EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000001422 (Gene tree)
Gene ID: 109973994
Gene Symbol: srrm4
Alias: ZnSR100|im:7136231|si:dkey-1k23.1
Full Name: serine/arginine repetitive matrix 4
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 59373 bases
Position: chrKV885005.1:251083-310455
Accession: 109973994
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000001891	SRRM_C	PF15230.6	1.4e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000001945	-	2646	XM_020623940	ENSMALP00000001891	566 (aa)	XP_020479596	UPI0009B37D52

Gene Model

Click here to download ENSMALG00000001422's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000001422's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000001422	srrm4	96	84.854	ENSAPOG00000010969	srrm4	89	84.740	Acanthochromis_polyacanthus
ENSMALG00000001422	srrm4	63	77.215	ENSACIG00000002171	srrm4	78	77.215	Amphilophus_citrinellus
ENSMALG00000001422	srrm4	96	83.242	ENSAOCG00000019891	srrm4	89	82.079	Amphiprion_ocellaris
ENSMALG00000001422	srrm4	96	83.424	ENSAPEG00000011132	srrm4	88	82.258	Amphiprion_percula
ENSMALG00000001422	srrm4	56	97.500	ENSATEG00000005330	srrm4	51	74.839	Anabas_testudineus
ENSMALG00000001422	srrm4	62	48.588	ENSDARG00000086327	srrm4	59	48.588	Danio_rerio
ENSMALG00000001422	srrm4	67	57.623	ENSELUG00000004986	srrm4	81	58.750	Esox_lucius
ENSMALG00000001422	srrm4	80	52.258	ENSGMOG00000006714	srrm4	90	50.638	Gadus_morhua
ENSMALG00000001422	srrm4	96	79.304	ENSHBUG00000010505	srrm4	89	78.815	Haplochromis_burtoni
ENSMALG00000001422	srrm4	96	68.488	ENSKMAG00000001873	srrm4	90	68.638	Kryptolebias_marmoratus
ENSMALG00000001422	srrm4	96	80.146	ENSLBEG00000008471	srrm4	89	80.108	Labrus_bergylta
ENSMALG00000001422	srrm4	60	48.997	ENSLOCG00000003219	srrm4	56	49.275	Lepisosteus_oculatus
ENSMALG00000001422	srrm4	96	80.328	ENSONIG00000010552	srrm4	89	80.179	Oreochromis_niloticus
ENSMALG00000001422	srrm4	96	61.905	ENSOMEG00000012376	srrm4	89	59.353	Oryzias_melastigma
ENSMALG00000001422	srrm4	67	63.446	ENSPFOG00000014600	srrm4	87	61.125	Poecilia_formosa
ENSMALG00000001422	srrm4	61	44.101	ENSPNAG00000010426	srrm4	89	43.238	Pygocentrus_nattereri
ENSMALG00000001422	srrm4	62	46.027	ENSSFOG00015019902	srrm4	60	44.974	Scleropages_formosus
ENSMALG00000001422	srrm4	65	72.222	ENSSDUG00000017519	srrm4	78	73.723	Seriola_dumerili
ENSMALG00000001422	srrm4	74	72.792	ENSSPAG00000016190	srrm4	85	71.918	Stegastes_partitus
ENSMALG00000001422	srrm4	96	69.314	ENSXMAG00000002658	srrm4	90	71.378	Xiphophorus_maculatus