EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000000462 (Gene tree)
Gene ID: 109952948
Gene Symbol: -
Alias: -
Full Name: PR domain zinc finger protein 1-like
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 8114 bases
Position: chrKV884697.1:601187-609300
Accession: 109952948
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000000563	zf-C2H2	PF00096.26	1.2e-17	1	3
ENSMALP00000000563	zf-C2H2	PF00096.26	1.2e-17	2	3
ENSMALP00000000563	zf-C2H2	PF00096.26	1.2e-17	3	3
ENSMALP00000000563	zf-met	PF12874.7	5.2e-05	1	2
ENSMALP00000000563	zf-met	PF12874.7	5.2e-05	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000000598	-	2564	XM_020588274	ENSMALP00000000563	768 (aa)	XP_020443930	UPI0009B30058

Gene Model

Click here to download ENSMALG00000000462's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000000462's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000000462	-	99	76.853	ENSAPOG00000014135	-	98	76.853	Acanthochromis_polyacanthus
ENSMALG00000000462	-	99	73.800	ENSACIG00000009747	-	98	73.800	Amphilophus_citrinellus
ENSMALG00000000462	-	57	55.828	ENSAPEG00000019826	prdm1b	57	61.429	Amphiprion_percula
ENSMALG00000000462	-	95	36.407	ENSATEG00000021017	prdm1a	97	45.817	Anabas_testudineus
ENSMALG00000000462	-	99	78.340	ENSATEG00000014034	-	99	78.340	Anabas_testudineus
ENSMALG00000000462	-	97	44.652	ENSCSEG00000009707	prdm1a	99	44.913	Cynoglossus_semilaevis
ENSMALG00000000462	-	95	45.513	ENSCVAG00000019081	prdm1a	97	44.987	Cyprinodon_variegatus
ENSMALG00000000462	-	55	56.442	ENSCVAG00000016746	prdm1b	60	56.442	Cyprinodon_variegatus
ENSMALG00000000462	-	100	65.285	ENSGAFG00000013012	-	100	65.285	Gambusia_affinis
ENSMALG00000000462	-	89	41.004	ENSGAFG00000016191	prdm1b	87	41.004	Gambusia_affinis
ENSMALG00000000462	-	54	55.488	ENSGACG00000002716	prdm1b	59	55.488	Gasterosteus_aculeatus
ENSMALG00000000462	-	53	56.202	ENSIPUG00000013740	prdm1b	60	56.641	Ictalurus_punctatus
ENSMALG00000000462	-	100	69.819	ENSKMAG00000016247	-	98	69.819	Kryptolebias_marmoratus
ENSMALG00000000462	-	95	44.083	ENSKMAG00000017597	prdm1a	95	43.506	Kryptolebias_marmoratus
ENSMALG00000000462	-	78	37.739	ENSKMAG00000011218	prdm1b	89	37.825	Kryptolebias_marmoratus
ENSMALG00000000462	-	54	56.790	ENSLBEG00000020955	prdm1b	52	62.857	Labrus_bergylta
ENSMALG00000000462	-	63	56.228	ENSLOCG00000004978	prdm1b	60	56.228	Lepisosteus_oculatus
ENSMALG00000000462	-	57	54.348	ENSONIG00000013583	prdm1b	61	54.348	Oreochromis_niloticus
ENSMALG00000000462	-	99	72.374	ENSONIG00000014709	-	98	72.374	Oreochromis_niloticus
ENSMALG00000000462	-	58	54.795	ENSPKIG00000022335	prdm1b	68	54.795	Paramormyrops_kingsleyae
ENSMALG00000000462	-	57	55.159	ENSPFOG00000003103	prdm1b	67	55.159	Poecilia_formosa
ENSMALG00000000462	-	54	56.442	ENSPREG00000011327	prdm1b	52	61.972	Poecilia_reticulata
ENSMALG00000000462	-	96	42.377	ENSPVAG00000011732	PRDM1	99	42.497	Pteropus_vampyrus
ENSMALG00000000462	-	93	44.928	ENSPNAG00000028442	prdm1a	90	44.928	Pygocentrus_nattereri
ENSMALG00000000462	-	61	53.374	ENSSFOG00015021896	prdm1b	70	53.374	Scleropages_formosus
ENSMALG00000000462	-	57	56.442	ENSSMAG00000020467	prdm1b	91	38.482	Scophthalmus_maximus
ENSMALG00000000462	-	99	76.265	ENSSMAG00000017518	-	98	76.265	Scophthalmus_maximus
ENSMALG00000000462	-	99	80.181	ENSSDUG00000000524	-	98	80.181	Seriola_dumerili
ENSMALG00000000462	-	99	79.922	ENSSLDG00000001957	-	98	79.922	Seriola_lalandi_dorsalis
ENSMALG00000000462	-	55	57.669	ENSSLDG00000021973	prdm1b	55	62.857	Seriola_lalandi_dorsalis
ENSMALG00000000462	-	99	77.361	ENSSPAG00000009830	-	98	77.361	Stegastes_partitus
ENSMALG00000000462	-	92	40.000	ENSXCOG00000018920	prdm1b	88	40.000	Xiphophorus_couchianus
ENSMALG00000000462	-	92	40.000	ENSXMAG00000016765	prdm1b	88	40.000	Xiphophorus_maculatus