EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000001562 (Gene tree)
Gene ID: 109959352
Gene Symbol: si:ch211-117n7.8
Alias: -
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 44103 bases
Position: chrKV884691.1:3918568-3962670
Accession: 109959352
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000002089	S1	PF00575.23	2.1e-12	1	1
ENSMALP00000002100	S1	PF00575.23	1.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000002158	-	3523	XM_020598633	ENSMALP00000002100	972 (aa)	XP_020454289	-
ENSMALT00000002147	-	4858	-	ENSMALP00000002089	1010 (aa)	-	UPI0009B36029

Gene Model

Click here to download ENSMALG00000001562's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000001562's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000001562	si:ch211-117n7.8	86	55.227	ENSG00000068784	SRBD1	99	50.290	Homo_sapiens
ENSMALG00000001562	si:ch211-117n7.8	100	80.488	ENSAPOG00000005103	si:ch211-117n7.8	100	79.902	Acanthochromis_polyacanthus
ENSMALG00000001562	si:ch211-117n7.8	97	51.497	ENSAMEG00000005993	SRBD1	99	50.291	Ailuropoda_melanoleuca
ENSMALG00000001562	si:ch211-117n7.8	97	80.986	ENSACIG00000009875	si:ch211-117n7.8	100	80.785	Amphilophus_citrinellus
ENSMALG00000001562	si:ch211-117n7.8	100	79.492	ENSAOCG00000024718	si:ch211-117n7.8	100	79.395	Amphiprion_ocellaris
ENSMALG00000001562	si:ch211-117n7.8	97	78.557	ENSAPEG00000002645	si:ch211-117n7.8	100	78.457	Amphiprion_percula
ENSMALG00000001562	si:ch211-117n7.8	100	81.809	ENSATEG00000010844	si:ch211-117n7.8	100	81.809	Anabas_testudineus
ENSMALG00000001562	si:ch211-117n7.8	96	53.467	ENSAPLG00000006313	SRBD1	100	51.798	Anas_platyrhynchos
ENSMALG00000001562	si:ch211-117n7.8	93	52.361	ENSANAG00000025573	SRBD1	99	50.484	Aotus_nancymaae
ENSMALG00000001562	si:ch211-117n7.8	100	81.641	ENSACLG00000024219	si:ch211-117n7.8	100	81.348	Astatotilapia_calliptera
ENSMALG00000001562	si:ch211-117n7.8	100	62.451	ENSAMXG00000004294	SRBD1	100	63.168	Astyanax_mexicanus
ENSMALG00000001562	si:ch211-117n7.8	93	52.875	ENSBTAG00000007508	SRBD1	99	50.000	Bos_taurus
ENSMALG00000001562	si:ch211-117n7.8	97	51.305	ENSCJAG00000000727	SRBD1	99	50.831	Callithrix_jacchus
ENSMALG00000001562	si:ch211-117n7.8	83	56.842	ENSCAFG00000002554	SRBD1	99	51.120	Canis_familiaris
ENSMALG00000001562	si:ch211-117n7.8	83	57.637	ENSCAFG00020026284	SRBD1	95	57.683	Canis_lupus_dingo
ENSMALG00000001562	si:ch211-117n7.8	93	52.977	ENSCHIG00000016535	SRBD1	98	51.556	Capra_hircus
ENSMALG00000001562	si:ch211-117n7.8	97	51.536	ENSTSYG00000012797	SRBD1	99	50.967	Carlito_syrichta
ENSMALG00000001562	si:ch211-117n7.8	99	51.819	ENSCPOG00000004773	SRBD1	99	51.721	Cavia_porcellus
ENSMALG00000001562	si:ch211-117n7.8	93	52.977	ENSCCAG00000025589	SRBD1	99	50.967	Cebus_capucinus
ENSMALG00000001562	si:ch211-117n7.8	93	52.464	ENSCATG00000039530	SRBD1	99	51.024	Cercocebus_atys
ENSMALG00000001562	si:ch211-117n7.8	99	51.721	ENSCLAG00000008623	SRBD1	99	51.429	Chinchilla_lanigera
ENSMALG00000001562	si:ch211-117n7.8	93	52.766	ENSCSAG00000013350	SRBD1	99	50.927	Chlorocebus_sabaeus
ENSMALG00000001562	si:ch211-117n7.8	84	76.744	ENSCHOG00000003805	SRBD1	82	76.744	Choloepus_hoffmanni
ENSMALG00000001562	si:ch211-117n7.8	94	54.592	ENSCPBG00000005677	SRBD1	99	52.344	Chrysemys_picta_bellii
ENSMALG00000001562	si:ch211-117n7.8	78	39.250	ENSCING00000005950	-	99	39.179	Ciona_intestinalis
ENSMALG00000001562	si:ch211-117n7.8	78	41.162	ENSCSAVG00000000861	-	99	41.162	Ciona_savignyi
ENSMALG00000001562	si:ch211-117n7.8	93	52.567	ENSCANG00000016307	SRBD1	99	50.818	Colobus_angolensis_palliatus
ENSMALG00000001562	si:ch211-117n7.8	99	50.637	ENSCGRG00001000513	Srbd1	99	50.586	Cricetulus_griseus_chok1gshd
ENSMALG00000001562	si:ch211-117n7.8	99	50.637	ENSCGRG00000002283	Srbd1	99	50.586	Cricetulus_griseus_crigri
ENSMALG00000001562	si:ch211-117n7.8	100	72.870	ENSCSEG00000000856	si:ch211-117n7.8	100	72.576	Cynoglossus_semilaevis
ENSMALG00000001562	si:ch211-117n7.8	98	74.925	ENSCVAG00000020212	si:ch211-117n7.8	99	75.326	Cyprinodon_variegatus
ENSMALG00000001562	si:ch211-117n7.8	83	56.287	ENSDNOG00000018686	SRBD1	82	56.272	Dasypus_novemcinctus
ENSMALG00000001562	si:ch211-117n7.8	92	53.236	ENSDORG00000010468	Srbd1	96	53.132	Dipodomys_ordii
ENSMALG00000001562	si:ch211-117n7.8	99	32.008	FBgn0051156	CG31156	99	31.934	Drosophila_melanogaster
ENSMALG00000001562	si:ch211-117n7.8	87	56.934	ENSETEG00000000739	SRBD1	75	56.934	Echinops_telfairi
ENSMALG00000001562	si:ch211-117n7.8	72	48.209	ENSEBUG00000008902	si:ch211-117n7.8	95	48.209	Eptatretus_burgeri
ENSMALG00000001562	si:ch211-117n7.8	93	50.512	ENSEASG00005003132	SRBD1	98	55.056	Equus_asinus_asinus
ENSMALG00000001562	si:ch211-117n7.8	93	52.664	ENSECAG00000013865	SRBD1	98	51.009	Equus_caballus
ENSMALG00000001562	si:ch211-117n7.8	100	65.275	ENSELUG00000012592	si:ch211-117n7.8	100	65.491	Esox_lucius
ENSMALG00000001562	si:ch211-117n7.8	87	54.900	ENSFCAG00000005101	SRBD1	99	51.553	Felis_catus
ENSMALG00000001562	si:ch211-117n7.8	82	57.914	ENSFALG00000012966	SRBD1	100	50.869	Ficedula_albicollis
ENSMALG00000001562	si:ch211-117n7.8	98	52.817	ENSFDAG00000016670	SRBD1	99	52.616	Fukomys_damarensis
ENSMALG00000001562	si:ch211-117n7.8	100	76.803	ENSFHEG00000019480	si:ch211-117n7.8	100	76.608	Fundulus_heteroclitus
ENSMALG00000001562	si:ch211-117n7.8	50	70.188	ENSGMOG00000018010	-	100	70.188	Gadus_morhua
ENSMALG00000001562	si:ch211-117n7.8	82	59.643	ENSGALG00000009990	SRBD1	97	52.935	Gallus_gallus
ENSMALG00000001562	si:ch211-117n7.8	100	76.275	ENSGAFG00000019664	si:ch211-117n7.8	100	76.275	Gambusia_affinis
ENSMALG00000001562	si:ch211-117n7.8	62	82.636	ENSGACG00000010794	si:ch211-117n7.8	100	82.636	Gasterosteus_aculeatus
ENSMALG00000001562	si:ch211-117n7.8	83	59.128	ENSGAGG00000006166	SRBD1	98	58.873	Gopherus_agassizii
ENSMALG00000001562	si:ch211-117n7.8	86	55.505	ENSGGOG00000005910	SRBD1	89	55.404	Gorilla_gorilla
ENSMALG00000001562	si:ch211-117n7.8	97	67.404	ENSHBUG00000013207	si:ch211-117n7.8	100	67.002	Haplochromis_burtoni
ENSMALG00000001562	si:ch211-117n7.8	99	51.236	ENSHGLG00000018153	-	99	51.236	Heterocephalus_glaber_female
ENSMALG00000001562	si:ch211-117n7.8	99	51.039	ENSHGLG00100015183	-	99	51.039	Heterocephalus_glaber_male
ENSMALG00000001562	si:ch211-117n7.8	94	65.177	ENSIPUG00000009661	srbd1	100	64.027	Ictalurus_punctatus
ENSMALG00000001562	si:ch211-117n7.8	99	51.619	ENSSTOG00000005898	SRBD1	99	50.784	Ictidomys_tridecemlineatus
ENSMALG00000001562	si:ch211-117n7.8	99	49.220	ENSJJAG00000022244	Srbd1	99	49.220	Jaculus_jaculus
ENSMALG00000001562	si:ch211-117n7.8	99	79.081	ENSKMAG00000003473	si:ch211-117n7.8	100	78.495	Kryptolebias_marmoratus
ENSMALG00000001562	si:ch211-117n7.8	100	79.435	ENSLBEG00000027518	si:ch211-117n7.8	100	79.045	Labrus_bergylta
ENSMALG00000001562	si:ch211-117n7.8	83	58.167	ENSLACG00000009790	SRBD1	99	57.932	Latimeria_chalumnae
ENSMALG00000001562	si:ch211-117n7.8	95	61.641	ENSLOCG00000016360	si:ch211-117n7.8	99	59.572	Lepisosteus_oculatus
ENSMALG00000001562	si:ch211-117n7.8	93	52.766	ENSMFAG00000042026	SRBD1	99	50.774	Macaca_fascicularis
ENSMALG00000001562	si:ch211-117n7.8	87	55.172	ENSMMUG00000003490	SRBD1	99	50.929	Macaca_mulatta
ENSMALG00000001562	si:ch211-117n7.8	93	51.379	ENSMNEG00000034701	SRBD1	99	49.470	Macaca_nemestrina
ENSMALG00000001562	si:ch211-117n7.8	93	52.567	ENSMLEG00000000745	SRBD1	99	51.122	Mandrillus_leucophaeus
ENSMALG00000001562	si:ch211-117n7.8	100	81.507	ENSMAMG00000021921	si:ch211-117n7.8	100	81.507	Mastacembelus_armatus
ENSMALG00000001562	si:ch211-117n7.8	100	81.738	ENSMZEG00005027369	si:ch211-117n7.8	100	81.445	Maylandia_zebra
ENSMALG00000001562	si:ch211-117n7.8	79	56.650	ENSMGAG00000010273	SRBD1	99	56.650	Meleagris_gallopavo
ENSMALG00000001562	si:ch211-117n7.8	77	55.734	ENSMAUG00000013916	Srbd1	95	55.487	Mesocricetus_auratus
ENSMALG00000001562	si:ch211-117n7.8	94	53.026	ENSMICG00000007835	SRBD1	99	51.354	Microcebus_murinus
ENSMALG00000001562	si:ch211-117n7.8	99	50.690	ENSMOCG00000018716	Srbd1	99	50.591	Microtus_ochrogaster
ENSMALG00000001562	si:ch211-117n7.8	97	77.756	ENSMMOG00000007507	si:ch211-117n7.8	100	78.024	Mola_mola
ENSMALG00000001562	si:ch211-117n7.8	97	51.310	MGP_CAROLIEiJ_G0021934	Srbd1	99	56.678	Mus_caroli
ENSMALG00000001562	si:ch211-117n7.8	98	51.193	ENSMUSG00000024135	Srbd1	96	55.515	Mus_musculus
ENSMALG00000001562	si:ch211-117n7.8	98	50.949	MGP_PahariEiJ_G0020924	Srbd1	98	50.549	Mus_pahari
ENSMALG00000001562	si:ch211-117n7.8	98	51.093	MGP_SPRETEiJ_G0022850	Srbd1	98	51.093	Mus_spretus
ENSMALG00000001562	si:ch211-117n7.8	97	52.092	ENSMLUG00000007039	SRBD1	99	51.550	Myotis_lucifugus
ENSMALG00000001562	si:ch211-117n7.8	98	50.242	ENSNGAG00000011893	Srbd1	98	50.145	Nannospalax_galili
ENSMALG00000001562	si:ch211-117n7.8	98	77.390	ENSNBRG00000012873	si:ch211-117n7.8	100	76.892	Neolamprologus_brichardi
ENSMALG00000001562	si:ch211-117n7.8	86	55.341	ENSNLEG00000016877	SRBD1	99	50.387	Nomascus_leucogenys
ENSMALG00000001562	si:ch211-117n7.8	99	51.140	ENSODEG00000012095	SRBD1	99	51.041	Octodon_degus
ENSMALG00000001562	si:ch211-117n7.8	100	82.031	ENSONIG00000000945	si:ch211-117n7.8	98	86.124	Oreochromis_niloticus
ENSMALG00000001562	si:ch211-117n7.8	93	52.632	ENSOCUG00000015385	SRBD1	99	51.222	Oryctolagus_cuniculus
ENSMALG00000001562	si:ch211-117n7.8	100	71.178	ENSORLG00000004427	si:ch211-117n7.8	100	70.789	Oryzias_latipes
ENSMALG00000001562	si:ch211-117n7.8	100	74.441	ENSORLG00020012792	si:ch211-117n7.8	100	74.052	Oryzias_latipes_hni
ENSMALG00000001562	si:ch211-117n7.8	100	74.514	ENSORLG00015018598	si:ch211-117n7.8	100	74.319	Oryzias_latipes_hsok
ENSMALG00000001562	si:ch211-117n7.8	100	72.303	ENSOMEG00000012229	si:ch211-117n7.8	99	78.030	Oryzias_melastigma
ENSMALG00000001562	si:ch211-117n7.8	98	49.402	ENSOGAG00000001076	SRBD1	98	48.917	Otolemur_garnettii
ENSMALG00000001562	si:ch211-117n7.8	93	49.356	ENSOARG00000005958	SRBD1	99	48.354	Ovis_aries
ENSMALG00000001562	si:ch211-117n7.8	86	55.227	ENSPPAG00000038442	SRBD1	99	50.290	Pan_paniscus
ENSMALG00000001562	si:ch211-117n7.8	87	54.950	ENSPPRG00000003449	SRBD1	99	51.317	Panthera_pardus
ENSMALG00000001562	si:ch211-117n7.8	86	55.455	ENSPTIG00000012495	SRBD1	99	50.584	Panthera_tigris_altaica
ENSMALG00000001562	si:ch211-117n7.8	86	55.455	ENSPTRG00000011889	SRBD1	99	50.484	Pan_troglodytes
ENSMALG00000001562	si:ch211-117n7.8	87	55.172	ENSPANG00000008063	SRBD1	99	51.024	Papio_anubis
ENSMALG00000001562	si:ch211-117n7.8	99	60.449	ENSPKIG00000021973	si:ch211-117n7.8	99	60.058	Paramormyrops_kingsleyae
ENSMALG00000001562	si:ch211-117n7.8	83	58.422	ENSPSIG00000008992	SRBD1	99	50.818	Pelodiscus_sinensis
ENSMALG00000001562	si:ch211-117n7.8	98	71.515	ENSPMGG00000013348	si:ch211-117n7.8	99	72.177	Periophthalmus_magnuspinnatus
ENSMALG00000001562	si:ch211-117n7.8	99	49.371	ENSPEMG00000020684	Srbd1	99	48.936	Peromyscus_maniculatus_bairdii
ENSMALG00000001562	si:ch211-117n7.8	100	76.667	ENSPFOG00000010650	si:ch211-117n7.8	100	76.569	Poecilia_formosa
ENSMALG00000001562	si:ch211-117n7.8	100	76.765	ENSPLAG00000002141	si:ch211-117n7.8	100	76.667	Poecilia_latipinna
ENSMALG00000001562	si:ch211-117n7.8	100	76.863	ENSPMEG00000018537	si:ch211-117n7.8	100	76.765	Poecilia_mexicana
ENSMALG00000001562	si:ch211-117n7.8	100	75.172	ENSPREG00000003258	si:ch211-117n7.8	100	75.074	Poecilia_reticulata
ENSMALG00000001562	si:ch211-117n7.8	86	51.702	ENSPPYG00000012444	SRBD1	99	47.484	Pongo_abelii
ENSMALG00000001562	si:ch211-117n7.8	76	52.086	ENSPCAG00000005629	SRBD1	80	51.905	Procavia_capensis
ENSMALG00000001562	si:ch211-117n7.8	93	45.138	ENSPCOG00000017669	SRBD1	98	44.368	Propithecus_coquereli
ENSMALG00000001562	si:ch211-117n7.8	97	45.946	ENSPVAG00000001782	SRBD1	99	45.712	Pteropus_vampyrus
ENSMALG00000001562	si:ch211-117n7.8	97	75.504	ENSPNYG00000000508	si:ch211-117n7.8	100	75.101	Pundamilia_nyererei
ENSMALG00000001562	si:ch211-117n7.8	92	66.667	ENSPNAG00000013492	SRBD1	99	63.824	Pygocentrus_nattereri
ENSMALG00000001562	si:ch211-117n7.8	83	56.019	ENSRNOG00000014720	Srbd1	97	50.099	Rattus_norvegicus
ENSMALG00000001562	si:ch211-117n7.8	97	50.942	ENSRBIG00000033486	SRBD1	99	50.290	Rhinopithecus_bieti
ENSMALG00000001562	si:ch211-117n7.8	97	50.942	ENSRROG00000041599	SRBD1	99	50.290	Rhinopithecus_roxellana
ENSMALG00000001562	si:ch211-117n7.8	93	52.400	ENSSBOG00000024982	SRBD1	99	51.018	Saimiri_boliviensis_boliviensis
ENSMALG00000001562	si:ch211-117n7.8	85	65.899	ENSSFOG00015001128	si:ch211-117n7.8	88	67.683	Scleropages_formosus
ENSMALG00000001562	si:ch211-117n7.8	100	81.659	ENSSMAG00000018256	si:ch211-117n7.8	100	81.366	Scophthalmus_maximus
ENSMALG00000001562	si:ch211-117n7.8	97	82.626	ENSSLDG00000023189	si:ch211-117n7.8	100	82.922	Seriola_lalandi_dorsalis
ENSMALG00000001562	si:ch211-117n7.8	97	48.543	ENSSARG00000009740	SRBD1	100	47.087	Sorex_araneus
ENSMALG00000001562	si:ch211-117n7.8	83	60.048	ENSSPUG00000010475	SRBD1	91	59.564	Sphenodon_punctatus
ENSMALG00000001562	si:ch211-117n7.8	97	74.002	ENSSPAG00000008092	-	100	74.853	Stegastes_partitus
ENSMALG00000001562	si:ch211-117n7.8	99	51.156	ENSSSCG00000008445	SRBD1	98	51.062	Sus_scrofa
ENSMALG00000001562	si:ch211-117n7.8	82	58.482	ENSTGUG00000003878	SRBD1	98	58.204	Taeniopygia_guttata
ENSMALG00000001562	si:ch211-117n7.8	99	75.367	ENSTRUG00000007080	si:ch211-117n7.8	98	79.481	Takifugu_rubripes
ENSMALG00000001562	si:ch211-117n7.8	98	74.286	ENSTNIG00000007464	si:ch211-117n7.8	98	74.089	Tetraodon_nigroviridis
ENSMALG00000001562	si:ch211-117n7.8	65	79.787	ENSTBEG00000004556	SRBD1	69	79.787	Tupaia_belangeri
ENSMALG00000001562	si:ch211-117n7.8	92	57.672	ENSTTRG00000011871	SRBD1	90	57.609	Tursiops_truncatus
ENSMALG00000001562	si:ch211-117n7.8	88	52.550	ENSUAMG00000008126	SRBD1	97	53.623	Ursus_americanus
ENSMALG00000001562	si:ch211-117n7.8	83	56.958	ENSUMAG00000012902	SRBD1	81	57.074	Ursus_maritimus
ENSMALG00000001562	si:ch211-117n7.8	89	53.779	ENSVPAG00000006825	SRBD1	97	53.568	Vicugna_pacos
ENSMALG00000001562	si:ch211-117n7.8	93	52.626	ENSVVUG00000005389	SRBD1	99	50.386	Vulpes_vulpes
ENSMALG00000001562	si:ch211-117n7.8	98	45.290	ENSXETG00000002760	srbd1	98	44.910	Xenopus_tropicalis
ENSMALG00000001562	si:ch211-117n7.8	100	76.176	ENSXMAG00000016861	si:ch211-117n7.8	100	76.078	Xiphophorus_maculatus