EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000000405 (Gene tree)
Gene ID: 109974614
Gene Symbol: lsm8
Alias: -
Full Name: LSM8 homolog%2C U6 small nuclear RNA associated
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 4531 bases
Position: chrKV885029.1:59085-63615
Accession: 109974614
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000000460	LSM	PF01423.22	6.2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000000494	-	2786	XM_020624903	ENSMALP00000000460	96 (aa)	XP_020480559	UPI0009B45F35

Gene Model

Click here to download ENSMALG00000000405's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb03018	RNA degradation	KEGG
malb03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000000405's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000000405	lsm8	68	33.846	ENSMALG00000001478	lsm1	68	33.846

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000000405	lsm8	100	93.750	ENSG00000128534	LSM8	100	97.333	Homo_sapiens
ENSMALG00000000405	lsm8	100	98.958	ENSAPOG00000008649	lsm8	100	98.958	Acanthochromis_polyacanthus
ENSMALG00000000405	lsm8	100	93.750	ENSAMEG00000001162	LSM8	100	93.750	Ailuropoda_melanoleuca
ENSMALG00000000405	lsm8	78	100.000	ENSACIG00000014694	lsm8	100	100.000	Amphilophus_citrinellus
ENSMALG00000000405	lsm8	100	98.958	ENSAOCG00000013926	lsm8	100	98.958	Amphiprion_ocellaris
ENSMALG00000000405	lsm8	100	98.958	ENSAPEG00000023502	lsm8	100	98.958	Amphiprion_percula
ENSMALG00000000405	lsm8	78	100.000	ENSATEG00000023432	lsm8	100	100.000	Anabas_testudineus
ENSMALG00000000405	lsm8	100	86.869	ENSAPLG00000005115	LSM8	100	86.869	Anas_platyrhynchos
ENSMALG00000000405	lsm8	100	93.750	ENSANAG00000027771	LSM8	100	94.595	Aotus_nancymaae
ENSMALG00000000405	lsm8	100	98.958	ENSACLG00000011253	lsm8	100	98.958	Astatotilapia_calliptera
ENSMALG00000000405	lsm8	100	98.958	ENSAMXG00000042902	lsm8	100	98.958	Astyanax_mexicanus
ENSMALG00000000405	lsm8	100	93.750	ENSBTAG00000012649	LSM8	100	93.750	Bos_taurus
ENSMALG00000000405	lsm8	98	55.319	WBGene00003082	lsm-8	96	55.319	Caenorhabditis_elegans
ENSMALG00000000405	lsm8	100	93.750	ENSCJAG00000046406	LSM8	100	94.595	Callithrix_jacchus
ENSMALG00000000405	lsm8	98	94.681	ENSCAFG00000016459	LSM8	95	94.681	Canis_familiaris
ENSMALG00000000405	lsm8	100	93.750	ENSCAFG00020007643	-	100	93.750	Canis_lupus_dingo
ENSMALG00000000405	lsm8	89	92.941	ENSCAFG00020012800	-	66	92.941	Canis_lupus_dingo
ENSMALG00000000405	lsm8	89	96.471	ENSCHIG00000014201	LSM8	90	96.471	Capra_hircus
ENSMALG00000000405	lsm8	100	93.750	ENSTSYG00000032434	LSM8	100	93.750	Carlito_syrichta
ENSMALG00000000405	lsm8	77	95.946	ENSCAPG00000008253	LSM8	100	95.946	Cavia_aperea
ENSMALG00000000405	lsm8	100	93.750	ENSCPOG00000035673	LSM8	100	93.750	Cavia_porcellus
ENSMALG00000000405	lsm8	100	93.750	ENSCCAG00000021329	LSM8	100	94.595	Cebus_capucinus
ENSMALG00000000405	lsm8	100	93.750	ENSCATG00000045302	LSM8	100	94.595	Cercocebus_atys
ENSMALG00000000405	lsm8	100	93.750	ENSCLAG00000003726	LSM8	100	93.750	Chinchilla_lanigera
ENSMALG00000000405	lsm8	100	93.750	ENSCSAG00000010802	-	100	93.750	Chlorocebus_sabaeus
ENSMALG00000000405	lsm8	100	90.625	ENSCSAG00000019007	-	100	90.625	Chlorocebus_sabaeus
ENSMALG00000000405	lsm8	89	96.471	ENSCPBG00000008154	LSM8	87	96.471	Chrysemys_picta_bellii
ENSMALG00000000405	lsm8	100	73.958	ENSCING00000024877	-	100	73.958	Ciona_intestinalis
ENSMALG00000000405	lsm8	100	93.750	ENSCANG00000040728	LSM8	100	94.595	Colobus_angolensis_palliatus
ENSMALG00000000405	lsm8	100	93.750	ENSCGRG00001000450	Lsm8	100	93.750	Cricetulus_griseus_chok1gshd
ENSMALG00000000405	lsm8	89	96.471	ENSCGRG00000005587	Lsm8	100	96.471	Cricetulus_griseus_crigri
ENSMALG00000000405	lsm8	100	86.458	ENSCSEG00000004164	lsm8	100	86.458	Cynoglossus_semilaevis
ENSMALG00000000405	lsm8	100	97.917	ENSCVAG00000020547	lsm8	100	97.917	Cyprinodon_variegatus
ENSMALG00000000405	lsm8	100	95.833	ENSDARG00000091656	lsm8	100	95.833	Danio_rerio
ENSMALG00000000405	lsm8	100	93.750	ENSDNOG00000034613	LSM8	100	93.750	Dasypus_novemcinctus
ENSMALG00000000405	lsm8	100	93.750	ENSDORG00000027868	Lsm8	100	93.750	Dipodomys_ordii
ENSMALG00000000405	lsm8	98	71.277	FBgn0035271	CG2021	99	71.277	Drosophila_melanogaster
ENSMALG00000000405	lsm8	100	94.792	ENSETEG00000011594	LSM8	100	94.792	Echinops_telfairi
ENSMALG00000000405	lsm8	77	93.243	ENSEBUG00000012017	lsm8	100	93.243	Eptatretus_burgeri
ENSMALG00000000405	lsm8	100	93.750	ENSEASG00005008932	LSM8	62	93.750	Equus_asinus_asinus
ENSMALG00000000405	lsm8	89	96.471	ENSECAG00000024025	LSM8	77	96.471	Equus_caballus
ENSMALG00000000405	lsm8	100	94.792	ENSELUG00000010138	lsm8	100	94.792	Esox_lucius
ENSMALG00000000405	lsm8	100	93.750	ENSFCAG00000036620	-	100	93.750	Felis_catus
ENSMALG00000000405	lsm8	84	74.074	ENSFCAG00000044794	-	82	74.074	Felis_catus
ENSMALG00000000405	lsm8	100	94.792	ENSFALG00000010023	LSM8	100	94.792	Ficedula_albicollis
ENSMALG00000000405	lsm8	100	93.750	ENSFDAG00000019530	LSM8	100	93.750	Fukomys_damarensis
ENSMALG00000000405	lsm8	100	98.958	ENSFHEG00000013729	lsm8	100	98.958	Fundulus_heteroclitus
ENSMALG00000000405	lsm8	100	94.792	ENSGALG00000009110	LSM8	100	94.792	Gallus_gallus
ENSMALG00000000405	lsm8	100	97.917	ENSGAFG00000001135	lsm8	100	97.917	Gambusia_affinis
ENSMALG00000000405	lsm8	100	93.750	ENSGAGG00000017366	LSM8	100	93.750	Gopherus_agassizii
ENSMALG00000000405	lsm8	100	93.750	ENSGGOG00000041883	LSM8	100	93.750	Gorilla_gorilla
ENSMALG00000000405	lsm8	100	98.958	ENSHBUG00000003646	lsm8	100	98.958	Haplochromis_burtoni
ENSMALG00000000405	lsm8	71	94.118	ENSHGLG00000001988	-	99	94.118	Heterocephalus_glaber_female
ENSMALG00000000405	lsm8	100	87.500	ENSHGLG00000019782	-	100	87.500	Heterocephalus_glaber_female
ENSMALG00000000405	lsm8	98	92.553	ENSHGLG00100003934	-	94	92.553	Heterocephalus_glaber_male
ENSMALG00000000405	lsm8	100	89.583	ENSHGLG00100012166	-	100	89.583	Heterocephalus_glaber_male
ENSMALG00000000405	lsm8	100	97.917	ENSHCOG00000005037	lsm8	100	97.917	Hippocampus_comes
ENSMALG00000000405	lsm8	100	98.958	ENSIPUG00000019811	NAA38	100	98.958	Ictalurus_punctatus
ENSMALG00000000405	lsm8	92	84.091	ENSSTOG00000034801	-	81	84.091	Ictidomys_tridecemlineatus
ENSMALG00000000405	lsm8	100	93.750	ENSSTOG00000009039	LSM8	100	93.750	Ictidomys_tridecemlineatus
ENSMALG00000000405	lsm8	100	93.750	ENSJJAG00000009031	Lsm8	99	93.750	Jaculus_jaculus
ENSMALG00000000405	lsm8	100	98.958	ENSKMAG00000018983	lsm8	100	98.958	Kryptolebias_marmoratus
ENSMALG00000000405	lsm8	100	92.708	ENSLACG00000010231	LSM8	100	92.708	Latimeria_chalumnae
ENSMALG00000000405	lsm8	100	97.917	ENSLOCG00000015580	lsm8	100	97.917	Lepisosteus_oculatus
ENSMALG00000000405	lsm8	100	92.784	ENSLAFG00000011242	LSM8	100	92.784	Loxodonta_africana
ENSMALG00000000405	lsm8	100	93.750	ENSMFAG00000035798	LSM8	100	94.595	Macaca_fascicularis
ENSMALG00000000405	lsm8	100	90.625	ENSMFAG00000013044	-	100	90.625	Macaca_fascicularis
ENSMALG00000000405	lsm8	100	93.750	ENSMMUG00000046401	LSM8	100	94.595	Macaca_mulatta
ENSMALG00000000405	lsm8	78	94.667	ENSMNEG00000011141	-	100	94.667	Macaca_nemestrina
ENSMALG00000000405	lsm8	100	93.750	ENSMNEG00000036764	-	100	94.595	Macaca_nemestrina
ENSMALG00000000405	lsm8	100	93.750	ENSMLEG00000035828	-	100	94.595	Mandrillus_leucophaeus
ENSMALG00000000405	lsm8	100	79.167	ENSMLEG00000039324	-	100	79.167	Mandrillus_leucophaeus
ENSMALG00000000405	lsm8	78	100.000	ENSMAMG00000018839	lsm8	100	100.000	Mastacembelus_armatus
ENSMALG00000000405	lsm8	100	98.958	ENSMZEG00005019138	lsm8	100	98.958	Maylandia_zebra
ENSMALG00000000405	lsm8	100	94.792	ENSMGAG00000008808	LSM8	100	94.792	Meleagris_gallopavo
ENSMALG00000000405	lsm8	75	90.278	ENSMAUG00000020287	-	100	87.838	Mesocricetus_auratus
ENSMALG00000000405	lsm8	100	75.000	ENSMAUG00000015356	-	100	75.000	Mesocricetus_auratus
ENSMALG00000000405	lsm8	100	87.500	ENSMAUG00000015721	-	100	87.500	Mesocricetus_auratus
ENSMALG00000000405	lsm8	100	93.750	ENSMICG00000042730	LSM8	100	93.750	Microcebus_murinus
ENSMALG00000000405	lsm8	100	93.750	ENSMOCG00000001688	Lsm8	100	93.750	Microtus_ochrogaster
ENSMALG00000000405	lsm8	78	100.000	ENSMMOG00000006046	lsm8	100	100.000	Mola_mola
ENSMALG00000000405	lsm8	76	85.333	ENSMODG00000015729	LSM8	96	85.333	Monodelphis_domestica
ENSMALG00000000405	lsm8	100	93.750	MGP_CAROLIEiJ_G0028125	-	100	93.750	Mus_caroli
ENSMALG00000000405	lsm8	100	93.750	ENSMUSG00000044155	Lsm8	100	93.750	Mus_musculus
ENSMALG00000000405	lsm8	100	93.750	MGP_PahariEiJ_G0021881	Lsm8	100	97.333	Mus_pahari
ENSMALG00000000405	lsm8	100	93.750	MGP_SPRETEiJ_G0029125	-	100	93.750	Mus_spretus
ENSMALG00000000405	lsm8	100	93.750	ENSMLUG00000006837	-	100	93.750	Myotis_lucifugus
ENSMALG00000000405	lsm8	100	92.708	ENSMLUG00000027762	-	100	92.708	Myotis_lucifugus
ENSMALG00000000405	lsm8	100	93.750	ENSNGAG00000016554	Lsm8	100	93.750	Nannospalax_galili
ENSMALG00000000405	lsm8	100	98.958	ENSNBRG00000014441	lsm8	100	98.958	Neolamprologus_brichardi
ENSMALG00000000405	lsm8	100	93.750	ENSNLEG00000011768	LSM8	100	93.750	Nomascus_leucogenys
ENSMALG00000000405	lsm8	100	82.292	ENSMEUG00000007801	LSM8	100	82.292	Notamacropus_eugenii
ENSMALG00000000405	lsm8	89	96.471	ENSOPRG00000014809	LSM8	100	96.471	Ochotona_princeps
ENSMALG00000000405	lsm8	100	93.750	ENSODEG00000000418	-	100	93.750	Octodon_degus
ENSMALG00000000405	lsm8	90	76.744	ENSODEG00000020290	-	100	76.744	Octodon_degus
ENSMALG00000000405	lsm8	100	92.708	ENSOANG00000014536	LSM8	100	92.708	Ornithorhynchus_anatinus
ENSMALG00000000405	lsm8	100	92.784	ENSOCUG00000017359	LSM8	100	92.784	Oryctolagus_cuniculus
ENSMALG00000000405	lsm8	100	87.500	ENSORLG00000017432	lsm8	100	87.500	Oryzias_latipes
ENSMALG00000000405	lsm8	100	87.500	ENSORLG00020004376	lsm8	100	87.500	Oryzias_latipes_hni
ENSMALG00000000405	lsm8	100	98.958	ENSORLG00015003757	lsm8	100	98.958	Oryzias_latipes_hsok
ENSMALG00000000405	lsm8	100	85.417	ENSOMEG00000022509	lsm8	100	86.458	Oryzias_melastigma
ENSMALG00000000405	lsm8	100	93.750	ENSOGAG00000013377	LSM8	100	93.750	Otolemur_garnettii
ENSMALG00000000405	lsm8	100	93.750	ENSOARG00000017974	LSM8	100	93.750	Ovis_aries
ENSMALG00000000405	lsm8	78	97.333	ENSPPAG00000043228	-	100	97.333	Pan_paniscus
ENSMALG00000000405	lsm8	100	93.750	ENSPPRG00000006444	LSM8	100	93.750	Panthera_pardus
ENSMALG00000000405	lsm8	100	93.750	ENSPTIG00000004722	LSM8	100	93.750	Panthera_tigris_altaica
ENSMALG00000000405	lsm8	78	97.333	ENSPTRG00000046596	-	100	97.333	Pan_troglodytes
ENSMALG00000000405	lsm8	100	88.542	ENSPANG00000019395	-	100	88.542	Papio_anubis
ENSMALG00000000405	lsm8	100	93.750	ENSPANG00000035470	-	100	94.595	Papio_anubis
ENSMALG00000000405	lsm8	89	96.471	ENSPKIG00000006092	lsm8	86	96.471	Paramormyrops_kingsleyae
ENSMALG00000000405	lsm8	78	97.333	ENSPSIG00000017054	LSM8	100	97.333	Pelodiscus_sinensis
ENSMALG00000000405	lsm8	78	100.000	ENSPMGG00000016442	lsm8	100	100.000	Periophthalmus_magnuspinnatus
ENSMALG00000000405	lsm8	77	94.595	ENSPEMG00000009153	Lsm8	100	94.595	Peromyscus_maniculatus_bairdii
ENSMALG00000000405	lsm8	97	94.624	ENSPCIG00000021467	LSM8	98	94.624	Phascolarctos_cinereus
ENSMALG00000000405	lsm8	100	97.917	ENSPFOG00000012340	lsm8	100	97.917	Poecilia_formosa
ENSMALG00000000405	lsm8	100	88.542	ENSPLAG00000000516	lsm8	100	88.542	Poecilia_latipinna
ENSMALG00000000405	lsm8	100	97.917	ENSPMEG00000022567	lsm8	100	97.917	Poecilia_mexicana
ENSMALG00000000405	lsm8	76	87.500	ENSPREG00000005527	lsm8	72	87.500	Poecilia_reticulata
ENSMALG00000000405	lsm8	100	93.750	ENSPPYG00000017942	LSM8	100	93.750	Pongo_abelii
ENSMALG00000000405	lsm8	100	93.750	ENSPCOG00000003309	-	100	93.750	Propithecus_coquereli
ENSMALG00000000405	lsm8	97	74.194	ENSPCOG00000017982	-	97	74.194	Propithecus_coquereli
ENSMALG00000000405	lsm8	89	95.294	ENSPVAG00000000990	LSM8	100	95.294	Pteropus_vampyrus
ENSMALG00000000405	lsm8	100	98.958	ENSPNYG00000011448	lsm8	100	98.958	Pundamilia_nyererei
ENSMALG00000000405	lsm8	100	98.958	ENSPNAG00000010252	lsm8	100	98.958	Pygocentrus_nattereri
ENSMALG00000000405	lsm8	100	93.750	ENSRNOG00000058677	Lsm8	100	93.750	Rattus_norvegicus
ENSMALG00000000405	lsm8	100	93.750	ENSRBIG00000032851	LSM8	100	94.595	Rhinopithecus_bieti
ENSMALG00000000405	lsm8	100	93.750	ENSRROG00000039618	LSM8	100	94.595	Rhinopithecus_roxellana
ENSMALG00000000405	lsm8	100	93.750	ENSSBOG00000023223	LSM8	100	94.595	Saimiri_boliviensis_boliviensis
ENSMALG00000000405	lsm8	100	93.750	ENSSHAG00000018435	-	100	93.750	Sarcophilus_harrisii
ENSMALG00000000405	lsm8	100	95.833	ENSSFOG00015004412	lsm8	100	95.833	Scleropages_formosus
ENSMALG00000000405	lsm8	78	97.333	ENSSMAG00000009458	lsm8	100	97.333	Scophthalmus_maximus
ENSMALG00000000405	lsm8	100	98.958	ENSSDUG00000014702	lsm8	100	98.958	Seriola_dumerili
ENSMALG00000000405	lsm8	78	100.000	ENSSLDG00000016870	lsm8	100	100.000	Seriola_lalandi_dorsalis
ENSMALG00000000405	lsm8	75	97.222	ENSSARG00000009628	-	100	97.222	Sorex_araneus
ENSMALG00000000405	lsm8	100	93.750	ENSSPUG00000017419	LSM8	100	93.750	Sphenodon_punctatus
ENSMALG00000000405	lsm8	100	98.958	ENSSPAG00000021422	lsm8	100	98.958	Stegastes_partitus
ENSMALG00000000405	lsm8	100	93.750	ENSSSCG00000021652	LSM8	100	93.750	Sus_scrofa
ENSMALG00000000405	lsm8	100	94.792	ENSTGUG00000004730	-	100	94.792	Taeniopygia_guttata
ENSMALG00000000405	lsm8	100	93.750	ENSTGUG00000016823	-	100	93.750	Taeniopygia_guttata
ENSMALG00000000405	lsm8	100	98.958	ENSTRUG00000025192	lsm8	100	98.958	Takifugu_rubripes
ENSMALG00000000405	lsm8	100	98.958	ENSTNIG00000002864	lsm8	100	98.958	Tetraodon_nigroviridis
ENSMALG00000000405	lsm8	100	93.750	ENSTTRG00000001023	LSM8	100	93.750	Tursiops_truncatus
ENSMALG00000000405	lsm8	92	93.182	ENSUAMG00000006943	-	92	93.182	Ursus_americanus
ENSMALG00000000405	lsm8	92	93.182	ENSUMAG00000003073	LSM8	94	93.182	Ursus_maritimus
ENSMALG00000000405	lsm8	100	93.750	ENSVPAG00000001530	LSM8	100	93.750	Vicugna_pacos
ENSMALG00000000405	lsm8	78	94.667	ENSVVUG00000013248	-	82	94.667	Vulpes_vulpes
ENSMALG00000000405	lsm8	93	95.506	ENSXETG00000021829	lsm8	92	95.506	Xenopus_tropicalis
ENSMALG00000000405	lsm8	100	95.833	ENSXCOG00000012938	lsm8	100	95.833	Xiphophorus_couchianus
ENSMALG00000000405	lsm8	100	97.917	ENSXMAG00000025919	lsm8	100	97.917	Xiphophorus_maculatus