EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000000979 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-212k18.5
Alias: fb25b09|wu:fb25b09
Full Name: si:ch211-212k18.5
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 9277 bases
Position: chrKV884800.1:22638-31914
Accession: ZDB-GENE-030131-379
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000001311	zf-C2H2	PF00096.26	5e-19	1	2
ENSMALP00000001311	zf-C2H2	PF00096.26	5e-19	2	2
ENSMALP00000001280	zf-C2H2	PF00096.26	5.7e-16	1	1
ENSMALP00000001280	zf-met	PF12874.7	4.7e-10	1	2
ENSMALP00000001280	zf-met	PF12874.7	4.7e-10	2	2
ENSMALP00000001311	zf-met	PF12874.7	1.9e-09	1	2
ENSMALP00000001311	zf-met	PF12874.7	1.9e-09	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000001356	-	3234	-	ENSMALP00000001311	1077 (aa)	-	-
ENSMALT00000001324	-	5166	-	ENSMALP00000001280	1164 (aa)	-	-

Gene Model

Click here to download ENSMALG00000000979's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000000979's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000000979	si:ch211-212k18.5	65	78.448	ENSAPOG00000015347	sall2	54	83.962	Acanthochromis_polyacanthus
ENSMALG00000000979	si:ch211-212k18.5	97	79.319	ENSAPOG00000013387	si:ch211-212k18.5	99	77.642	Acanthochromis_polyacanthus
ENSMALG00000000979	si:ch211-212k18.5	81	81.524	ENSACIG00000019922	si:ch211-212k18.5	97	82.359	Amphilophus_citrinellus
ENSMALG00000000979	si:ch211-212k18.5	97	76.332	ENSAOCG00000010737	si:ch211-212k18.5	91	77.031	Amphiprion_ocellaris
ENSMALG00000000979	si:ch211-212k18.5	64	45.577	ENSAOCG00000016559	sall2	53	90.217	Amphiprion_ocellaris
ENSMALG00000000979	si:ch211-212k18.5	97	76.332	ENSAPEG00000006751	si:ch211-212k18.5	91	77.031	Amphiprion_percula
ENSMALG00000000979	si:ch211-212k18.5	56	45.881	ENSAPEG00000020215	sall2	71	90.217	Amphiprion_percula
ENSMALG00000000979	si:ch211-212k18.5	65	43.674	ENSATEG00000007303	sall2	65	54.902	Anabas_testudineus
ENSMALG00000000979	si:ch211-212k18.5	72	83.529	ENSATEG00000001254	si:ch211-212k18.5	92	84.353	Anabas_testudineus
ENSMALG00000000979	si:ch211-212k18.5	64	40.078	ENSACLG00000019867	sall2	60	45.780	Astatotilapia_calliptera
ENSMALG00000000979	si:ch211-212k18.5	97	75.411	ENSACLG00000009709	si:ch211-212k18.5	92	77.071	Astatotilapia_calliptera
ENSMALG00000000979	si:ch211-212k18.5	61	46.889	ENSAMXG00000020956	sall2	54	86.957	Astyanax_mexicanus
ENSMALG00000000979	si:ch211-212k18.5	98	54.286	ENSAMXG00000010979	si:ch211-212k18.5	97	53.866	Astyanax_mexicanus
ENSMALG00000000979	si:ch211-212k18.5	97	72.966	ENSCSEG00000004426	si:ch211-212k18.5	94	72.616	Cynoglossus_semilaevis
ENSMALG00000000979	si:ch211-212k18.5	61	62.821	ENSCSEG00000021148	sall2	50	62.821	Cynoglossus_semilaevis
ENSMALG00000000979	si:ch211-212k18.5	97	72.886	ENSCVAG00000007475	si:ch211-212k18.5	92	74.019	Cyprinodon_variegatus
ENSMALG00000000979	si:ch211-212k18.5	97	55.478	ENSDARG00000103316	si:ch211-212k18.5	92	54.066	Danio_rerio
ENSMALG00000000979	si:ch211-212k18.5	79	52.727	ENSDARG00000075116	sall2	70	52.830	Danio_rerio
ENSMALG00000000979	si:ch211-212k18.5	98	58.326	ENSELUG00000024534	si:ch211-212k18.5	96	58.291	Esox_lucius
ENSMALG00000000979	si:ch211-212k18.5	59	80.769	ENSFHEG00000017550	sall2	54	79.245	Fundulus_heteroclitus
ENSMALG00000000979	si:ch211-212k18.5	97	73.345	ENSFHEG00000017264	si:ch211-212k18.5	91	77.511	Fundulus_heteroclitus
ENSMALG00000000979	si:ch211-212k18.5	56	58.537	ENSGAFG00000015194	sall2	50	88.043	Gambusia_affinis
ENSMALG00000000979	si:ch211-212k18.5	97	73.258	ENSGAFG00000003746	si:ch211-212k18.5	92	72.997	Gambusia_affinis
ENSMALG00000000979	si:ch211-212k18.5	98	75.301	ENSHBUG00000019672	si:ch211-212k18.5	98	76.776	Haplochromis_burtoni
ENSMALG00000000979	si:ch211-212k18.5	82	38.042	ENSHBUG00000002882	sall2	52	82.075	Haplochromis_burtoni
ENSMALG00000000979	si:ch211-212k18.5	97	62.051	ENSHCOG00000002842	si:ch211-212k18.5	93	60.683	Hippocampus_comes
ENSMALG00000000979	si:ch211-212k18.5	89	62.810	ENSIPUG00000002559	sall2	92	51.607	Ictalurus_punctatus
ENSMALG00000000979	si:ch211-212k18.5	63	89.130	ENSKMAG00000020172	sall2	53	89.130	Kryptolebias_marmoratus
ENSMALG00000000979	si:ch211-212k18.5	97	72.444	ENSKMAG00000019657	si:ch211-212k18.5	92	73.224	Kryptolebias_marmoratus
ENSMALG00000000979	si:ch211-212k18.5	97	76.337	ENSLBEG00000020887	si:ch211-212k18.5	92	76.161	Labrus_bergylta
ENSMALG00000000979	si:ch211-212k18.5	58	59.091	ENSMAMG00000016229	sall2	62	70.588	Mastacembelus_armatus
ENSMALG00000000979	si:ch211-212k18.5	71	90.156	ENSMAMG00000015887	si:ch211-212k18.5	97	90.156	Mastacembelus_armatus
ENSMALG00000000979	si:ch211-212k18.5	82	38.143	ENSMZEG00005012103	sall2	52	82.075	Maylandia_zebra
ENSMALG00000000979	si:ch211-212k18.5	97	75.411	ENSMZEG00005021214	si:ch211-212k18.5	92	77.071	Maylandia_zebra
ENSMALG00000000979	si:ch211-212k18.5	87	83.662	ENSMMOG00000012726	si:ch211-212k18.5	91	83.198	Mola_mola
ENSMALG00000000979	si:ch211-212k18.5	98	71.293	ENSNBRG00000023948	si:ch211-212k18.5	94	71.875	Neolamprologus_brichardi
ENSMALG00000000979	si:ch211-212k18.5	94	42.091	ENSNBRG00000017645	sall2	76	46.931	Neolamprologus_brichardi
ENSMALG00000000979	si:ch211-212k18.5	97	68.975	ENSORLG00000030429	si:ch211-212k18.5	92	68.887	Oryzias_latipes
ENSMALG00000000979	si:ch211-212k18.5	97	68.799	ENSORLG00020008145	si:ch211-212k18.5	92	69.062	Oryzias_latipes_hni
ENSMALG00000000979	si:ch211-212k18.5	96	68.811	ENSORLG00015004982	si:ch211-212k18.5	92	68.975	Oryzias_latipes_hsok
ENSMALG00000000979	si:ch211-212k18.5	97	68.122	ENSOMEG00000013949	si:ch211-212k18.5	92	69.083	Oryzias_melastigma
ENSMALG00000000979	si:ch211-212k18.5	60	82.857	ENSOMEG00000012904	sall2	65	41.400	Oryzias_melastigma
ENSMALG00000000979	si:ch211-212k18.5	97	65.991	ENSPMGG00000018714	si:ch211-212k18.5	97	66.520	Periophthalmus_magnuspinnatus
ENSMALG00000000979	si:ch211-212k18.5	55	47.003	ENSPFOG00000016504	sall2	60	46.143	Poecilia_formosa
ENSMALG00000000979	si:ch211-212k18.5	97	73.716	ENSPFOG00000023705	si:ch211-212k18.5	98	74.151	Poecilia_formosa
ENSMALG00000000979	si:ch211-212k18.5	55	46.316	ENSPLAG00000018320	sall2	58	44.664	Poecilia_latipinna
ENSMALG00000000979	si:ch211-212k18.5	97	73.542	ENSPLAG00000002577	si:ch211-212k18.5	92	73.890	Poecilia_latipinna
ENSMALG00000000979	si:ch211-212k18.5	97	73.542	ENSPMEG00000016395	si:ch211-212k18.5	98	73.977	Poecilia_mexicana
ENSMALG00000000979	si:ch211-212k18.5	55	46.134	ENSPMEG00000006335	sall2	58	44.664	Poecilia_mexicana
ENSMALG00000000979	si:ch211-212k18.5	62	40.267	ENSPREG00000021908	sall2	50	88.043	Poecilia_reticulata
ENSMALG00000000979	si:ch211-212k18.5	97	73.473	ENSPREG00000005292	si:ch211-212k18.5	92	73.629	Poecilia_reticulata
ENSMALG00000000979	si:ch211-212k18.5	98	72.155	ENSPNYG00000021576	si:ch211-212k18.5	92	73.264	Pundamilia_nyererei
ENSMALG00000000979	si:ch211-212k18.5	99	54.877	ENSPNAG00000006123	si:ch211-212k18.5	99	52.389	Pygocentrus_nattereri
ENSMALG00000000979	si:ch211-212k18.5	97	78.709	ENSSMAG00000006241	si:ch211-212k18.5	92	77.535	Scophthalmus_maximus
ENSMALG00000000979	si:ch211-212k18.5	82	66.667	ENSSMAG00000014157	sall2	65	89.130	Scophthalmus_maximus
ENSMALG00000000979	si:ch211-212k18.5	97	81.984	ENSSDUG00000006164	si:ch211-212k18.5	92	81.288	Seriola_dumerili
ENSMALG00000000979	si:ch211-212k18.5	97	83.812	ENSSLDG00000003393	si:ch211-212k18.5	92	83.899	Seriola_lalandi_dorsalis
ENSMALG00000000979	si:ch211-212k18.5	61	76.724	ENSSPAG00000023009	sall2	53	90.217	Stegastes_partitus
ENSMALG00000000979	si:ch211-212k18.5	98	77.923	ENSSPAG00000013435	si:ch211-212k18.5	95	78.204	Stegastes_partitus
ENSMALG00000000979	si:ch211-212k18.5	91	78.143	ENSTRUG00000025082	si:ch211-212k18.5	93	77.203	Takifugu_rubripes
ENSMALG00000000979	si:ch211-212k18.5	97	70.993	ENSXCOG00000000762	si:ch211-212k18.5	92	70.732	Xiphophorus_couchianus
ENSMALG00000000979	si:ch211-212k18.5	56	64.865	ENSXMAG00000000902	sall2	58	45.053	Xiphophorus_maculatus
ENSMALG00000000979	si:ch211-212k18.5	97	73.258	ENSXMAG00000001461	si:ch211-212k18.5	92	72.997	Xiphophorus_maculatus