10373.9	1.3e-48	1	1
ENSMALP00000000196	EST1_DNA_bind	PF10373.9	1.4e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000000268	-	5814	XM_020623928	ENSMALP00000000236	1188 (aa)	XP_020479584	-
ENSMALT00000000221	-	6051	XM_020623923	ENSMALP00000000196	1267 (aa)	XP_020479579	-
ENSMALT00000000248	-	5964	-	ENSMALP00000000219	1238 (aa)	-	-
ENSMALT00000000258	-	5901	XM_020623927	ENSMALP00000000229	1217 (aa)	XP_020479583	-

Gene Model

Click here to download ENSMALG00000000061's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000000061's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000000061	smg7	95	68.657	ENSG00000116698	SMG7	87	93.125	Homo_sapiens
ENSMALG00000000061	smg7	84	93.304	ENSAPOG00000009611	smg7	96	93.304	Acanthochromis_polyacanthus
ENSMALG00000000061	smg7	90	68.657	ENSAMEG00000002357	SMG7	97	68.657	Ailuropoda_melanoleuca
ENSMALG00000000061	smg7	91	85.419	ENSACIG00000015152	smg7	100	83.978	Amphilophus_citrinellus
ENSMALG00000000061	smg7	94	91.152	ENSAOCG00000013538	smg7	100	91.402	Amphiprion_ocellaris
ENSMALG00000000061	smg7	94	90.992	ENSAPEG00000007851	smg7	100	91.243	Amphiprion_percula
ENSMALG00000000061	smg7	93	90.278	ENSATEG00000006931	smg7	100	84.188	Anabas_testudineus
ENSMALG00000000061	smg7	93	65.381	ENSAPLG00000015811	SMG7	99	64.580	Anas_platyrhynchos
ENSMALG00000000061	smg7	92	70.149	ENSACAG00000014989	SMG7	97	70.149	Anolis_carolinensis
ENSMALG00000000061	smg7	93	68.159	ENSANAG00000028114	SMG7	85	92.994	Aotus_nancymaae
ENSMALG00000000061	smg7	94	88.768	ENSACLG00000022079	smg7	100	87.678	Astatotilapia_calliptera
ENSMALG00000000061	smg7	93	81.818	ENSAMXG00000020809	smg7	95	81.818	Astyanax_mexicanus
ENSMALG00000000061	smg7	94	68.159	ENSBTAG00000008003	SMG7	99	65.378	Bos_taurus
ENSMALG00000000061	smg7	93	69.652	ENSCJAG00000005135	SMG7	86	92.994	Callithrix_jacchus
ENSMALG00000000061	smg7	94	69.154	ENSCAFG00000013276	SMG7	95	69.154	Canis_familiaris
ENSMALG00000000061	smg7	94	69.154	ENSCAFG00020015475	SMG7	89	90.244	Canis_lupus_dingo
ENSMALG00000000061	smg7	93	68.657	ENSCHIG00000018192	SMG7	97	68.657	Capra_hircus
ENSMALG00000000061	smg7	94	69.154	ENSTSYG00000002667	SMG7	80	94.194	Carlito_syrichta
ENSMALG00000000061	smg7	95	68.657	ENSCPOG00000008906	SMG7	96	68.159	Cavia_porcellus
ENSMALG00000000061	smg7	93	66.093	ENSCCAG00000028596	SMG7	85	92.994	Cebus_capucinus
ENSMALG00000000061	smg7	95	68.159	ENSCATG00000011063	SMG7	85	92.994	Cercocebus_atys
ENSMALG00000000061	smg7	95	68.159	ENSCLAG00000010751	SMG7	99	65.550	Chinchilla_lanigera
ENSMALG00000000061	smg7	95	68.657	ENSCSAG00000012654	SMG7	96	68.657	Chlorocebus_sabaeus
ENSMALG00000000061	smg7	84	63.690	ENSCHOG00000010522	SMG7	93	57.909	Choloepus_hoffmanni
ENSMALG00000000061	smg7	92	69.652	ENSCPBG00000015724	SMG7	97	69.652	Chrysemys_picta_bellii
ENSMALG00000000061	smg7	93	66.179	ENSCANG00000015680	SMG7	85	92.994	Colobus_angolensis_palliatus
ENSMALG00000000061	smg7	95	67.164	ENSCGRG00001013705	Smg7	99	64.893	Cricetulus_griseus_chok1gshd
ENSMALG00000000061	smg7	93	67.164	ENSCGRG00000018401	Smg7	100	64.772	Cricetulus_griseus_crigri
ENSMALG00000000061	smg7	92	85.714	ENSCVAG00000011842	smg7	100	85.714	Cyprinodon_variegatus
ENSMALG00000000061	smg7	93	81.313	ENSDARG00000060767	smg7	100	76.680	Danio_rerio
ENSMALG00000000061	smg7	93	68.657	ENSDORG00000007331	Smg7	96	68.657	Dipodomys_ordii
ENSMALG00000000061	smg7	90	63.768	ENSETEG00000002654	SMG7	99	63.140	Echinops_telfairi
ENSMALG00000000061	smg7	94	67.662	ENSEASG00005006524	SMG7	96	67.662	Equus_asinus_asinus
ENSMALG00000000061	smg7	88	86.628	ENSECAG00000004313	SMG7	96	68.159	Equus_caballus
ENSMALG00000000061	smg7	90	64.731	ENSEEUG00000002024	SMG7	94	63.001	Erinaceus_europaeus
ENSMALG00000000061	smg7	94	77.778	ENSELUG00000010293	smg7	100	77.529	Esox_lucius
ENSMALG00000000061	smg7	94	69.652	ENSFCAG00000010900	SMG7	99	68.293	Felis_catus
ENSMALG00000000061	smg7	91	69.652	ENSFALG00000003047	SMG7	97	70.149	Ficedula_albicollis
ENSMALG00000000061	smg7	93	67.980	ENSFDAG00000012121	SMG7	96	67.980	Fukomys_damarensis
ENSMALG00000000061	smg7	93	83.174	ENSFHEG00000011073	smg7	100	83.348	Fundulus_heteroclitus
ENSMALG00000000061	smg7	83	81.015	ENSGMOG00000004916	smg7	91	81.015	Gadus_morhua
ENSMALG00000000061	smg7	93	65.299	ENSGALG00000004667	SMG7	99	64.872	Gallus_gallus
ENSMALG00000000061	smg7	93	82.143	ENSGAFG00000019000	smg7	100	81.794	Gambusia_affinis
ENSMALG00000000061	smg7	91	88.000	ENSGACG00000001634	smg7	99	82.543	Gasterosteus_aculeatus
ENSMALG00000000061	smg7	95	68.159	ENSGGOG00000002342	SMG7	82	91.875	Gorilla_gorilla
ENSMALG00000000061	smg7	94	87.843	ENSHBUG00000003726	smg7	100	87.846	Haplochromis_burtoni
ENSMALG00000000061	smg7	92	67.980	ENSHGLG00000009353	SMG7	97	67.980	Heterocephalus_glaber_female
ENSMALG00000000061	smg7	92	67.980	ENSHGLG00100009637	-	97	67.980	Heterocephalus_glaber_male
ENSMALG00000000061	smg7	91	61.607	ENSHGLG00100004878	-	99	58.134	Heterocephalus_glaber_male
ENSMALG00000000061	smg7	93	81.910	ENSIPUG00000016997	smg7	100	76.171	Ictalurus_punctatus
ENSMALG00000000061	smg7	93	68.657	ENSSTOG00000000401	SMG7	96	68.657	Ictidomys_tridecemlineatus
ENSMALG00000000061	smg7	91	69.154	ENSJJAG00000012351	Smg7	96	68.159	Jaculus_jaculus
ENSMALG00000000061	smg7	91	81.932	ENSKMAG00000004900	smg7	100	81.737	Kryptolebias_marmoratus
ENSMALG00000000061	smg7	50	80.369	ENSLBEG00000005220	-	75	80.369	Labrus_bergylta
ENSMALG00000000061	smg7	93	88.860	ENSLBEG00000002983	smg7	99	88.772	Labrus_bergylta
ENSMALG00000000061	smg7	93	70.647	ENSLACG00000000972	SMG7	97	71.144	Latimeria_chalumnae
ENSMALG00000000061	smg7	93	71.546	ENSLOCG00000002010	smg7	99	71.299	Lepisosteus_oculatus
ENSMALG00000000061	smg7	94	67.662	ENSLAFG00000008186	SMG7	97	67.662	Loxodonta_africana
ENSMALG00000000061	smg7	95	68.159	ENSMFAG00000031653	SMG7	85	92.994	Macaca_fascicularis
ENSMALG00000000061	smg7	95	68.159	ENSMMUG00000018458	SMG7	96	68.159	Macaca_mulatta
ENSMALG00000000061	smg7	93	66.266	ENSMNEG00000034798	SMG7	85	92.994	Macaca_nemestrina
ENSMALG00000000061	smg7	95	68.159	ENSMLEG00000037170	SMG7	97	68.159	Mandrillus_leucophaeus
ENSMALG00000000061	smg7	82	89.036	ENSMAMG00000018733	smg7	86	87.996	Mastacembelus_armatus
ENSMALG00000000061	smg7	94	88.684	ENSMZEG00005015247	smg7	100	87.678	Maylandia_zebra
ENSMALG00000000061	smg7	91	64.948	ENSMGAG00000001561	SMG7	99	64.574	Meleagris_gallopavo
ENSMALG00000000061	smg7	93	67.662	ENSMAUG00000019484	Smg7	99	64.721	Mesocricetus_auratus
ENSMALG00000000061	smg7	94	68.159	ENSMICG00000007145	SMG7	82	92.994	Microcebus_murinus
ENSMALG00000000061	smg7	93	66.667	ENSMOCG00000020748	Smg7	99	64.175	Microtus_ochrogaster
ENSMALG00000000061	smg7	93	83.070	ENSMMOG00000001524	smg7	98	87.500	Mola_mola
ENSMALG00000000061	smg7	86	65.659	ENSMODG00000007139	SMG7	99	66.045	Monodelphis_domestica
ENSMALG00000000061	smg7	93	67.164	MGP_CAROLIEiJ_G0014704	Smg7	99	64.888	Mus_caroli
ENSMALG00000000061	smg7	93	67.164	ENSMUSG00000042772	Smg7	99	64.519	Mus_musculus
ENSMALG00000000061	smg7	93	67.164	MGP_PahariEiJ_G0027940	Smg7	99	64.863	Mus_pahari
ENSMALG00000000061	smg7	93	67.164	MGP_SPRETEiJ_G0015511	Smg7	99	64.605	Mus_spretus
ENSMALG00000000061	smg7	92	68.657	ENSMPUG00000011732	SMG7	94	68.657	Mustela_putorius_furo
ENSMALG00000000061	smg7	93	67.662	ENSMLUG00000015417	SMG7	96	67.662	Myotis_lucifugus
ENSMALG00000000061	smg7	93	65.672	ENSNGAG00000009836	Smg7	100	64.500	Nannospalax_galili
ENSMALG00000000061	smg7	92	80.776	ENSNBRG00000024343	smg7	99	80.796	Neolamprologus_brichardi
ENSMALG00000000061	smg7	95	68.657	ENSNLEG00000018018	SMG7	97	68.657	Nomascus_leucogenys
ENSMALG00000000061	smg7	66	65.341	ENSMEUG00000004681	SMG7	73	65.341	Notamacropus_eugenii
ENSMALG00000000061	smg7	88	62.430	ENSOPRG00000013942	SMG7	96	59.008	Ochotona_princeps
ENSMALG00000000061	smg7	93	67.980	ENSODEG00000010390	SMG7	99	65.352	Octodon_degus
ENSMALG00000000061	smg7	93	89.151	ENSONIG00000000277	smg7	100	88.014	Oreochromis_niloticus
ENSMALG00000000061	smg7	91	69.154	ENSOANG00000000994	SMG7	100	62.917	Ornithorhynchus_anatinus
ENSMALG00000000061	smg7	93	64.179	ENSOCUG00000005887	SMG7	93	61.716	Oryctolagus_cuniculus
ENSMALG00000000061	smg7	93	83.251	ENSORLG00000007314	smg7	100	80.756	Oryzias_latipes
ENSMALG00000000061	smg7	93	84.236	ENSORLG00020015779	smg7	100	81.107	Oryzias_latipes_hni
ENSMALG00000000061	smg7	93	84.236	ENSORLG00015012289	smg7	100	81.019	Oryzias_latipes_hsok
ENSMALG00000000061	smg7	93	85.714	ENSOMEG00000002328	smg7	100	81.313	Oryzias_melastigma
ENSMALG00000000061	smg7	90	64.634	ENSOGAG00000003107	SMG7	93	62.960	Otolemur_garnettii
ENSMALG00000000061	smg7	94	68.657	ENSOARG00000001352	SMG7	100	64.429	Ovis_aries
ENSMALG00000000061	smg7	93	66.352	ENSPPAG00000031619	SMG7	90	89.697	Pan_paniscus
ENSMALG00000000061	smg7	94	69.652	ENSPPRG00000011222	SMG7	99	65.434	Panthera_pardus
ENSMALG00000000061	smg7	90	69.652	ENSPTIG00000007242	SMG7	97	69.154	Panthera_tigris_altaica
ENSMALG00000000061	smg7	93	66.352	ENSPTRG00000001764	SMG7	85	92.994	Pan_troglodytes
ENSMALG00000000061	smg7	95	68.159	ENSPANG00000004520	SMG7	99	65.636	Papio_anubis
ENSMALG00000000061	smg7	94	70.701	ENSPKIG00000007242	smg7	100	70.451	Paramormyrops_kingsleyae
ENSMALG00000000061	smg7	92	69.652	ENSPSIG00000012201	SMG7	96	69.652	Pelodiscus_sinensis
ENSMALG00000000061	smg7	62	60.396	ENSPMGG00000021833	smg7	96	58.416	Periophthalmus_magnuspinnatus
ENSMALG00000000061	smg7	93	67.164	ENSPEMG00000011315	Smg7	97	67.164	Peromyscus_maniculatus_bairdii
ENSMALG00000000061	smg7	93	70.647	ENSPCIG00000003786	SMG7	88	93.711	Phascolarctos_cinereus
ENSMALG00000000061	smg7	94	83.375	ENSPFOG00000019219	smg7	100	83.041	Poecilia_formosa
ENSMALG00000000061	smg7	93	83.609	ENSPLAG00000001446	smg7	100	83.261	Poecilia_latipinna
ENSMALG00000000061	smg7	90	83.243	ENSPMEG00000005218	smg7	99	82.883	Poecilia_mexicana
ENSMALG00000000061	smg7	82	79.962	ENSPREG00000019039	smg7	92	79.003	Poecilia_reticulata
ENSMALG00000000061	smg7	93	66.352	ENSPPYG00000000427	SMG7	99	65.722	Pongo_abelii
ENSMALG00000000061	smg7	79	72.867	ENSPCAG00000008360	SMG7	86	72.867	Procavia_capensis
ENSMALG00000000061	smg7	94	69.154	ENSPCOG00000011996	SMG7	77	92.994	Propithecus_coquereli
ENSMALG00000000061	smg7	84	70.874	ENSPVAG00000000851	SMG7	83	70.874	Pteropus_vampyrus
ENSMALG00000000061	smg7	94	88.000	ENSPNYG00000007643	smg7	100	87.836	Pundamilia_nyererei
ENSMALG00000000061	smg7	93	82.828	ENSPNAG00000011374	smg7	95	82.323	Pygocentrus_nattereri
ENSMALG00000000061	smg7	95	68.317	ENSRNOG00000027962	Smg7	99	66.133	Rattus_norvegicus
ENSMALG00000000061	smg7	95	68.159	ENSRBIG00000036316	SMG7	97	68.159	Rhinopithecus_bieti
ENSMALG00000000061	smg7	95	68.159	ENSRROG00000035719	SMG7	97	68.159	Rhinopithecus_roxellana
ENSMALG00000000061	smg7	91	68.159	ENSSBOG00000023454	SMG7	87	93.125	Saimiri_boliviensis_boliviensis
ENSMALG00000000061	smg7	93	66.351	ENSSHAG00000013147	SMG7	99	65.810	Sarcophilus_harrisii
ENSMALG00000000061	smg7	94	74.562	ENSSFOG00015017252	smg7	100	74.229	Scleropages_formosus
ENSMALG00000000061	smg7	94	87.121	ENSSMAG00000006067	smg7	100	86.831	Scophthalmus_maximus
ENSMALG00000000061	smg7	90	95.172	ENSSDUG00000017543	smg7	100	89.706	Seriola_dumerili
ENSMALG00000000061	smg7	93	65.277	ENSSPUG00000002064	SMG7	99	65.240	Sphenodon_punctatus
ENSMALG00000000061	smg7	93	88.256	ENSSPAG00000008733	smg7	99	87.105	Stegastes_partitus
ENSMALG00000000061	smg7	94	69.652	ENSSSCG00000015558	SMG7	96	69.652	Sus_scrofa
ENSMALG00000000061	smg7	93	65.184	ENSTGUG00000003928	SMG7	100	65.120	Taeniopygia_guttata
ENSMALG00000000061	smg7	93	79.397	ENSTNIG00000002802	smg7	96	79.397	Tetraodon_nigroviridis
ENSMALG00000000061	smg7	73	68.000	ENSTBEG00000003220	SMG7	75	68.000	Tupaia_belangeri
ENSMALG00000000061	smg7	89	65.156	ENSTTRG00000014778	SMG7	94	63.216	Tursiops_truncatus
ENSMALG00000000061	smg7	90	63.790	ENSUAMG00000017473	SMG7	100	63.280	Ursus_americanus
ENSMALG00000000061	smg7	90	69.154	ENSUMAG00000016389	SMG7	97	69.154	Ursus_maritimus
ENSMALG00000000061	smg7	94	69.154	ENSVVUG00000008976	SMG7	99	68.293	Vulpes_vulpes
ENSMALG00000000061	smg7	93	59.423	ENSXETG00000012528	smg7	99	58.863	Xenopus_tropicalis
ENSMALG00000000061	smg7	93	83.159	ENSXMAG00000007123	smg7	100	82.635	Xiphophorus_maculatus