EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000000691 (Gene tree)
Gene ID: 109952962
Gene Symbol: pcbp3
Alias: -
Full Name: poly(rC) binding protein 3
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 11189 bases
Position: chrKV885211.1:18582-29770
Accession: 109952962
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000001266	KH_1	PF00013.29	1.9e-50	1	3
ENSMALP00000001266	KH_1	PF00013.29	1.9e-50	2	3
ENSMALP00000001266	KH_1	PF00013.29	1.9e-50	3	3
ENSMALP00000001351	KH_1	PF00013.29	7.8e-49	1	3
ENSMALP00000001351	KH_1	PF00013.29	7.8e-49	2	3
ENSMALP00000001351	KH_1	PF00013.29	7.8e-49	3	3
ENSMALP00000001458	KH_1	PF00013.29	8.8e-49	1	3
ENSMALP00000001458	KH_1	PF00013.29	8.8e-49	2	3
ENSMALP00000001458	KH_1	PF00013.29	8.8e-49	3	3
ENSMALP00000001438	KH_1	PF00013.29	9.2e-47	1	3
ENSMALP00000001438	KH_1	PF00013.29	9.2e-47	2	3
ENSMALP00000001438	KH_1	PF00013.29	9.2e-47	3	3
ENSMALP00000001398	KH_1	PF00013.29	2.4e-43	1	3
ENSMALP00000001398	KH_1	PF00013.29	2.4e-43	2	3
ENSMALP00000001398	KH_1	PF00013.29	2.4e-43	3	3
ENSMALP00000001302	KH_1	PF00013.29	3.2e-35	1	2
ENSMALP00000001302	KH_1	PF00013.29	3.2e-35	2	2
ENSMALP00000001266	KH_2	PF07650.17	2.3e-11	1	1
ENSMALP00000001458	KH_2	PF07650.17	1.6e-10	1	1
ENSMALP00000001351	KH_2	PF07650.17	1.9e-10	1	1
ENSMALP00000001438	KH_2	PF07650.17	1.3e-09	1	1
ENSMALP00000001398	KH_2	PF07650.17	2.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000001444	-	876	-	ENSMALP00000001398	291 (aa)	-	-
ENSMALT00000001484	-	942	-	ENSMALP00000001438	313 (aa)	-	-
ENSMALT00000001310	-	1029	XM_020588287	ENSMALP00000001266	342 (aa)	XP_020443943	-
ENSMALT00000001397	-	909	-	ENSMALP00000001351	302 (aa)	-	-
ENSMALT00000001507	-	912	-	ENSMALP00000001458	303 (aa)	-	-
ENSMALT00000001347	-	972	-	ENSMALP00000001302	323 (aa)	-	-

Gene Model

Click here to download ENSMALG00000000691's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000000691's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000000691	pcbp3	87	59.406	ENSMALG00000022117	-	74	59.406
ENSMALG00000000691	pcbp3	98	73.154	ENSMALG00000022422	pcbp2	98	72.000
ENSMALG00000000691	pcbp3	91	34.848	ENSMALG00000004958	KHSRP	53	34.848
ENSMALG00000000691	pcbp3	97	62.215	ENSMALG00000020318	pcbp4	72	60.000
ENSMALG00000000691	pcbp3	99	71.711	ENSMALG00000009673	PCBP2	98	71.711
ENSMALG00000000691	pcbp3	93	79.429	ENSMALG00000008763	zgc:110045	86	81.287
ENSMALG00000000691	pcbp3	89	35.172	ENSMALG00000016964	igf2bp2b	71	34.932
ENSMALG00000000691	pcbp3	80	50.847	ENSMALG00000010153	hnrnpk	50	55.556
ENSMALG00000000691	pcbp3	61	39.062	ENSMALG00000010432	-	75	37.313
ENSMALG00000000691	pcbp3	90	38.462	ENSMALG00000021819	FUBP3	66	40.580
ENSMALG00000000691	pcbp3	74	55.556	ENSMALG00000003681	hnrpkl	53	55.556
ENSMALG00000000691	pcbp3	88	41.667	ENSMALG00000005081	nova1	79	31.210

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000000691	pcbp3	96	91.515	ENSAPOG00000020003	pcbp3	87	91.515	Acanthochromis_polyacanthus
ENSMALG00000000691	pcbp3	100	88.604	ENSAPOG00000016582	-	100	88.604	Acanthochromis_polyacanthus
ENSMALG00000000691	pcbp3	93	85.119	ENSAMEG00000001697	-	95	85.119	Ailuropoda_melanoleuca
ENSMALG00000000691	pcbp3	100	98.261	ENSACIG00000010933	pcbp3	100	98.261	Amphilophus_citrinellus
ENSMALG00000000691	pcbp3	95	90.000	ENSACIG00000002739	-	96	90.000	Amphilophus_citrinellus
ENSMALG00000000691	pcbp3	95	90.390	ENSAOCG00000008592	-	97	90.390	Amphiprion_ocellaris
ENSMALG00000000691	pcbp3	86	85.855	ENSAOCG00000007806	-	96	85.855	Amphiprion_ocellaris
ENSMALG00000000691	pcbp3	98	85.577	ENSAPEG00000005209	-	96	88.520	Amphiprion_percula
ENSMALG00000000691	pcbp3	100	97.159	ENSAPEG00000008011	pcbp3	100	97.159	Amphiprion_percula
ENSMALG00000000691	pcbp3	95	99.692	ENSATEG00000015787	-	99	99.692	Anabas_testudineus
ENSMALG00000000691	pcbp3	95	89.634	ENSATEG00000009833	-	96	89.634	Anabas_testudineus
ENSMALG00000000691	pcbp3	98	75.749	ENSAPLG00000008951	-	82	75.749	Anas_platyrhynchos
ENSMALG00000000691	pcbp3	98	79.567	ENSAPLG00000002975	-	95	83.776	Anas_platyrhynchos
ENSMALG00000000691	pcbp3	93	88.986	ENSACAG00000004607	-	95	88.986	Anolis_carolinensis
ENSMALG00000000691	pcbp3	93	84.356	ENSACAG00000009819	-	94	84.356	Anolis_carolinensis
ENSMALG00000000691	pcbp3	91	71.193	ENSANAG00000030702	-	96	87.732	Aotus_nancymaae
ENSMALG00000000691	pcbp3	100	88.034	ENSACLG00000003801	-	100	88.034	Astatotilapia_calliptera
ENSMALG00000000691	pcbp3	100	96.307	ENSACLG00000011835	pcbp3	100	96.307	Astatotilapia_calliptera
ENSMALG00000000691	pcbp3	98	64.326	ENSAMXG00000001760	zgc:110045	76	64.326	Astyanax_mexicanus
ENSMALG00000000691	pcbp3	100	94.587	ENSAMXG00000003440	pcbp3	100	94.587	Astyanax_mexicanus
ENSMALG00000000691	pcbp3	95	87.692	ENSAMXG00000013588	-	99	87.692	Astyanax_mexicanus
ENSMALG00000000691	pcbp3	93	94.030	ENSCAFG00020019472	-	76	93.458	Canis_lupus_dingo
ENSMALG00000000691	pcbp3	98	83.871	ENSCSAG00000007440	-	86	86.810	Chlorocebus_sabaeus
ENSMALG00000000691	pcbp3	98	83.412	ENSCPBG00000000733	-	76	80.347	Chrysemys_picta_bellii
ENSMALG00000000691	pcbp3	96	85.075	ENSCPBG00000012151	-	93	85.075	Chrysemys_picta_bellii
ENSMALG00000000691	pcbp3	93	93.583	ENSCSEG00000000822	pcbp3	100	89.970	Cynoglossus_semilaevis
ENSMALG00000000691	pcbp3	93	91.892	ENSCSEG00000016984	-	97	73.373	Cynoglossus_semilaevis
ENSMALG00000000691	pcbp3	100	88.034	ENSCVAG00000005262	-	100	88.034	Cyprinodon_variegatus
ENSMALG00000000691	pcbp3	100	96.875	ENSCVAG00000014482	pcbp3	100	96.875	Cyprinodon_variegatus
ENSMALG00000000691	pcbp3	100	94.872	ENSDARG00000054378	pcbp3	100	94.872	Danio_rerio
ENSMALG00000000691	pcbp3	98	71.935	ENSETEG00000015988	-	95	75.460	Echinops_telfairi
ENSMALG00000000691	pcbp3	85	68.966	ENSEBUG00000016192	pcbp3	99	68.966	Eptatretus_burgeri
ENSMALG00000000691	pcbp3	93	81.579	ENSEBUG00000007485	-	92	70.661	Eptatretus_burgeri
ENSMALG00000000691	pcbp3	93	65.438	ENSEBUG00000005495	pcbp3	67	66.816	Eptatretus_burgeri
ENSMALG00000000691	pcbp3	100	95.751	ENSELUG00000003521	pcbp3	100	95.751	Esox_lucius
ENSMALG00000000691	pcbp3	100	88.319	ENSELUG00000001560	-	97	86.880	Esox_lucius
ENSMALG00000000691	pcbp3	98	83.819	ENSFALG00000003949	-	95	86.503	Ficedula_albicollis
ENSMALG00000000691	pcbp3	98	76.022	ENSFALG00000004411	-	77	76.022	Ficedula_albicollis
ENSMALG00000000691	pcbp3	95	92.308	ENSFHEG00000016615	pcbp3	95	92.308	Fundulus_heteroclitus
ENSMALG00000000691	pcbp3	98	85.852	ENSFHEG00000006539	-	96	88.520	Fundulus_heteroclitus
ENSMALG00000000691	pcbp3	94	66.761	ENSGMOG00000008611	-	99	66.761	Gadus_morhua
ENSMALG00000000691	pcbp3	96	74.359	ENSGMOG00000011992	pcbp3	95	76.299	Gadus_morhua
ENSMALG00000000691	pcbp3	95	85.185	ENSGALG00000013155	-	99	85.185	Gallus_gallus
ENSMALG00000000691	pcbp3	93	88.630	ENSGALG00000004394	-	95	88.630	Gallus_gallus
ENSMALG00000000691	pcbp3	100	88.034	ENSGAFG00000010274	-	100	88.034	Gambusia_affinis
ENSMALG00000000691	pcbp3	98	94.412	ENSGAFG00000011430	pcbp3	98	94.412	Gambusia_affinis
ENSMALG00000000691	pcbp3	96	81.073	ENSGACG00000014955	-	97	81.073	Gasterosteus_aculeatus
ENSMALG00000000691	pcbp3	95	82.621	ENSGACG00000002266	-	96	82.621	Gasterosteus_aculeatus
ENSMALG00000000691	pcbp3	85	81.100	ENSGAGG00000000271	-	100	81.100	Gopherus_agassizii
ENSMALG00000000691	pcbp3	88	89.720	ENSGAGG00000006956	-	86	90.821	Gopherus_agassizii
ENSMALG00000000691	pcbp3	100	88.034	ENSHBUG00000021782	-	100	88.034	Haplochromis_burtoni
ENSMALG00000000691	pcbp3	100	96.307	ENSHBUG00000010697	pcbp3	100	96.307	Haplochromis_burtoni
ENSMALG00000000691	pcbp3	98	86.557	ENSHCOG00000006067	-	97	86.557	Hippocampus_comes
ENSMALG00000000691	pcbp3	100	97.151	ENSHCOG00000017868	pcbp3	100	97.151	Hippocampus_comes
ENSMALG00000000691	pcbp3	95	93.994	ENSIPUG00000006238	pcbp3	97	93.994	Ictalurus_punctatus
ENSMALG00000000691	pcbp3	100	87.179	ENSKMAG00000018530	-	100	87.179	Kryptolebias_marmoratus
ENSMALG00000000691	pcbp3	100	96.875	ENSKMAG00000003046	pcbp3	100	96.875	Kryptolebias_marmoratus
ENSMALG00000000691	pcbp3	95	91.437	ENSLBEG00000006201	pcbp3	95	91.437	Labrus_bergylta
ENSMALG00000000691	pcbp3	100	77.874	ENSLBEG00000006542	-	100	80.172	Labrus_bergylta
ENSMALG00000000691	pcbp3	98	75.824	ENSLACG00000010804	zgc:110045	77	75.824	Latimeria_chalumnae
ENSMALG00000000691	pcbp3	93	86.819	ENSLACG00000010386	pcbp3	73	86.819	Latimeria_chalumnae
ENSMALG00000000691	pcbp3	93	83.742	ENSLOCG00000005058	zgc:110045	79	83.742	Lepisosteus_oculatus
ENSMALG00000000691	pcbp3	93	93.865	ENSLOCG00000009369	pcbp3	95	93.865	Lepisosteus_oculatus
ENSMALG00000000691	pcbp3	95	88.415	ENSMAMG00000011620	-	96	88.415	Mastacembelus_armatus
ENSMALG00000000691	pcbp3	95	92.308	ENSMAMG00000022336	pcbp3	93	92.308	Mastacembelus_armatus
ENSMALG00000000691	pcbp3	100	96.296	ENSMZEG00005008993	pcbp3	100	96.296	Maylandia_zebra
ENSMALG00000000691	pcbp3	100	88.921	ENSMZEG00005014882	-	100	89.017	Maylandia_zebra
ENSMALG00000000691	pcbp3	98	76.022	ENSMGAG00000006794	-	77	76.022	Meleagris_gallopavo
ENSMALG00000000691	pcbp3	94	78.161	ENSMGAG00000001883	-	96	78.161	Meleagris_gallopavo
ENSMALG00000000691	pcbp3	95	89.846	ENSMMOG00000005216	-	96	89.846	Mola_mola
ENSMALG00000000691	pcbp3	95	88.060	ENSMMOG00000000730	pcbp3	87	88.060	Mola_mola
ENSMALG00000000691	pcbp3	73	86.449	ENSMODG00000027884	-	93	86.449	Monodelphis_domestica
ENSMALG00000000691	pcbp3	98	76.453	ENSMPUG00000001779	-	87	79.360	Mustela_putorius_furo
ENSMALG00000000691	pcbp3	100	98.542	ENSNBRG00000016409	-	100	98.542	Neolamprologus_brichardi
ENSMALG00000000691	pcbp3	100	91.954	ENSNBRG00000016714	-	100	91.954	Neolamprologus_brichardi
ENSMALG00000000691	pcbp3	93	88.824	ENSOPRG00000003431	-	99	88.824	Ochotona_princeps
ENSMALG00000000691	pcbp3	96	90.730	ENSONIG00000012122	-	98	90.730	Oreochromis_niloticus
ENSMALG00000000691	pcbp3	95	87.688	ENSONIG00000004611	-	96	87.688	Oreochromis_niloticus
ENSMALG00000000691	pcbp3	98	83.819	ENSOCUG00000002696	-	86	86.196	Oryctolagus_cuniculus
ENSMALG00000000691	pcbp3	95	90.390	ENSORLG00000000059	pcbp3	99	90.390	Oryzias_latipes
ENSMALG00000000691	pcbp3	99	87.429	ENSORLG00000022739	-	99	87.429	Oryzias_latipes
ENSMALG00000000691	pcbp3	95	90.390	ENSORLG00020012671	pcbp3	97	90.390	Oryzias_latipes_hni
ENSMALG00000000691	pcbp3	99	87.143	ENSORLG00020006124	-	99	87.143	Oryzias_latipes_hni
ENSMALG00000000691	pcbp3	99	87.429	ENSORLG00015008051	-	99	87.429	Oryzias_latipes_hsok
ENSMALG00000000691	pcbp3	95	90.390	ENSORLG00015000429	pcbp3	97	90.390	Oryzias_latipes_hsok
ENSMALG00000000691	pcbp3	95	89.538	ENSOMEG00000020162	-	96	89.538	Oryzias_melastigma
ENSMALG00000000691	pcbp3	88	91.694	ENSOMEG00000020811	pcbp3	96	91.694	Oryzias_melastigma
ENSMALG00000000691	pcbp3	93	80.398	ENSOGAG00000008044	-	95	80.398	Otolemur_garnettii
ENSMALG00000000691	pcbp3	93	85.484	ENSPKIG00000020913	-	91	82.673	Paramormyrops_kingsleyae
ENSMALG00000000691	pcbp3	100	87.464	ENSPKIG00000019329	pcbp3	100	87.464	Paramormyrops_kingsleyae
ENSMALG00000000691	pcbp3	76	81.226	ENSPSIG00000008350	-	72	81.226	Pelodiscus_sinensis
ENSMALG00000000691	pcbp3	98	70.948	ENSPSIG00000014970	-	95	75.439	Pelodiscus_sinensis
ENSMALG00000000691	pcbp3	100	96.857	ENSPMGG00000022383	pcbp3	100	96.857	Periophthalmus_magnuspinnatus
ENSMALG00000000691	pcbp3	93	86.486	ENSPMAG00000004637	-	98	85.714	Petromyzon_marinus
ENSMALG00000000691	pcbp3	97	66.129	ENSPMAG00000004551	pcbp3	88	67.372	Petromyzon_marinus
ENSMALG00000000691	pcbp3	93	93.558	ENSPCIG00000028092	-	95	93.558	Phascolarctos_cinereus
ENSMALG00000000691	pcbp3	100	85.459	ENSPLAG00000011449	pcbp3	100	85.459	Poecilia_latipinna
ENSMALG00000000691	pcbp3	94	86.787	ENSPLAG00000004074	-	89	86.787	Poecilia_latipinna
ENSMALG00000000691	pcbp3	100	96.884	ENSPMEG00000021239	pcbp3	100	96.884	Poecilia_mexicana
ENSMALG00000000691	pcbp3	100	90.087	ENSPMEG00000006653	-	100	90.087	Poecilia_mexicana
ENSMALG00000000691	pcbp3	93	94.737	ENSPREG00000020585	-	96	89.846	Poecilia_reticulata
ENSMALG00000000691	pcbp3	95	90.520	ENSPREG00000015736	pcbp3	99	90.520	Poecilia_reticulata
ENSMALG00000000691	pcbp3	98	87.662	ENSPNYG00000012326	pcbp3	96	89.021	Pundamilia_nyererei
ENSMALG00000000691	pcbp3	95	89.846	ENSPNYG00000013205	-	96	89.846	Pundamilia_nyererei
ENSMALG00000000691	pcbp3	100	91.761	ENSPNAG00000008541	-	100	91.761	Pygocentrus_nattereri
ENSMALG00000000691	pcbp3	95	88.288	ENSPNAG00000015104	pcbp3	96	88.288	Pygocentrus_nattereri
ENSMALG00000000691	pcbp3	98	83.871	ENSRNOG00000001245	Pcbp3	95	86.810	Rattus_norvegicus
ENSMALG00000000691	pcbp3	98	74.534	ENSRBIG00000028177	-	95	79.272	Rhinopithecus_bieti
ENSMALG00000000691	pcbp3	98	79.027	ENSSHAG00000007890	-	95	81.739	Sarcophilus_harrisii
ENSMALG00000000691	pcbp3	100	92.308	ENSSFOG00015014706	pcbp3	100	92.308	Scleropages_formosus
ENSMALG00000000691	pcbp3	96	78.738	ENSSFOG00015007118	-	93	78.738	Scleropages_formosus
ENSMALG00000000691	pcbp3	95	94.294	ENSSFOG00015010205	pcbp3	99	94.294	Scleropages_formosus
ENSMALG00000000691	pcbp3	100	87.749	ENSSMAG00000003135	-	100	87.749	Scophthalmus_maximus
ENSMALG00000000691	pcbp3	97	90.691	ENSSMAG00000011929	pcbp3	99	90.691	Scophthalmus_maximus
ENSMALG00000000691	pcbp3	100	89.368	ENSSDUG00000008502	-	100	89.368	Seriola_dumerili
ENSMALG00000000691	pcbp3	96	98.792	ENSSDUG00000011608	pcbp3	99	98.792	Seriola_dumerili
ENSMALG00000000691	pcbp3	96	98.792	ENSSLDG00000008518	pcbp3	99	98.792	Seriola_lalandi_dorsalis
ENSMALG00000000691	pcbp3	100	88.604	ENSSLDG00000020161	-	100	88.604	Seriola_lalandi_dorsalis
ENSMALG00000000691	pcbp3	95	86.170	ENSSPUG00000013214	-	91	85.121	Sphenodon_punctatus
ENSMALG00000000691	pcbp3	100	86.782	ENSSPAG00000023341	-	100	86.782	Stegastes_partitus
ENSMALG00000000691	pcbp3	86	85.855	ENSSPAG00000004190	-	96	85.855	Stegastes_partitus
ENSMALG00000000691	pcbp3	93	80.000	ENSTGUG00000003316	-	95	80.000	Taeniopygia_guttata
ENSMALG00000000691	pcbp3	99	78.275	ENSTGUG00000008158	-	98	78.275	Taeniopygia_guttata
ENSMALG00000000691	pcbp3	100	92.857	ENSTRUG00000013604	pcbp3	100	92.857	Takifugu_rubripes
ENSMALG00000000691	pcbp3	94	84.520	ENSTRUG00000006280	-	95	84.520	Takifugu_rubripes
ENSMALG00000000691	pcbp3	93	86.377	ENSTTRG00000015075	-	95	86.377	Tursiops_truncatus
ENSMALG00000000691	pcbp3	98	77.879	ENSXETG00000011483	pcbp1	95	81.159	Xenopus_tropicalis
ENSMALG00000000691	pcbp3	93	76.316	ENSXETG00000010491	pcbp2	75	76.316	Xenopus_tropicalis
ENSMALG00000000691	pcbp3	100	96.884	ENSXCOG00000020481	pcbp3	100	96.884	Xiphophorus_couchianus
ENSMALG00000000691	pcbp3	100	88.319	ENSXMAG00000028711	-	100	88.319	Xiphophorus_maculatus
ENSMALG00000000691	pcbp3	100	97.159	ENSXMAG00000008175	pcbp3	100	97.159	Xiphophorus_maculatus