EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000000148 (Gene tree)
Gene ID: 109954793
Gene Symbol: sf3a1
Alias: si:dz150f13.2|wu:fc38e01|wu:fc50a11|wu:fj37c05
Full Name: splicing factor 3a subunit 1
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 6426 bases
Position: chrKV884700.1:4810607-4817032
Accession: 109954793
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000000200	PRP21_like_P	PF12230.8	1.3e-52	1	1
ENSMALP00000000182	PRP21_like_P	PF12230.8	1.5e-52	1	1
ENSMALP00000000182	Surp	PF01805.20	1.9e-45	1	2
ENSMALP00000000182	Surp	PF01805.20	1.9e-45	2	2
ENSMALP00000000200	Surp	PF01805.20	1.4e-36	1	2
ENSMALP00000000200	Surp	PF01805.20	1.4e-36	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000000224	-	3674	-	ENSMALP00000000200	742 (aa)	-	-
ENSMALT00000000206	-	2364	XM_020590384	ENSMALP00000000182	787 (aa)	XP_020446040	-

Gene Model

Click here to download ENSMALG00000000148's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000000148's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000000148	sf3a1	99	86.104	ENSG00000099995	SF3A1	100	84.509	Homo_sapiens
ENSMALG00000000148	sf3a1	100	95.063	ENSAPOG00000020465	sf3a1	100	94.684	Acanthochromis_polyacanthus
ENSMALG00000000148	sf3a1	99	85.831	ENSAMEG00000007737	SF3A1	100	83.794	Ailuropoda_melanoleuca
ENSMALG00000000148	sf3a1	100	94.670	ENSACIG00000020672	sf3a1	100	94.289	Amphilophus_citrinellus
ENSMALG00000000148	sf3a1	100	95.316	ENSAOCG00000003060	sf3a1	100	94.937	Amphiprion_ocellaris
ENSMALG00000000148	sf3a1	100	95.443	ENSAPEG00000010735	sf3a1	100	95.063	Amphiprion_percula
ENSMALG00000000148	sf3a1	99	95.504	ENSATEG00000021201	sf3a1	97	94.668	Anabas_testudineus
ENSMALG00000000148	sf3a1	99	83.832	ENSAPLG00000009057	SF3A1	100	83.929	Anas_platyrhynchos
ENSMALG00000000148	sf3a1	99	82.713	ENSACAG00000009415	SF3A1	100	81.088	Anolis_carolinensis
ENSMALG00000000148	sf3a1	99	85.831	ENSANAG00000032045	SF3A1	100	84.257	Aotus_nancymaae
ENSMALG00000000148	sf3a1	100	93.647	ENSACLG00000012622	sf3a1	100	92.884	Astatotilapia_calliptera
ENSMALG00000000148	sf3a1	99	89.688	ENSAMXG00000005382	sf3a1	99	89.327	Astyanax_mexicanus
ENSMALG00000000148	sf3a1	99	86.104	ENSBTAG00000003390	SF3A1	100	84.509	Bos_taurus
ENSMALG00000000148	sf3a1	81	45.611	WBGene00004188	prp-21	90	44.633	Caenorhabditis_elegans
ENSMALG00000000148	sf3a1	99	85.967	ENSCJAG00000010370	SF3A1	100	84.509	Callithrix_jacchus
ENSMALG00000000148	sf3a1	99	85.831	ENSCAFG00000012559	SF3A1	100	84.257	Canis_familiaris
ENSMALG00000000148	sf3a1	99	85.831	ENSCAFG00020000838	SF3A1	100	84.257	Canis_lupus_dingo
ENSMALG00000000148	sf3a1	99	86.240	ENSCHIG00000018642	SF3A1	100	84.635	Capra_hircus
ENSMALG00000000148	sf3a1	99	86.104	ENSTSYG00000004739	SF3A1	100	84.509	Carlito_syrichta
ENSMALG00000000148	sf3a1	96	68.627	ENSCAPG00000015414	SF3A1	97	69.624	Cavia_aperea
ENSMALG00000000148	sf3a1	99	86.104	ENSCPOG00000014589	SF3A1	100	84.151	Cavia_porcellus
ENSMALG00000000148	sf3a1	99	85.831	ENSCCAG00000032006	SF3A1	100	84.257	Cebus_capucinus
ENSMALG00000000148	sf3a1	99	86.104	ENSCATG00000029241	SF3A1	100	84.509	Cercocebus_atys
ENSMALG00000000148	sf3a1	99	86.104	ENSCLAG00000006508	SF3A1	100	84.509	Chinchilla_lanigera
ENSMALG00000000148	sf3a1	99	86.104	ENSCSAG00000009470	SF3A1	100	84.509	Chlorocebus_sabaeus
ENSMALG00000000148	sf3a1	57	91.775	ENSCHOG00000005201	SF3A1	64	91.139	Choloepus_hoffmanni
ENSMALG00000000148	sf3a1	99	83.537	ENSCPBG00000007595	SF3A1	100	81.977	Chrysemys_picta_bellii
ENSMALG00000000148	sf3a1	99	51.197	ENSCING00000008526	-	98	52.296	Ciona_intestinalis
ENSMALG00000000148	sf3a1	94	63.158	ENSCSAVG00000005608	-	100	50.000	Ciona_savignyi
ENSMALG00000000148	sf3a1	99	86.104	ENSCANG00000033564	SF3A1	100	84.509	Colobus_angolensis_palliatus
ENSMALG00000000148	sf3a1	99	85.695	ENSCGRG00001008933	Sf3a1	100	84.257	Cricetulus_griseus_chok1gshd
ENSMALG00000000148	sf3a1	99	85.695	ENSCGRG00000006127	Sf3a1	100	84.257	Cricetulus_griseus_crigri
ENSMALG00000000148	sf3a1	100	91.128	ENSCSEG00000010792	sf3a1	100	90.621	Cynoglossus_semilaevis
ENSMALG00000000148	sf3a1	100	91.878	ENSCVAG00000004560	sf3a1	100	91.751	Cyprinodon_variegatus
ENSMALG00000000148	sf3a1	100	87.452	ENSDARG00000041887	sf3a1	100	88.764	Danio_rerio
ENSMALG00000000148	sf3a1	99	86.395	ENSDNOG00000010629	SF3A1	98	83.944	Dasypus_novemcinctus
ENSMALG00000000148	sf3a1	99	85.967	ENSDORG00000005613	Sf3a1	100	84.383	Dipodomys_ordii
ENSMALG00000000148	sf3a1	87	60.155	FBgn0266917	Sf3a1	82	59.889	Drosophila_melanogaster
ENSMALG00000000148	sf3a1	87	83.821	ENSETEG00000017194	SF3A1	95	84.880	Echinops_telfairi
ENSMALG00000000148	sf3a1	99	67.226	ENSEBUG00000001285	sf3a1	95	69.308	Eptatretus_burgeri
ENSMALG00000000148	sf3a1	99	86.104	ENSEASG00005010254	SF3A1	100	84.383	Equus_asinus_asinus
ENSMALG00000000148	sf3a1	99	86.104	ENSECAG00000023962	SF3A1	100	84.383	Equus_caballus
ENSMALG00000000148	sf3a1	78	91.803	ENSEEUG00000003159	SF3A1	82	91.803	Erinaceus_europaeus
ENSMALG00000000148	sf3a1	100	87.358	ENSELUG00000022578	sf3a1	100	87.611	Esox_lucius
ENSMALG00000000148	sf3a1	99	85.967	ENSFCAG00000011932	SF3A1	100	84.383	Felis_catus
ENSMALG00000000148	sf3a1	99	83.265	ENSFALG00000006944	SF3A1	100	82.976	Ficedula_albicollis
ENSMALG00000000148	sf3a1	99	86.240	ENSFDAG00000009560	SF3A1	100	84.635	Fukomys_damarensis
ENSMALG00000000148	sf3a1	100	93.020	ENSFHEG00000010866	sf3a1	100	92.640	Fundulus_heteroclitus
ENSMALG00000000148	sf3a1	100	87.421	ENSGMOG00000016024	sf3a1	100	87.039	Gadus_morhua
ENSMALG00000000148	sf3a1	99	83.946	ENSGALG00000007937	SF3A1	100	83.228	Gallus_gallus
ENSMALG00000000148	sf3a1	100	92.893	ENSGAFG00000009111	sf3a1	100	92.513	Gambusia_affinis
ENSMALG00000000148	sf3a1	100	89.886	ENSGACG00000011893	sf3a1	100	89.254	Gasterosteus_aculeatus
ENSMALG00000000148	sf3a1	96	81.462	ENSGAGG00000000762	SF3A1	99	81.332	Gopherus_agassizii
ENSMALG00000000148	sf3a1	99	86.104	ENSGGOG00000012631	SF3A1	100	84.509	Gorilla_gorilla
ENSMALG00000000148	sf3a1	100	93.774	ENSHBUG00000015795	sf3a1	100	93.011	Haplochromis_burtoni
ENSMALG00000000148	sf3a1	99	86.240	ENSHGLG00000007907	SF3A1	100	84.277	Heterocephalus_glaber_female
ENSMALG00000000148	sf3a1	99	86.240	ENSHGLG00100013799	SF3A1	100	84.277	Heterocephalus_glaber_male
ENSMALG00000000148	sf3a1	100	88.973	ENSHCOG00000015423	sf3a1	100	87.706	Hippocampus_comes
ENSMALG00000000148	sf3a1	99	86.431	ENSIPUG00000002470	sf3a1	98	87.093	Ictalurus_punctatus
ENSMALG00000000148	sf3a1	99	86.240	ENSSTOG00000013892	SF3A1	100	84.635	Ictidomys_tridecemlineatus
ENSMALG00000000148	sf3a1	99	86.104	ENSJJAG00000022566	Sf3a1	100	83.899	Jaculus_jaculus
ENSMALG00000000148	sf3a1	100	92.386	ENSKMAG00000002400	sf3a1	100	92.005	Kryptolebias_marmoratus
ENSMALG00000000148	sf3a1	100	92.005	ENSLBEG00000022974	sf3a1	100	90.863	Labrus_bergylta
ENSMALG00000000148	sf3a1	99	85.598	ENSLACG00000003565	SF3A1	100	84.324	Latimeria_chalumnae
ENSMALG00000000148	sf3a1	100	88.622	ENSLOCG00000008251	sf3a1	99	88.496	Lepisosteus_oculatus
ENSMALG00000000148	sf3a1	99	86.104	ENSLAFG00000000448	SF3A1	100	84.131	Loxodonta_africana
ENSMALG00000000148	sf3a1	99	56.528	ENSLAFG00000026032	-	97	55.641	Loxodonta_africana
ENSMALG00000000148	sf3a1	99	85.967	ENSMFAG00000031979	SF3A1	100	84.383	Macaca_fascicularis
ENSMALG00000000148	sf3a1	99	85.967	ENSMMUG00000005547	SF3A1	100	84.383	Macaca_mulatta
ENSMALG00000000148	sf3a1	99	86.104	ENSMNEG00000037229	SF3A1	100	84.509	Macaca_nemestrina
ENSMALG00000000148	sf3a1	99	86.104	ENSMLEG00000041908	SF3A1	100	84.509	Mandrillus_leucophaeus
ENSMALG00000000148	sf3a1	99	95.504	ENSMAMG00000006460	sf3a1	96	95.300	Mastacembelus_armatus
ENSMALG00000000148	sf3a1	100	93.647	ENSMZEG00005009633	sf3a1	100	92.884	Maylandia_zebra
ENSMALG00000000148	sf3a1	99	83.946	ENSMGAG00000001330	SF3A1	99	85.229	Meleagris_gallopavo
ENSMALG00000000148	sf3a1	99	81.880	ENSMAUG00000020317	Sf3a1	95	81.436	Mesocricetus_auratus
ENSMALG00000000148	sf3a1	99	85.831	ENSMICG00000010038	SF3A1	100	84.257	Microcebus_murinus
ENSMALG00000000148	sf3a1	99	85.831	ENSMOCG00000008438	Sf3a1	100	84.383	Microtus_ochrogaster
ENSMALG00000000148	sf3a1	100	89.721	ENSMMOG00000015588	sf3a1	99	89.340	Mola_mola
ENSMALG00000000148	sf3a1	99	84.196	ENSMODG00000009270	SF3A1	100	83.985	Monodelphis_domestica
ENSMALG00000000148	sf3a1	99	85.695	MGP_CAROLIEiJ_G0016029	Sf3a1	99	83.944	Mus_caroli
ENSMALG00000000148	sf3a1	99	85.695	ENSMUSG00000002129	Sf3a1	99	83.944	Mus_musculus
ENSMALG00000000148	sf3a1	99	85.695	MGP_PahariEiJ_G0016862	Sf3a1	99	83.944	Mus_pahari
ENSMALG00000000148	sf3a1	99	85.695	MGP_SPRETEiJ_G0016870	Sf3a1	99	83.944	Mus_spretus
ENSMALG00000000148	sf3a1	99	85.150	ENSMPUG00000013144	SF3A1	100	84.383	Mustela_putorius_furo
ENSMALG00000000148	sf3a1	99	86.104	ENSMLUG00000002139	SF3A1	100	84.635	Myotis_lucifugus
ENSMALG00000000148	sf3a1	99	86.104	ENSNGAG00000016977	Sf3a1	100	84.383	Nannospalax_galili
ENSMALG00000000148	sf3a1	100	93.901	ENSNBRG00000016642	sf3a1	100	93.139	Neolamprologus_brichardi
ENSMALG00000000148	sf3a1	99	86.104	ENSNLEG00000003686	SF3A1	100	84.509	Nomascus_leucogenys
ENSMALG00000000148	sf3a1	94	76.320	ENSMEUG00000008741	SF3A1	100	75.658	Notamacropus_eugenii
ENSMALG00000000148	sf3a1	99	86.240	ENSOPRG00000016636	SF3A1	100	84.403	Ochotona_princeps
ENSMALG00000000148	sf3a1	99	86.104	ENSODEG00000002571	SF3A1	100	84.363	Octodon_degus
ENSMALG00000000148	sf3a1	100	93.782	ENSONIG00000010848	sf3a1	100	92.640	Oreochromis_niloticus
ENSMALG00000000148	sf3a1	99	85.831	ENSOCUG00000007633	SF3A1	100	84.257	Oryctolagus_cuniculus
ENSMALG00000000148	sf3a1	96	90.728	ENSORLG00000013050	sf3a1	99	90.861	Oryzias_latipes
ENSMALG00000000148	sf3a1	96	91.921	ENSORLG00020003236	sf3a1	95	90.993	Oryzias_latipes_hni
ENSMALG00000000148	sf3a1	99	92.507	ENSORLG00015017411	sf3a1	100	90.609	Oryzias_latipes_hsok
ENSMALG00000000148	sf3a1	100	92.132	ENSOMEG00000013362	sf3a1	100	91.371	Oryzias_melastigma
ENSMALG00000000148	sf3a1	99	85.831	ENSOGAG00000012931	SF3A1	100	83.899	Otolemur_garnettii
ENSMALG00000000148	sf3a1	99	84.741	ENSOARG00000006849	SF3A1	100	82.746	Ovis_aries
ENSMALG00000000148	sf3a1	99	85.286	ENSPPAG00000041790	SF3A1	100	83.753	Pan_paniscus
ENSMALG00000000148	sf3a1	99	85.967	ENSPPRG00000004391	SF3A1	100	84.383	Panthera_pardus
ENSMALG00000000148	sf3a1	99	85.831	ENSPTIG00000000844	SF3A1	99	86.126	Panthera_tigris_altaica
ENSMALG00000000148	sf3a1	99	86.104	ENSPTRG00000014240	SF3A1	100	84.509	Pan_troglodytes
ENSMALG00000000148	sf3a1	99	86.104	ENSPANG00000020772	SF3A1	100	84.509	Papio_anubis
ENSMALG00000000148	sf3a1	83	92.308	ENSPSIG00000012803	SF3A1	98	92.308	Pelodiscus_sinensis
ENSMALG00000000148	sf3a1	99	88.467	ENSPMGG00000023096	sf3a1	100	90.183	Periophthalmus_magnuspinnatus
ENSMALG00000000148	sf3a1	99	85.831	ENSPEMG00000009494	Sf3a1	100	84.383	Peromyscus_maniculatus_bairdii
ENSMALG00000000148	sf3a1	66	80.204	ENSPMAG00000007139	-	95	75.218	Petromyzon_marinus
ENSMALG00000000148	sf3a1	99	84.469	ENSPCIG00000022692	SF3A1	100	83.733	Phascolarctos_cinereus
ENSMALG00000000148	sf3a1	99	87.176	ENSPFOG00000016768	sf3a1	100	83.249	Poecilia_formosa
ENSMALG00000000148	sf3a1	100	93.655	ENSPLAG00000017268	sf3a1	100	93.274	Poecilia_latipinna
ENSMALG00000000148	sf3a1	96	93.976	ENSPMEG00000019811	sf3a1	100	93.223	Poecilia_mexicana
ENSMALG00000000148	sf3a1	100	93.401	ENSPREG00000010347	sf3a1	100	93.274	Poecilia_reticulata
ENSMALG00000000148	sf3a1	99	86.104	ENSPPYG00000011707	SF3A1	100	84.509	Pongo_abelii
ENSMALG00000000148	sf3a1	61	84.298	ENSPCAG00000003266	SF3A1	56	84.298	Procavia_capensis
ENSMALG00000000148	sf3a1	99	85.831	ENSPCOG00000026630	SF3A1	100	84.257	Propithecus_coquereli
ENSMALG00000000148	sf3a1	99	85.014	ENSPVAG00000017719	SF3A1	94	85.791	Pteropus_vampyrus
ENSMALG00000000148	sf3a1	100	93.774	ENSPNYG00000018706	sf3a1	100	93.011	Pundamilia_nyererei
ENSMALG00000000148	sf3a1	99	89.688	ENSPNAG00000003721	sf3a1	99	88.818	Pygocentrus_nattereri
ENSMALG00000000148	sf3a1	99	85.831	ENSRNOG00000005218	Sf3a1	99	84.244	Rattus_norvegicus
ENSMALG00000000148	sf3a1	99	86.104	ENSRBIG00000032167	SF3A1	100	84.509	Rhinopithecus_bieti
ENSMALG00000000148	sf3a1	99	86.104	ENSRROG00000044908	SF3A1	100	84.509	Rhinopithecus_roxellana
ENSMALG00000000148	sf3a1	99	85.695	ENSSBOG00000021960	SF3A1	98	86.145	Saimiri_boliviensis_boliviensis
ENSMALG00000000148	sf3a1	99	81.471	ENSSHAG00000003666	SF3A1	97	83.508	Sarcophilus_harrisii
ENSMALG00000000148	sf3a1	99	90.244	ENSSFOG00015004579	sf3a1	100	90.025	Scleropages_formosus
ENSMALG00000000148	sf3a1	100	90.482	ENSSMAG00000004275	sf3a1	100	89.467	Scophthalmus_maximus
ENSMALG00000000148	sf3a1	100	94.797	ENSSDUG00000022219	sf3a1	100	93.782	Seriola_dumerili
ENSMALG00000000148	sf3a1	100	94.797	ENSSLDG00000012642	sf3a1	100	93.782	Seriola_lalandi_dorsalis
ENSMALG00000000148	sf3a1	99	82.970	ENSSARG00000005960	SF3A1	99	83.377	Sorex_araneus
ENSMALG00000000148	sf3a1	99	83.356	ENSSPUG00000018863	SF3A1	100	83.541	Sphenodon_punctatus
ENSMALG00000000148	sf3a1	100	94.684	ENSSPAG00000011856	sf3a1	100	93.544	Stegastes_partitus
ENSMALG00000000148	sf3a1	99	85.422	ENSSSCG00000010002	SF3A1	100	84.509	Sus_scrofa
ENSMALG00000000148	sf3a1	99	83.853	ENSTGUG00000010547	SF3A1	99	85.267	Taeniopygia_guttata
ENSMALG00000000148	sf3a1	100	88.861	ENSTRUG00000006118	sf3a1	100	87.690	Takifugu_rubripes
ENSMALG00000000148	sf3a1	66	86.861	ENSTNIG00000005713	sf3a1	89	90.265	Tetraodon_nigroviridis
ENSMALG00000000148	sf3a1	99	79.428	ENSTBEG00000012771	SF3A1	100	78.212	Tupaia_belangeri
ENSMALG00000000148	sf3a1	99	85.306	ENSTTRG00000001535	SF3A1	100	83.899	Tursiops_truncatus
ENSMALG00000000148	sf3a1	98	85.027	ENSUAMG00000006750	SF3A1	99	83.503	Ursus_americanus
ENSMALG00000000148	sf3a1	99	85.831	ENSUMAG00000016665	SF3A1	97	86.126	Ursus_maritimus
ENSMALG00000000148	sf3a1	99	85.831	ENSVVUG00000003075	SF3A1	100	84.257	Vulpes_vulpes
ENSMALG00000000148	sf3a1	99	81.497	ENSXETG00000016144	sf3a1	100	79.674	Xenopus_tropicalis
ENSMALG00000000148	sf3a1	100	93.020	ENSXCOG00000015653	sf3a1	100	92.640	Xiphophorus_couchianus
ENSMALG00000000148	sf3a1	100	93.274	ENSXMAG00000002753	sf3a1	100	92.893	Xiphophorus_maculatus