EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000001062 (Gene tree)
Gene ID: -
Gene Symbol: zgc:114118
Alias: -
Full Name: zgc:114118
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 3921 bases
Position: chrKV884793.1:1182961-1186881
Accession: ZDB-GENE-050913-57
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000001467	MMR_HSR1	PF01926.23	6e-05	1	1
ENSMALP00000001509	MMR_HSR1	PF01926.23	6.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000001568	-	765	-	ENSMALP00000001519	254 (aa)	-	-
ENSMALT00000001554	-	759	-	ENSMALP00000001505	252 (aa)	-	-
ENSMALT00000001558	-	780	-	ENSMALP00000001509	259 (aa)	-	-
ENSMALT00000001516	-	759	-	ENSMALP00000001467	252 (aa)	-	-

Gene Model

Click here to download ENSMALG00000001062's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000001062's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000001062	zgc:114118	64	31.098	ENSMALG00000010438	rab30	77	31.098
ENSMALG00000001062	zgc:114118	65	33.939	ENSMALG00000019758	rras2	80	35.461
ENSMALG00000001062	zgc:114118	62	30.000	ENSMALG00000012506	rab9a	72	30.921
ENSMALG00000001062	zgc:114118	69	37.288	ENSMALG00000019233	rasd4	82	37.714
ENSMALG00000001062	zgc:114118	59	31.169	ENSMALG00000002696	rras	82	31.214
ENSMALG00000001062	zgc:114118	63	30.061	ENSMALG00000012723	RAB39B	74	30.675
ENSMALG00000001062	zgc:114118	60	31.410	ENSMALG00000013514	rab38b	69	30.769
ENSMALG00000001062	zgc:114118	60	32.237	ENSMALG00000010781	kras	84	33.537
ENSMALG00000001062	zgc:114118	71	31.414	ENSMALG00000006674	nkiras2	96	31.414
ENSMALG00000001062	zgc:114118	64	30.178	ENSMALG00000012630	rab33a	73	30.178
ENSMALG00000001062	zgc:114118	69	36.158	ENSMALG00000022582	-	82	36.571
ENSMALG00000001062	zgc:114118	60	34.211	ENSMALG00000011273	hrasb	83	35.366
ENSMALG00000001062	zgc:114118	55	33.813	ENSMALG00000012930	si:ch73-116o1.2	71	34.211

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000001062	zgc:114118	91	49.356	ENSLACG00000014614	si:dkey-27j5.5	91	48.000	Latimeria_chalumnae
ENSMALG00000001062	zgc:114118	99	77.075	ENSMMOG00000011207	zgc:114118	99	78.543	Mola_mola