EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000000089 (Gene tree)
Gene ID: 109964667
Gene Symbol: prpf6
Alias: c20orf14|fc12b02|wu:fa05f07|wu:fc12b02|zgc:65913
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 16125 bases
Position: chrKV884779.1:850344-866468
Accession: 109964667
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000000170	PRP1_N	PF06424.12	1.2e-57	1	1
ENSMALP00000000195	PRP1_N	PF06424.12	1.2e-57	1	1
ENSMALP00000000228	PRP1_N	PF06424.12	6.4e-56	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000000219	-	7668	XM_020608142	ENSMALP00000000195	920 (aa)	XP_020463798	UPI0009B2EB62
ENSMALT00000000257	-	2772	-	ENSMALP00000000228	923 (aa)	-	-
ENSMALT00000000194	-	7668	-	ENSMALP00000000170	920 (aa)	-	UPI0009B2EB62

Gene Model

Click here to download ENSMALG00000000089's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000000089's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000000089	prpf6	100	92.159	ENSG00000101161	PRPF6	99	92.159	Homo_sapiens
ENSMALG00000000089	prpf6	100	98.370	ENSAPOG00000010395	prpf6	95	98.370	Acanthochromis_polyacanthus
ENSMALG00000000089	prpf6	99	91.918	ENSAMEG00000001916	PRPF6	98	91.918	Ailuropoda_melanoleuca
ENSMALG00000000089	prpf6	100	98.043	ENSACIG00000019862	prpf6	95	98.043	Amphilophus_citrinellus
ENSMALG00000000089	prpf6	100	98.478	ENSAOCG00000012988	prpf6	95	98.478	Amphiprion_ocellaris
ENSMALG00000000089	prpf6	100	91.304	ENSAPEG00000008301	prpf6	99	91.522	Amphiprion_percula
ENSMALG00000000089	prpf6	100	98.043	ENSATEG00000005581	prpf6	95	98.043	Anabas_testudineus
ENSMALG00000000089	prpf6	100	92.481	ENSACAG00000006464	PRPF6	94	92.481	Anolis_carolinensis
ENSMALG00000000089	prpf6	100	92.159	ENSANAG00000012661	PRPF6	99	93.325	Aotus_nancymaae
ENSMALG00000000089	prpf6	100	98.152	ENSACLG00000025875	prpf6	95	98.152	Astatotilapia_calliptera
ENSMALG00000000089	prpf6	100	94.583	ENSAMXG00000001929	prpf6	95	94.583	Astyanax_mexicanus
ENSMALG00000000089	prpf6	100	92.481	ENSBTAG00000011656	PRPF6	99	92.481	Bos_taurus
ENSMALG00000000089	prpf6	100	92.159	ENSCJAG00000010616	PRPF6	99	92.159	Callithrix_jacchus
ENSMALG00000000089	prpf6	100	92.589	ENSCAFG00000013165	PRPF6	99	92.589	Canis_familiaris
ENSMALG00000000089	prpf6	100	92.589	ENSCAFG00020002050	PRPF6	99	92.589	Canis_lupus_dingo
ENSMALG00000000089	prpf6	100	92.481	ENSCHIG00000018187	PRPF6	99	92.481	Capra_hircus
ENSMALG00000000089	prpf6	100	92.696	ENSTSYG00000007814	PRPF6	99	92.696	Carlito_syrichta
ENSMALG00000000089	prpf6	98	91.712	ENSCAPG00000015077	PRPF6	100	91.276	Cavia_aperea
ENSMALG00000000089	prpf6	100	93.018	ENSCPOG00000007518	PRPF6	99	93.018	Cavia_porcellus
ENSMALG00000000089	prpf6	100	89.044	ENSCCAG00000024564	PRPF6	99	89.044	Cebus_capucinus
ENSMALG00000000089	prpf6	100	92.266	ENSCATG00000037473	PRPF6	99	92.266	Cercocebus_atys
ENSMALG00000000089	prpf6	100	89.259	ENSCLAG00000003854	PRPF6	99	89.259	Chinchilla_lanigera
ENSMALG00000000089	prpf6	100	87.300	ENSCSAG00000016742	PRPF6	99	87.300	Chlorocebus_sabaeus
ENSMALG00000000089	prpf6	86	78.049	ENSCHOG00000003315	-	99	77.961	Choloepus_hoffmanni
ENSMALG00000000089	prpf6	100	93.011	ENSCPBG00000013964	PRPF6	95	93.011	Chrysemys_picta_bellii
ENSMALG00000000089	prpf6	99	72.436	ENSCING00000008817	-	98	72.436	Ciona_intestinalis
ENSMALG00000000089	prpf6	100	92.052	ENSCANG00000038230	PRPF6	99	92.052	Colobus_angolensis_palliatus
ENSMALG00000000089	prpf6	100	93.018	ENSCGRG00001022666	Prpf6	99	93.018	Cricetulus_griseus_chok1gshd
ENSMALG00000000089	prpf6	100	92.174	ENSCSEG00000018561	prpf6	99	92.174	Cynoglossus_semilaevis
ENSMALG00000000089	prpf6	100	97.174	ENSCVAG00000010550	prpf6	95	97.174	Cyprinodon_variegatus
ENSMALG00000000089	prpf6	100	94.156	ENSDARG00000091367	prpf6	98	94.156	Danio_rerio
ENSMALG00000000089	prpf6	100	92.266	ENSDNOG00000040544	PRPF6	99	92.266	Dasypus_novemcinctus
ENSMALG00000000089	prpf6	92	92.640	ENSDORG00000005406	Prpf6	100	92.640	Dipodomys_ordii
ENSMALG00000000089	prpf6	99	72.052	FBgn0036828	CG6841	98	72.052	Drosophila_melanogaster
ENSMALG00000000089	prpf6	86	91.228	ENSETEG00000004447	PRPF6	84	91.228	Echinops_telfairi
ENSMALG00000000089	prpf6	100	85.974	ENSEBUG00000008835	prpf6	99	85.974	Eptatretus_burgeri
ENSMALG00000000089	prpf6	100	92.696	ENSEASG00005023115	PRPF6	99	92.696	Equus_asinus_asinus
ENSMALG00000000089	prpf6	100	88.400	ENSECAG00000013983	PRPF6	99	88.400	Equus_caballus
ENSMALG00000000089	prpf6	88	88.453	ENSEEUG00000000180	PRPF6	78	88.453	Erinaceus_europaeus
ENSMALG00000000089	prpf6	100	94.908	ENSELUG00000001945	prpf6	92	94.908	Esox_lucius
ENSMALG00000000089	prpf6	100	92.589	ENSFCAG00000001183	PRPF6	99	92.589	Felis_catus
ENSMALG00000000089	prpf6	100	92.803	ENSFALG00000010326	-	96	92.803	Ficedula_albicollis
ENSMALG00000000089	prpf6	100	86.774	ENSFALG00000006046	-	96	86.774	Ficedula_albicollis
ENSMALG00000000089	prpf6	98	92.912	ENSFDAG00000006451	PRPF6	100	92.630	Fukomys_damarensis
ENSMALG00000000089	prpf6	100	97.826	ENSFHEG00000000560	prpf6	95	97.826	Fundulus_heteroclitus
ENSMALG00000000089	prpf6	100	94.060	ENSGMOG00000015622	prpf6	98	94.060	Gadus_morhua
ENSMALG00000000089	prpf6	100	92.589	ENSGALG00000006001	PRPF6	99	92.589	Gallus_gallus
ENSMALG00000000089	prpf6	100	92.609	ENSGAFG00000021109	prpf6	95	92.609	Gambusia_affinis
ENSMALG00000000089	prpf6	100	95.788	ENSGACG00000002576	prpf6	98	95.788	Gasterosteus_aculeatus
ENSMALG00000000089	prpf6	100	93.118	ENSGAGG00000008653	PRPF6	95	93.118	Gopherus_agassizii
ENSMALG00000000089	prpf6	100	92.159	ENSGGOG00000016876	PRPF6	99	92.159	Gorilla_gorilla
ENSMALG00000000089	prpf6	100	98.152	ENSHBUG00000004496	prpf6	95	98.152	Haplochromis_burtoni
ENSMALG00000000089	prpf6	100	92.911	ENSHGLG00000009222	PRPF6	99	92.911	Heterocephalus_glaber_female
ENSMALG00000000089	prpf6	98	92.803	ENSHGLG00100016600	PRPF6	100	92.803	Heterocephalus_glaber_male
ENSMALG00000000089	prpf6	100	96.957	ENSHCOG00000011513	prpf6	95	96.957	Hippocampus_comes
ENSMALG00000000089	prpf6	100	94.270	ENSIPUG00000004912	prpf6	95	94.270	Ictalurus_punctatus
ENSMALG00000000089	prpf6	100	90.451	ENSSTOG00000002922	PRPF6	99	90.021	Ictidomys_tridecemlineatus
ENSMALG00000000089	prpf6	100	93.018	ENSJJAG00000000836	Prpf6	99	93.018	Jaculus_jaculus
ENSMALG00000000089	prpf6	100	98.043	ENSKMAG00000017800	prpf6	95	98.043	Kryptolebias_marmoratus
ENSMALG00000000089	prpf6	100	97.174	ENSLBEG00000012582	prpf6	95	97.174	Labrus_bergylta
ENSMALG00000000089	prpf6	100	94.516	ENSLOCG00000004827	prpf6	95	93.118	Lepisosteus_oculatus
ENSMALG00000000089	prpf6	100	92.266	ENSLAFG00000005272	PRPF6	99	92.266	Loxodonta_africana
ENSMALG00000000089	prpf6	100	92.052	ENSMFAG00000037542	PRPF6	99	92.052	Macaca_fascicularis
ENSMALG00000000089	prpf6	92	93.934	ENSMMUG00000015558	PRPF6	98	93.934	Macaca_mulatta
ENSMALG00000000089	prpf6	100	79.443	ENSMNEG00000045555	PRPF6	99	79.443	Macaca_nemestrina
ENSMALG00000000089	prpf6	100	98.587	ENSMAMG00000010718	prpf6	95	98.587	Mastacembelus_armatus
ENSMALG00000000089	prpf6	95	97.600	ENSMZEG00005026539	prpf6	100	97.600	Maylandia_zebra
ENSMALG00000000089	prpf6	100	97.611	ENSMZEG00005015261	-	98	97.611	Maylandia_zebra
ENSMALG00000000089	prpf6	98	92.694	ENSMGAG00000006634	PRPF6	100	92.694	Meleagris_gallopavo
ENSMALG00000000089	prpf6	100	93.018	ENSMAUG00000013969	Prpf6	99	93.018	Mesocricetus_auratus
ENSMALG00000000089	prpf6	88	91.849	ENSMICG00000017793	PRPF6	98	91.862	Microcebus_murinus
ENSMALG00000000089	prpf6	100	92.911	ENSMOCG00000001701	Prpf6	99	92.911	Microtus_ochrogaster
ENSMALG00000000089	prpf6	100	96.630	ENSMMOG00000020419	prpf6	99	96.630	Mola_mola
ENSMALG00000000089	prpf6	97	93.883	ENSMODG00000017051	PRPF6	98	93.883	Monodelphis_domestica
ENSMALG00000000089	prpf6	100	86.574	MGP_CAROLIEiJ_G0024814	Prpf6	100	92.593	Mus_caroli
ENSMALG00000000089	prpf6	100	93.018	ENSMUSG00000002455	Prpf6	100	92.593	Mus_musculus
ENSMALG00000000089	prpf6	100	93.018	MGP_PahariEiJ_G0026262	Prpf6	100	92.593	Mus_pahari
ENSMALG00000000089	prpf6	100	93.018	MGP_SPRETEiJ_G0025741	Prpf6	100	92.593	Mus_spretus
ENSMALG00000000089	prpf6	91	93.074	ENSMPUG00000008673	PRPF6	99	92.610	Mustela_putorius_furo
ENSMALG00000000089	prpf6	100	93.126	ENSNGAG00000003365	Prpf6	99	93.126	Nannospalax_galili
ENSMALG00000000089	prpf6	100	98.261	ENSNBRG00000015025	prpf6	95	98.261	Neolamprologus_brichardi
ENSMALG00000000089	prpf6	100	92.052	ENSNLEG00000010208	PRPF6	99	92.052	Nomascus_leucogenys
ENSMALG00000000089	prpf6	100	83.133	ENSMEUG00000009824	-	89	83.399	Notamacropus_eugenii
ENSMALG00000000089	prpf6	100	87.003	ENSODEG00000004841	PRPF6	99	87.003	Octodon_degus
ENSMALG00000000089	prpf6	100	98.152	ENSONIG00000017406	prpf6	95	98.152	Oreochromis_niloticus
ENSMALG00000000089	prpf6	100	92.911	ENSOANG00000004920	PRPF6	99	92.911	Ornithorhynchus_anatinus
ENSMALG00000000089	prpf6	100	90.655	ENSOCUG00000014151	PRPF6	99	90.655	Oryctolagus_cuniculus
ENSMALG00000000089	prpf6	100	96.957	ENSORLG00000009592	prpf6	95	96.957	Oryzias_latipes
ENSMALG00000000089	prpf6	100	97.065	ENSORLG00020001458	prpf6	95	97.065	Oryzias_latipes_hni
ENSMALG00000000089	prpf6	100	97.065	ENSORLG00015018762	prpf6	95	97.065	Oryzias_latipes_hsok
ENSMALG00000000089	prpf6	100	97.065	ENSOMEG00000012174	prpf6	95	97.065	Oryzias_melastigma
ENSMALG00000000089	prpf6	100	85.515	ENSOGAG00000007573	PRPF6	99	85.515	Otolemur_garnettii
ENSMALG00000000089	prpf6	100	92.052	ENSOARG00000008776	PRPF6	98	92.052	Ovis_aries
ENSMALG00000000089	prpf6	100	92.159	ENSPPAG00000008686	PRPF6	99	92.159	Pan_paniscus
ENSMALG00000000089	prpf6	100	92.589	ENSPPRG00000008497	PRPF6	99	92.589	Panthera_pardus
ENSMALG00000000089	prpf6	98	92.475	ENSPTIG00000011184	PRPF6	97	92.475	Panthera_tigris_altaica
ENSMALG00000000089	prpf6	100	92.159	ENSPTRG00000013765	PRPF6	99	92.159	Pan_troglodytes
ENSMALG00000000089	prpf6	100	91.837	ENSPANG00000024135	PRPF6	99	91.837	Papio_anubis
ENSMALG00000000089	prpf6	100	94.839	ENSPKIG00000005627	prpf6	98	94.839	Paramormyrops_kingsleyae
ENSMALG00000000089	prpf6	95	92.517	ENSPSIG00000007717	PRPF6	100	92.517	Pelodiscus_sinensis
ENSMALG00000000089	prpf6	100	95.765	ENSPMGG00000008925	prpf6	95	95.765	Periophthalmus_magnuspinnatus
ENSMALG00000000089	prpf6	100	93.018	ENSPEMG00000016036	Prpf6	99	93.018	Peromyscus_maniculatus_bairdii
ENSMALG00000000089	prpf6	100	88.065	ENSPMAG00000006144	prpf6	98	88.065	Petromyzon_marinus
ENSMALG00000000089	prpf6	100	93.018	ENSPCIG00000017909	PRPF6	99	93.018	Phascolarctos_cinereus
ENSMALG00000000089	prpf6	100	96.555	ENSPFOG00000006431	prpf6	95	96.555	Poecilia_formosa
ENSMALG00000000089	prpf6	100	97.391	ENSPLAG00000005974	prpf6	95	97.391	Poecilia_latipinna
ENSMALG00000000089	prpf6	100	97.717	ENSPMEG00000009977	prpf6	95	97.717	Poecilia_mexicana
ENSMALG00000000089	prpf6	100	97.609	ENSPREG00000017993	prpf6	91	97.609	Poecilia_reticulata
ENSMALG00000000089	prpf6	100	91.622	ENSPPYG00000011256	PRPF6	99	91.622	Pongo_abelii
ENSMALG00000000089	prpf6	96	94.771	ENSPCAG00000006536	PRPF6	88	94.771	Procavia_capensis
ENSMALG00000000089	prpf6	100	92.159	ENSPCOG00000016881	PRPF6	99	92.159	Propithecus_coquereli
ENSMALG00000000089	prpf6	100	86.574	ENSPVAG00000014316	PRPF6	99	86.574	Pteropus_vampyrus
ENSMALG00000000089	prpf6	100	83.676	ENSPNYG00000001939	prpf6	95	83.676	Pundamilia_nyererei
ENSMALG00000000089	prpf6	100	95.130	ENSPNAG00000015606	prpf6	95	95.130	Pygocentrus_nattereri
ENSMALG00000000089	prpf6	100	92.911	ENSRNOG00000051498	Prpf6	99	92.911	Rattus_norvegicus
ENSMALG00000000089	prpf6	100	92.052	ENSRBIG00000043613	PRPF6	99	92.052	Rhinopithecus_bieti
ENSMALG00000000089	prpf6	100	88.984	ENSRROG00000040969	PRPF6	98	92.561	Rhinopithecus_roxellana
ENSMALG00000000089	prpf6	92	89.381	ENSSBOG00000020632	PRPF6	93	87.889	Saimiri_boliviensis_boliviensis
ENSMALG00000000089	prpf6	100	93.018	ENSSHAG00000016810	PRPF6	99	93.018	Sarcophilus_harrisii
ENSMALG00000000089	prpf6	100	94.839	ENSSFOG00015020859	prpf6	100	94.839	Scleropages_formosus
ENSMALG00000000089	prpf6	100	97.935	ENSSMAG00000008112	prpf6	95	97.935	Scophthalmus_maximus
ENSMALG00000000089	prpf6	100	98.587	ENSSDUG00000016142	prpf6	95	98.587	Seriola_dumerili
ENSMALG00000000089	prpf6	100	98.587	ENSSLDG00000025283	prpf6	95	98.587	Seriola_lalandi_dorsalis
ENSMALG00000000089	prpf6	95	91.260	ENSSPUG00000018260	PRPF6	100	91.260	Sphenodon_punctatus
ENSMALG00000000089	prpf6	100	98.370	ENSSPAG00000015850	prpf6	95	98.370	Stegastes_partitus
ENSMALG00000000089	prpf6	100	92.159	ENSSSCG00000029119	PRPF6	100	91.723	Sus_scrofa
ENSMALG00000000089	prpf6	100	92.911	ENSTGUG00000007221	PRPF6	99	92.911	Taeniopygia_guttata
ENSMALG00000000089	prpf6	100	96.848	ENSTRUG00000002920	prpf6	95	96.848	Takifugu_rubripes
ENSMALG00000000089	prpf6	100	89.796	ENSTNIG00000017873	prpf6	99	89.796	Tetraodon_nigroviridis
ENSMALG00000000089	prpf6	90	94.444	ENSTBEG00000005348	PRPF6	85	94.444	Tupaia_belangeri
ENSMALG00000000089	prpf6	100	92.266	ENSTTRG00000013068	PRPF6	99	92.266	Tursiops_truncatus
ENSMALG00000000089	prpf6	99	90.978	ENSUMAG00000021631	PRPF6	98	91.058	Ursus_maritimus
ENSMALG00000000089	prpf6	100	92.589	ENSVVUG00000014948	PRPF6	99	92.589	Vulpes_vulpes
ENSMALG00000000089	prpf6	100	92.151	ENSXETG00000012054	prpf6	96	92.151	Xenopus_tropicalis
ENSMALG00000000089	prpf6	100	97.609	ENSXCOG00000008082	prpf6	95	97.609	Xiphophorus_couchianus
ENSMALG00000000089	prpf6	100	97.609	ENSXMAG00000015581	prpf6	95	97.609	Xiphophorus_maculatus