EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMALG00000001208 (Gene tree)
Gene ID
109970508
Gene Symbol
RPA1 (1 of many)
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A 70 kDa DNA-binding subunit-like
Gene Type
protein_coding
Species
Monopterus_albus
Status
putative
Strand
Minus strand
Length
38875 bases
Position
chrKV884887.1:682774-721648
Accession
109970508
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMALP00000001631tRNA_anti-codonPF01336.251.5e-1011
ENSMALP00000001618tRNA_anti-codonPF01336.251.5e-1011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMALT00000001682RPA1 (1 of many)-2026183XM_020618085ENSMALP00000001631708 (aa)XP_020473741UPI0009B4400A
ENSMALT00000001669RPA1 (1 of many)-2016103XM_020618081ENSMALP00000001618718 (aa)XP_020473737UPI0009B30D50
Gene Model
Click here to download ENSMALG00000001208's gene model file
Pathways
Pathway IDPathway NameSource
malb03030DNA replicationKEGG
malb03420Nucleotide excision repairKEGG
malb03430Mismatch repairKEGG
malb03440Homologous recombinationKEGG
malb03460Fanconi anemia pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000001208's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMALG00000001208RPA17768.409ENSMALG00000011453rpa19268.409
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMALG00000001208RPA110074.687ENSAPOG00000019409RPA110074.548Acanthochromis_polyacanthus
ENSMALG00000001208RPA17968.958ENSAPOG00000011658rpa19968.958Acanthochromis_polyacanthus
ENSMALG00000001208RPA18360.385ENSAMEG00000007706RPA19560.385Ailuropoda_melanoleuca
ENSMALG00000001208RPA18461.364ENSACIG00000007277rpa19961.364Amphilophus_citrinellus
ENSMALG00000001208RPA19769.811ENSACIG00000012881RPA19970.827Amphilophus_citrinellus
ENSMALG00000001208RPA19783.750ENSAOCG00000009003RPA110072.601Amphiprion_ocellaris
ENSMALG00000001208RPA18670.872ENSAOCG00000023376rpa19970.872Amphiprion_ocellaris
ENSMALG00000001208RPA110073.435ENSAPEG00000019132RPA110073.992Amphiprion_percula
ENSMALG00000001208RPA18869.778ENSAPEG00000008634rpa19969.778Amphiprion_percula
ENSMALG00000001208RPA110072.323ENSATEG00000006443RPA110072.879Anabas_testudineus
ENSMALG00000001208RPA17469.615ENSATEG00000022024rpa19369.615Anabas_testudineus
ENSMALG00000001208RPA18453.155ENSAPLG00000012442RPA19952.964Anas_platyrhynchos
ENSMALG00000001208RPA18358.186ENSACAG00000014490RPA19958.407Anolis_carolinensis
ENSMALG00000001208RPA18658.367ENSANAG00000023456RPA19859.660Aotus_nancymaae
ENSMALG00000001208RPA19978.517ENSACLG00000005223RPA19978.517Astatotilapia_calliptera
ENSMALG00000001208RPA17572.540ENSACLG00000006640rpa19672.540Astatotilapia_calliptera
ENSMALG00000001208RPA18868.468ENSAMXG00000008418rpa19968.468Astyanax_mexicanus
ENSMALG00000001208RPA18259.956ENSBTAG00000009711RPA19659.956Bos_taurus
ENSMALG00000001208RPA16031.808WBGene00017546rpa-16531.808Caenorhabditis_elegans
ENSMALG00000001208RPA17861.991ENSCJAG00000001848RPA19461.991Callithrix_jacchus
ENSMALG00000001208RPA18459.657ENSCAFG00000019249RPA19859.871Canis_familiaris
ENSMALG00000001208RPA18459.657ENSCAFG00020009847RPA19859.871Canis_lupus_dingo
ENSMALG00000001208RPA17959.735ENSCHIG00000026308RPA19559.911Capra_hircus
ENSMALG00000001208RPA18262.358ENSTSYG00000003482-9462.358Carlito_syrichta
ENSMALG00000001208RPA17762.187ENSCPOG00000000035RPA19162.187Cavia_porcellus
ENSMALG00000001208RPA17655.670ENSCCAG00000010981RPA19450.679Cebus_capucinus
ENSMALG00000001208RPA17762.415ENSCLAG00000005185-9162.415Chinchilla_lanigera
ENSMALG00000001208RPA18757.306ENSCLAG00000015045-9957.306Chinchilla_lanigera
ENSMALG00000001208RPA17655.670ENSCSAG00000013833RPA19648.416Chlorocebus_sabaeus
ENSMALG00000001208RPA17863.781ENSCHOG00000013540-9363.781Choloepus_hoffmanni
ENSMALG00000001208RPA16163.303ENSCHOG00000009454-9963.303Choloepus_hoffmanni
ENSMALG00000001208RPA17763.532ENSCPBG00000020377RPA19063.532Chrysemys_picta_bellii
ENSMALG00000001208RPA18246.537ENSCING00000023482-9746.537Ciona_intestinalis
ENSMALG00000001208RPA18161.765ENSCANG00000030911RPA19861.765Colobus_angolensis_palliatus
ENSMALG00000001208RPA18061.239ENSCGRG00001008197Rpa19461.239Cricetulus_griseus_chok1gshd
ENSMALG00000001208RPA16161.239ENSCGRG00000000582Rpa18561.239Cricetulus_griseus_crigri
ENSMALG00000001208RPA18668.493ENSCSEG00000013066rpa19968.493Cynoglossus_semilaevis
ENSMALG00000001208RPA19972.784ENSCSEG00000012726RPA19960.534Cynoglossus_semilaevis
ENSMALG00000001208RPA19769.020ENSCVAG00000013446-9669.597Cyprinodon_variegatus
ENSMALG00000001208RPA17769.108ENSCVAG00000019431rpa19969.108Cyprinodon_variegatus
ENSMALG00000001208RPA18868.694ENSDARG00000003938rpa19968.694Danio_rerio
ENSMALG00000001208RPA18063.326ENSDNOG00000017218RPA19363.326Dasypus_novemcinctus
ENSMALG00000001208RPA18162.785ENSDORG00000006199Rpa19958.921Dipodomys_ordii
ENSMALG00000001208RPA18043.387FBgn0010173RpA-709644.084Drosophila_melanogaster
ENSMALG00000001208RPA16961.856ENSETEG00000017608RPA18161.856Echinops_telfairi
ENSMALG00000001208RPA18360.802ENSEASG00005009372RPA19760.754Equus_asinus_asinus
ENSMALG00000001208RPA18161.818ENSECAG00000023886RPA19859.442Equus_caballus
ENSMALG00000001208RPA15961.575ENSEEUG00000002186-6861.575Erinaceus_europaeus
ENSMALG00000001208RPA18866.814ENSELUG00000021071rpa19966.814Esox_lucius
ENSMALG00000001208RPA15970.983ENSELUG00000006136RPA19570.983Esox_lucius
ENSMALG00000001208RPA18162.896ENSFCAG00000006306RPA19462.896Felis_catus
ENSMALG00000001208RPA18360.976ENSFALG00000006575RPA19560.976Ficedula_albicollis
ENSMALG00000001208RPA18163.242ENSFDAG00000007720RPA19563.242Fukomys_damarensis
ENSMALG00000001208RPA17967.834ENSFHEG00000003580rpa19467.834Fundulus_heteroclitus
ENSMALG00000001208RPA18264.842ENSGMOG00000010382rpa19964.842Gadus_morhua
ENSMALG00000001208RPA18161.039ENSGALG00000003072RPA19661.039Gallus_gallus
ENSMALG00000001208RPA18668.879ENSGAFG00000012916rpa19968.879Gambusia_affinis
ENSMALG00000001208RPA19968.555ENSGAFG00000020953RPA19968.759Gambusia_affinis
ENSMALG00000001208RPA18768.934ENSGACG00000010856rpa19968.934Gasterosteus_aculeatus
ENSMALG00000001208RPA18263.532ENSGAGG00000013611RPA19763.532Gopherus_agassizii
ENSMALG00000001208RPA17862.329ENSGGOG00000014186RPA19662.329Gorilla_gorilla
ENSMALG00000001208RPA19773.303ENSHBUG00000009348RPA19873.303Haplochromis_burtoni
ENSMALG00000001208RPA18672.311ENSHBUG00000017773rpa19972.311Haplochromis_burtoni
ENSMALG00000001208RPA17763.470ENSHGLG00000008846RPA19663.470Heterocephalus_glaber_female
ENSMALG00000001208RPA18158.676ENSHGLG00100000799-9558.676Heterocephalus_glaber_male
ENSMALG00000001208RPA17754.005ENSHGLG00100002005-9554.005Heterocephalus_glaber_male
ENSMALG00000001208RPA17763.470ENSHGLG00100017755-9663.470Heterocephalus_glaber_male
ENSMALG00000001208RPA18261.915ENSHCOG00000001401rpa19962.870Hippocampus_comes
ENSMALG00000001208RPA18451.797ENSHCOG00000000351RPA19951.797Hippocampus_comes
ENSMALG00000001208RPA18868.243ENSIPUG00000004400rpa19968.243Ictalurus_punctatus
ENSMALG00000001208RPA17460.780ENSSTOG00000022475RPA18960.780Ictidomys_tridecemlineatus
ENSMALG00000001208RPA17461.048ENSJJAG00000000876Rpa18861.048Jaculus_jaculus
ENSMALG00000001208RPA19676.228ENSKMAG00000000234RPA19976.228Kryptolebias_marmoratus
ENSMALG00000001208RPA18769.042ENSKMAG00000005605rpa19969.042Kryptolebias_marmoratus
ENSMALG00000001208RPA18165.900ENSLBEG00000021604rpa19669.005Labrus_bergylta
ENSMALG00000001208RPA19973.513ENSLBEG00000002281RPA19973.222Labrus_bergylta
ENSMALG00000001208RPA16358.537ENSLACG00000007210RPA19158.537Latimeria_chalumnae
ENSMALG00000001208RPA18862.146ENSLOCG00000006397rpa19962.551Lepisosteus_oculatus
ENSMALG00000001208RPA18955.253ENSLAFG00000015354RPA19660.310Loxodonta_africana
ENSMALG00000001208RPA16261.919ENSMFAG00000036138-9361.919Macaca_fascicularis
ENSMALG00000001208RPA17761.538ENSMMUG00000011604-9661.538Macaca_mulatta
ENSMALG00000001208RPA18257.919ENSMMUG00000002442-9657.919Macaca_mulatta
ENSMALG00000001208RPA17258.559ENSMNEG00000029837-9558.559Macaca_nemestrina
ENSMALG00000001208RPA17460.860ENSMNEG00000031632-9360.860Macaca_nemestrina
ENSMALG00000001208RPA17659.050ENSMLEG00000038768-9559.050Mandrillus_leucophaeus
ENSMALG00000001208RPA18670.776ENSMAMG00000017993rpa19970.776Mastacembelus_armatus
ENSMALG00000001208RPA19976.011ENSMAMG00000020097RPA19975.453Mastacembelus_armatus
ENSMALG00000001208RPA18672.311ENSMZEG00005007551rpa19972.311Maylandia_zebra
ENSMALG00000001208RPA19978.517ENSMZEG00005024731RPA19978.517Maylandia_zebra
ENSMALG00000001208RPA18160.173ENSMGAG00000005315RPA19460.173Meleagris_gallopavo
ENSMALG00000001208RPA17561.697ENSMAUG00000010474Rpa19361.697Mesocricetus_auratus
ENSMALG00000001208RPA18363.721ENSMICG00000012867RPA19959.667Microcebus_murinus
ENSMALG00000001208RPA18161.009ENSMOCG00000013019Rpa19461.009Microtus_ochrogaster
ENSMALG00000001208RPA18769.615ENSMMOG00000014292rpa19969.615Mola_mola
ENSMALG00000001208RPA19477.016ENSMMOG00000010868RPA19880.046Mola_mola
ENSMALG00000001208RPA18163.158ENSMODG00000010549RPA19363.158Monodelphis_domestica
ENSMALG00000001208RPA18061.468MGP_CAROLIEiJ_G0016734Rpa19461.468Mus_caroli
ENSMALG00000001208RPA18061.468ENSMUSG00000000751Rpa19461.468Mus_musculus
ENSMALG00000001208RPA18061.697MGP_PahariEiJ_G0017871Rpa19461.697Mus_pahari
ENSMALG00000001208RPA18061.697MGP_SPRETEiJ_G0017577Rpa19461.697Mus_spretus
ENSMALG00000001208RPA18460.086ENSMPUG00000013119RPA19860.086Mustela_putorius_furo
ENSMALG00000001208RPA18262.132ENSMLUG00000006113RPA19562.132Myotis_lucifugus
ENSMALG00000001208RPA18060.088ENSNGAG00000004522Rpa19060.088Nannospalax_galili
ENSMALG00000001208RPA19478.252ENSNBRG00000009672RPA19778.252Neolamprologus_brichardi
ENSMALG00000001208RPA17672.540ENSNBRG00000020595rpa19672.540Neolamprologus_brichardi
ENSMALG00000001208RPA17762.100ENSNLEG00000017149RPA19462.100Nomascus_leucogenys
ENSMALG00000001208RPA17952.860ENSMEUG00000006714RPA19152.860Notamacropus_eugenii
ENSMALG00000001208RPA17861.959ENSODEG00000009038RPA19061.959Octodon_degus
ENSMALG00000001208RPA18671.854ENSONIG00000013135rpa19971.854Oreochromis_niloticus
ENSMALG00000001208RPA18062.557ENSOANG00000010880RPA19462.785Ornithorhynchus_anatinus
ENSMALG00000001208RPA18262.471ENSOCUG00000001504RPA19562.471Oryctolagus_cuniculus
ENSMALG00000001208RPA19966.252ENSORLG00000003368RPA19966.252Oryzias_latipes
ENSMALG00000001208RPA18869.507ENSORLG00000004856rpa19969.507Oryzias_latipes
ENSMALG00000001208RPA19968.377ENSORLG00020015284RPA19968.377Oryzias_latipes_hni
ENSMALG00000001208RPA18869.731ENSORLG00020008980rpa19969.731Oryzias_latipes_hni
ENSMALG00000001208RPA19879.089ENSORLG00015020383RPA19966.481Oryzias_latipes_hsok
ENSMALG00000001208RPA16179.032ENSORLG00015005867-9979.032Oryzias_latipes_hsok
ENSMALG00000001208RPA18869.731ENSORLG00015013982rpa19969.731Oryzias_latipes_hsok
ENSMALG00000001208RPA18667.431ENSOMEG00000004704rpa19967.431Oryzias_melastigma
ENSMALG00000001208RPA19374.565ENSOMEG00000011040RPA19976.129Oryzias_melastigma
ENSMALG00000001208RPA18956.530ENSOGAG00000005581-9461.261Otolemur_garnettii
ENSMALG00000001208RPA16063.478ENSOGAG00000029379-9163.478Otolemur_garnettii
ENSMALG00000001208RPA17959.735ENSOARG00000014479RPA19559.911Ovis_aries
ENSMALG00000001208RPA17762.557ENSPPAG00000039680RPA19462.557Pan_paniscus
ENSMALG00000001208RPA18163.122ENSPPRG00000011807RPA19463.122Panthera_pardus
ENSMALG00000001208RPA18163.122ENSPTIG00000007898RPA19463.122Panthera_tigris_altaica
ENSMALG00000001208RPA17762.329ENSPTRG00000008539RPA19462.329Pan_troglodytes
ENSMALG00000001208RPA17861.538ENSPANG00000024592RPA19661.538Papio_anubis
ENSMALG00000001208RPA17371.253ENSPKIG00000008053rpa19465.639Paramormyrops_kingsleyae
ENSMALG00000001208RPA18162.844ENSPSIG00000015617RPA19562.844Pelodiscus_sinensis
ENSMALG00000001208RPA19076.087ENSPMGG00000000543RPA19976.087Periophthalmus_magnuspinnatus
ENSMALG00000001208RPA17869.820ENSPMGG00000011589rpa19569.820Periophthalmus_magnuspinnatus
ENSMALG00000001208RPA18061.239ENSPEMG00000021061Rpa19461.239Peromyscus_maniculatus_bairdii
ENSMALG00000001208RPA17763.387ENSPCIG00000019049RPA19563.387Phascolarctos_cinereus
ENSMALG00000001208RPA19562.725ENSPFOG00000003987rpa19962.725Poecilia_formosa
ENSMALG00000001208RPA19567.211ENSPLAG00000008844-9768.029Poecilia_latipinna
ENSMALG00000001208RPA19562.525ENSPLAG00000004984rpa19962.525Poecilia_latipinna
ENSMALG00000001208RPA19562.725ENSPMEG00000020602rpa19962.725Poecilia_mexicana
ENSMALG00000001208RPA19567.656ENSPMEG00000003627-9768.029Poecilia_mexicana
ENSMALG00000001208RPA19969.547ENSPREG00000010119RPA110068.950Poecilia_reticulata
ENSMALG00000001208RPA18157.143ENSPREG00000010174rpa19062.621Poecilia_reticulata
ENSMALG00000001208RPA18958.130ENSPCOG00000001799RPA19958.130Propithecus_coquereli
ENSMALG00000001208RPA18161.224ENSPVAG00000002149RPA19561.224Pteropus_vampyrus
ENSMALG00000001208RPA19978.517ENSPNYG00000024165RPA19978.517Pundamilia_nyererei
ENSMALG00000001208RPA18672.540ENSPNYG00000016316rpa19972.540Pundamilia_nyererei
ENSMALG00000001208RPA18158.650ENSPNAG00000008599rpa19660.899Pygocentrus_nattereri
ENSMALG00000001208RPA17563.598ENSRNOG00000003123Rpa19361.982Rattus_norvegicus
ENSMALG00000001208RPA18261.312ENSRBIG00000036587RPA19661.312Rhinopithecus_bieti
ENSMALG00000001208RPA18256.787ENSRROG00000043278RPA19656.787Rhinopithecus_roxellana
ENSMALG00000001208RPA16036.301YAR007CRFA17036.301Saccharomyces_cerevisiae
ENSMALG00000001208RPA17162.217ENSSBOG00000030233RPA19162.217Saimiri_boliviensis_boliviensis
ENSMALG00000001208RPA17664.073ENSSHAG00000007969RPA19860.248Sarcophilus_harrisii
ENSMALG00000001208RPA18570.655ENSSFOG00015005362rpa19270.655Scleropages_formosus
ENSMALG00000001208RPA110071.369ENSSMAG00000019746RPA110071.646Scophthalmus_maximus
ENSMALG00000001208RPA18769.820ENSSDUG00000011949rpa19969.820Seriola_dumerili
ENSMALG00000001208RPA110075.139ENSSDUG00000016358RPA110075.694Seriola_dumerili
ENSMALG00000001208RPA18769.369ENSSLDG00000011806rpa19969.369Seriola_lalandi_dorsalis
ENSMALG00000001208RPA110075.000ENSSLDG00000020784RPA110075.000Seriola_lalandi_dorsalis
ENSMALG00000001208RPA17063.636ENSSARG00000007506RPA18563.636Sorex_araneus
ENSMALG00000001208RPA18754.326ENSSPUG00000007223RPA19854.326Sphenodon_punctatus
ENSMALG00000001208RPA18465.244ENSSPAG00000009903rpa19965.244Stegastes_partitus
ENSMALG00000001208RPA19384.783ENSSPAG00000011165RPA110084.565Stegastes_partitus
ENSMALG00000001208RPA17960.802ENSSSCG00000017822RPA19760.802Sus_scrofa
ENSMALG00000001208RPA18461.161ENSTGUG00000005775RPA19961.161Taeniopygia_guttata
ENSMALG00000001208RPA18768.864ENSTRUG00000003616rpa19968.864Takifugu_rubripes
ENSMALG00000001208RPA19970.506ENSTRUG00000000405RPA19970.166Takifugu_rubripes
ENSMALG00000001208RPA18768.778ENSTNIG00000016199rpa19969.005Tetraodon_nigroviridis
ENSMALG00000001208RPA16262.642ENSTBEG00000002709RPA17362.642Tupaia_belangeri
ENSMALG00000001208RPA17761.224ENSTTRG00000001169RPA19461.224Tursiops_truncatus
ENSMALG00000001208RPA17476.923ENSUAMG00000015676RPA19576.923Ursus_americanus
ENSMALG00000001208RPA18557.873ENSUMAG00000009328RPA19860.086Ursus_maritimus
ENSMALG00000001208RPA18259.020ENSVPAG00000009443RPA19659.020Vicugna_pacos
ENSMALG00000001208RPA18459.871ENSVVUG00000021715RPA19960.086Vulpes_vulpes
ENSMALG00000001208RPA18364.220ENSXETG00000013538rpa19964.220Xenopus_tropicalis
ENSMALG00000001208RPA17268.812ENSXCOG00000010068rpa18768.812Xiphophorus_couchianus
ENSMALG00000001208RPA19279.918ENSXCOG00000009899-9979.918Xiphophorus_couchianus
ENSMALG00000001208RPA19971.813ENSXMAG00000010333RPA19971.548Xiphophorus_maculatus
ENSMALG00000001208RPA18668.192ENSXMAG00000004102rpa19968.192Xiphophorus_maculatus

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