EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000001973 (Gene tree)
Gene ID: 109954839
Gene Symbol: snrnp200
Alias: fb63a09|si:ch211-251j10.5|wu:fb63a09
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 14698 bases
Position: chrKV884700.1:5268052-5282749
Accession: 109954839
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000002744	ResIII	PF04851.15	3.3e-26	1	2
ENSMALP00000002744	ResIII	PF04851.15	3.3e-26	2	2
ENSMALP00000002744	DEAD	PF00270.29	1.9e-53	1	2
ENSMALP00000002744	DEAD	PF00270.29	1.9e-53	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000002823	-	6732	XM_020590459	ENSMALP00000002744	2136 (aa)	XP_020446115	-

Gene Model

Click here to download ENSMALG00000001973's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000001973's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000001973	snrnp200	64	31.684	ENSMALG00000002401	hfm1	82	30.988
ENSMALG00000001973	snrnp200	80	44.068	ENSMALG00000015536	ascc3	83	44.149

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000001973	snrnp200	99	90.684	ENSG00000144028	SNRNP200	99	90.794	Homo_sapiens
ENSMALG00000001973	snrnp200	100	98.034	ENSAPOG00000010223	snrnp200	100	98.034	Acanthochromis_polyacanthus
ENSMALG00000001973	snrnp200	99	90.730	ENSAMEG00000008996	SNRNP200	99	90.841	Ailuropoda_melanoleuca
ENSMALG00000001973	snrnp200	97	97.213	ENSACIG00000001764	snrnp200	98	97.213	Amphilophus_citrinellus
ENSMALG00000001973	snrnp200	100	97.846	ENSAOCG00000024593	snrnp200	100	97.846	Amphiprion_ocellaris
ENSMALG00000001973	snrnp200	97	96.999	ENSAPEG00000012554	snrnp200	100	96.999	Amphiprion_percula
ENSMALG00000001973	snrnp200	100	97.940	ENSATEG00000022522	snrnp200	100	97.940	Anabas_testudineus
ENSMALG00000001973	snrnp200	99	90.759	ENSAPLG00000004313	SNRNP200	99	90.823	Anas_platyrhynchos
ENSMALG00000001973	snrnp200	99	89.930	ENSACAG00000000434	SNRNP200	100	89.930	Anolis_carolinensis
ENSMALG00000001973	snrnp200	99	87.950	ENSANAG00000036625	SNRNP200	99	88.051	Aotus_nancymaae
ENSMALG00000001973	snrnp200	100	97.425	ENSACLG00000011188	snrnp200	100	97.425	Astatotilapia_calliptera
ENSMALG00000001973	snrnp200	99	94.405	ENSAMXG00000005684	snrnp200	99	94.405	Astyanax_mexicanus
ENSMALG00000001973	snrnp200	99	90.496	ENSBTAG00000000848	SNRNP200	99	90.606	Bos_taurus
ENSMALG00000001973	snrnp200	99	90.684	ENSCJAG00000007514	SNRNP200	99	90.794	Callithrix_jacchus
ENSMALG00000001973	snrnp200	99	89.967	ENSCAFG00020019979	SNRNP200	99	91.798	Canis_lupus_dingo
ENSMALG00000001973	snrnp200	99	90.449	ENSCHIG00000020611	SNRNP200	99	90.559	Capra_hircus
ENSMALG00000001973	snrnp200	99	90.730	ENSTSYG00000010467	SNRNP200	99	90.841	Carlito_syrichta
ENSMALG00000001973	snrnp200	99	90.221	ENSCAPG00000017234	SNRNP200	99	90.330	Cavia_aperea
ENSMALG00000001973	snrnp200	99	90.543	ENSCPOG00000006776	SNRNP200	99	90.653	Cavia_porcellus
ENSMALG00000001973	snrnp200	99	90.684	ENSCCAG00000033962	SNRNP200	99	90.794	Cebus_capucinus
ENSMALG00000001973	snrnp200	99	90.684	ENSCATG00000015790	SNRNP200	99	90.794	Cercocebus_atys
ENSMALG00000001973	snrnp200	99	90.590	ENSCLAG00000004116	SNRNP200	99	90.700	Chinchilla_lanigera
ENSMALG00000001973	snrnp200	99	90.684	ENSCSAG00000017369	SNRNP200	99	90.794	Chlorocebus_sabaeus
ENSMALG00000001973	snrnp200	73	92.913	ENSCHOG00000012981	-	58	92.913	Choloepus_hoffmanni
ENSMALG00000001973	snrnp200	99	90.603	ENSCPBG00000022571	SNRNP200	99	95.000	Chrysemys_picta_bellii
ENSMALG00000001973	snrnp200	99	75.735	ENSCING00000005082	-	99	75.972	Ciona_intestinalis
ENSMALG00000001973	snrnp200	94	90.443	ENSCANG00000033932	SNRNP200	99	90.559	Colobus_angolensis_palliatus
ENSMALG00000001973	snrnp200	99	90.684	ENSCGRG00001022610	Snrnp200	99	90.794	Cricetulus_griseus_chok1gshd
ENSMALG00000001973	snrnp200	99	90.182	ENSCGRG00000016472	Snrnp200	99	90.291	Cricetulus_griseus_crigri
ENSMALG00000001973	snrnp200	99	96.251	ENSCSEG00000016399	snrnp200	99	96.378	Cynoglossus_semilaevis
ENSMALG00000001973	snrnp200	100	91.713	ENSCVAG00000017631	snrnp200	100	91.713	Cyprinodon_variegatus
ENSMALG00000001973	snrnp200	100	94.288	ENSDARG00000077536	snrnp200	99	94.311	Danio_rerio
ENSMALG00000001973	snrnp200	99	89.373	ENSDNOG00000011227	SNRNP200	99	89.479	Dasypus_novemcinctus
ENSMALG00000001973	snrnp200	99	88.224	ENSDORG00000005861	Snrnp200	99	88.326	Dipodomys_ordii
ENSMALG00000001973	snrnp200	100	73.883	FBgn0263599	l(3)72Ab	99	74.110	Drosophila_melanogaster
ENSMALG00000001973	snrnp200	95	90.095	ENSETEG00000000162	SNRNP200	74	90.095	Echinops_telfairi
ENSMALG00000001973	snrnp200	83	80.359	ENSEBUG00000016524	snrnp200	95	80.359	Eptatretus_burgeri
ENSMALG00000001973	snrnp200	99	89.744	ENSEASG00005001884	SNRNP200	99	89.757	Equus_asinus_asinus
ENSMALG00000001973	snrnp200	99	90.730	ENSECAG00000019675	SNRNP200	99	90.841	Equus_caballus
ENSMALG00000001973	snrnp200	88	100.000	ENSEEUG00000012178	SNRNP200	93	100.000	Erinaceus_europaeus
ENSMALG00000001973	snrnp200	100	96.350	ENSELUG00000018948	snrnp200	100	96.350	Esox_lucius
ENSMALG00000001973	snrnp200	99	90.777	ENSFCAG00000010699	SNRNP200	99	90.888	Felis_catus
ENSMALG00000001973	snrnp200	93	85.714	ENSFALG00000001368	-	94	85.714	Ficedula_albicollis
ENSMALG00000001973	snrnp200	99	90.496	ENSFDAG00000004683	SNRNP200	99	90.606	Fukomys_damarensis
ENSMALG00000001973	snrnp200	100	94.242	ENSFHEG00000003786	snrnp200	100	94.242	Fundulus_heteroclitus
ENSMALG00000001973	snrnp200	100	95.280	ENSGMOG00000004881	snrnp200	99	95.026	Gadus_morhua
ENSMALG00000001973	snrnp200	100	94.242	ENSGAFG00000010807	snrnp200	100	94.242	Gambusia_affinis
ENSMALG00000001973	snrnp200	100	97.151	ENSGACG00000011474	snrnp200	99	97.151	Gasterosteus_aculeatus
ENSMALG00000001973	snrnp200	95	92.771	ENSGAGG00000016069	SNRNP200	97	98.387	Gopherus_agassizii
ENSMALG00000001973	snrnp200	99	90.684	ENSGGOG00000005174	SNRNP200	99	90.794	Gorilla_gorilla
ENSMALG00000001973	snrnp200	97	94.605	ENSHBUG00000011322	snrnp200	99	94.605	Haplochromis_burtoni
ENSMALG00000001973	snrnp200	99	90.543	ENSHGLG00000006654	SNRNP200	99	90.653	Heterocephalus_glaber_female
ENSMALG00000001973	snrnp200	99	90.543	ENSHGLG00100018594	SNRNP200	99	90.653	Heterocephalus_glaber_male
ENSMALG00000001973	snrnp200	99	90.730	ENSSTOG00000016351	SNRNP200	99	90.841	Ictidomys_tridecemlineatus
ENSMALG00000001973	snrnp200	99	90.449	ENSJJAG00000023659	Snrnp200	99	90.559	Jaculus_jaculus
ENSMALG00000001973	snrnp200	100	94.307	ENSKMAG00000003665	snrnp200	100	94.307	Kryptolebias_marmoratus
ENSMALG00000001973	snrnp200	100	97.472	ENSLBEG00000021585	snrnp200	100	97.472	Labrus_bergylta
ENSMALG00000001973	snrnp200	82	92.206	ENSLACG00000000226	SNRNP200	99	92.339	Latimeria_chalumnae
ENSMALG00000001973	snrnp200	100	94.200	ENSLOCG00000015198	snrnp200	99	94.223	Lepisosteus_oculatus
ENSMALG00000001973	snrnp200	99	90.590	ENSLAFG00000015626	SNRNP200	99	90.700	Loxodonta_africana
ENSMALG00000001973	snrnp200	99	90.637	ENSMFAG00000040174	SNRNP200	99	91.860	Macaca_fascicularis
ENSMALG00000001973	snrnp200	99	90.637	ENSMMUG00000023261	SNRNP200	99	90.747	Macaca_mulatta
ENSMALG00000001973	snrnp200	99	90.590	ENSMNEG00000032398	SNRNP200	99	90.700	Macaca_nemestrina
ENSMALG00000001973	snrnp200	99	90.684	ENSMLEG00000019083	SNRNP200	99	91.860	Mandrillus_leucophaeus
ENSMALG00000001973	snrnp200	100	97.426	ENSMAMG00000007851	snrnp200	100	97.426	Mastacembelus_armatus
ENSMALG00000001973	snrnp200	97	94.605	ENSMZEG00005010787	snrnp200	99	94.605	Maylandia_zebra
ENSMALG00000001973	snrnp200	97	90.469	ENSMGAG00000001831	SNRNP200	99	90.532	Meleagris_gallopavo
ENSMALG00000001973	snrnp200	99	90.730	ENSMAUG00000011825	Snrnp200	99	90.841	Mesocricetus_auratus
ENSMALG00000001973	snrnp200	99	90.730	ENSMICG00000004710	SNRNP200	99	90.841	Microcebus_murinus
ENSMALG00000001973	snrnp200	99	88.764	ENSMOCG00000011814	Snrnp200	99	88.868	Microtus_ochrogaster
ENSMALG00000001973	snrnp200	99	95.534	ENSMMOG00000014167	snrnp200	99	95.534	Mola_mola
ENSMALG00000001973	snrnp200	99	90.637	ENSMODG00000008475	SNRNP200	99	90.700	Monodelphis_domestica
ENSMALG00000001973	snrnp200	99	90.543	MGP_CAROLIEiJ_G0024250	Snrnp200	99	90.653	Mus_caroli
ENSMALG00000001973	snrnp200	99	90.590	ENSMUSG00000003660	Snrnp200	99	90.700	Mus_musculus
ENSMALG00000001973	snrnp200	99	90.637	MGP_PahariEiJ_G0025695	Snrnp200	99	90.747	Mus_pahari
ENSMALG00000001973	snrnp200	99	90.590	MGP_SPRETEiJ_G0025170	Snrnp200	99	92.958	Mus_spretus
ENSMALG00000001973	snrnp200	99	90.777	ENSMPUG00000008949	SNRNP200	99	90.888	Mustela_putorius_furo
ENSMALG00000001973	snrnp200	99	90.323	ENSMLUG00000010493	SNRNP200	99	90.432	Myotis_lucifugus
ENSMALG00000001973	snrnp200	99	87.500	ENSMLUG00000027511	-	99	87.600	Myotis_lucifugus
ENSMALG00000001973	snrnp200	99	90.684	ENSNGAG00000021993	Snrnp200	99	90.794	Nannospalax_galili
ENSMALG00000001973	snrnp200	90	97.272	ENSNBRG00000017960	snrnp200	98	97.272	Neolamprologus_brichardi
ENSMALG00000001973	snrnp200	99	86.378	ENSNLEG00000000025	SNRNP200	99	86.567	Nomascus_leucogenys
ENSMALG00000001973	snrnp200	99	94.845	ENSMEUG00000010532	SNRNP200	78	92.857	Notamacropus_eugenii
ENSMALG00000001973	snrnp200	96	89.591	ENSOPRG00000015464	SNRNP200	96	89.702	Ochotona_princeps
ENSMALG00000001973	snrnp200	99	90.543	ENSODEG00000008366	SNRNP200	99	90.653	Octodon_degus
ENSMALG00000001973	snrnp200	100	97.472	ENSONIG00000010714	snrnp200	100	97.472	Oreochromis_niloticus
ENSMALG00000001973	snrnp200	99	90.637	ENSOCUG00000009864	SNRNP200	99	90.747	Oryctolagus_cuniculus
ENSMALG00000001973	snrnp200	99	96.157	ENSORLG00000012286	snrnp200	99	96.282	Oryzias_latipes
ENSMALG00000001973	snrnp200	99	96.111	ENSORLG00020004648	snrnp200	99	96.145	Oryzias_latipes_hni
ENSMALG00000001973	snrnp200	99	96.157	ENSORLG00015019114	snrnp200	99	96.231	Oryzias_latipes_hsok
ENSMALG00000001973	snrnp200	100	96.395	ENSOMEG00000011834	snrnp200	100	96.395	Oryzias_melastigma
ENSMALG00000001973	snrnp200	99	90.730	ENSOGAG00000006879	SNRNP200	99	90.841	Otolemur_garnettii
ENSMALG00000001973	snrnp200	99	89.799	ENSOARG00000013949	SNRNP200	99	89.906	Ovis_aries
ENSMALG00000001973	snrnp200	99	90.684	ENSPPAG00000041559	SNRNP200	99	90.794	Pan_paniscus
ENSMALG00000001973	snrnp200	99	90.777	ENSPPRG00000004435	SNRNP200	99	90.888	Panthera_pardus
ENSMALG00000001973	snrnp200	99	90.356	ENSPTIG00000006380	SNRNP200	99	90.465	Panthera_tigris_altaica
ENSMALG00000001973	snrnp200	99	90.684	ENSPTRG00000012230	SNRNP200	99	90.794	Pan_troglodytes
ENSMALG00000001973	snrnp200	99	90.637	ENSPANG00000006017	SNRNP200	99	90.747	Papio_anubis
ENSMALG00000001973	snrnp200	100	94.993	ENSPKIG00000014762	snrnp200	99	95.110	Paramormyrops_kingsleyae
ENSMALG00000001973	snrnp200	99	89.799	ENSPSIG00000008580	SNRNP200	99	89.859	Pelodiscus_sinensis
ENSMALG00000001973	snrnp200	99	90.684	ENSPCIG00000023050	SNRNP200	99	90.747	Phascolarctos_cinereus
ENSMALG00000001973	snrnp200	100	96.631	ENSPFOG00000015110	snrnp200	100	96.631	Poecilia_formosa
ENSMALG00000001973	snrnp200	97	96.700	ENSPLAG00000006711	snrnp200	99	96.700	Poecilia_latipinna
ENSMALG00000001973	snrnp200	97	96.645	ENSPMEG00000021166	snrnp200	99	96.645	Poecilia_mexicana
ENSMALG00000001973	snrnp200	100	96.676	ENSPREG00000008875	snrnp200	100	96.676	Poecilia_reticulata
ENSMALG00000001973	snrnp200	99	90.684	ENSPPYG00000012068	SNRNP200	99	90.794	Pongo_abelii
ENSMALG00000001973	snrnp200	97	94.872	ENSPCAG00000008536	SNRNP200	85	97.872	Procavia_capensis
ENSMALG00000001973	snrnp200	99	90.684	ENSPCOG00000024608	SNRNP200	99	90.794	Propithecus_coquereli
ENSMALG00000001973	snrnp200	96	90.993	ENSPVAG00000005860	SNRNP200	92	91.237	Pteropus_vampyrus
ENSMALG00000001973	snrnp200	100	92.670	ENSPNYG00000017476	snrnp200	100	92.670	Pundamilia_nyererei
ENSMALG00000001973	snrnp200	100	90.594	ENSPNAG00000010998	snrnp200	99	90.648	Pygocentrus_nattereri
ENSMALG00000001973	snrnp200	99	90.730	ENSRNOG00000012157	Snrnp200	99	90.841	Rattus_norvegicus
ENSMALG00000001973	snrnp200	99	90.684	ENSRBIG00000044690	-	99	90.794	Rhinopithecus_bieti
ENSMALG00000001973	snrnp200	99	90.684	ENSRROG00000037952	-	99	90.794	Rhinopithecus_roxellana
ENSMALG00000001973	snrnp200	99	90.684	ENSSBOG00000035471	SNRNP200	99	90.794	Saimiri_boliviensis_boliviensis
ENSMALG00000001973	snrnp200	97	90.614	ENSSHAG00000000758	SNRNP200	99	90.630	Sarcophilus_harrisii
ENSMALG00000001973	snrnp200	99	95.254	ENSSFOG00015018826	snrnp200	99	95.254	Scleropages_formosus
ENSMALG00000001973	snrnp200	100	97.566	ENSSMAG00000005463	snrnp200	100	97.566	Scophthalmus_maximus
ENSMALG00000001973	snrnp200	100	98.221	ENSSDUG00000021410	snrnp200	100	98.221	Seriola_dumerili
ENSMALG00000001973	snrnp200	100	98.034	ENSSLDG00000010884	snrnp200	100	98.034	Seriola_lalandi_dorsalis
ENSMALG00000001973	snrnp200	95	89.008	ENSSARG00000010728	SNRNP200	96	88.978	Sorex_araneus
ENSMALG00000001973	snrnp200	99	91.058	ENSSPUG00000003726	-	99	91.123	Sphenodon_punctatus
ENSMALG00000001973	snrnp200	100	98.174	ENSSPAG00000001842	snrnp200	100	98.174	Stegastes_partitus
ENSMALG00000001973	snrnp200	99	90.824	ENSSSCG00000008127	SNRNP200	99	90.935	Sus_scrofa
ENSMALG00000001973	snrnp200	99	82.270	ENSTGUG00000014475	-	100	82.270	Taeniopygia_guttata
ENSMALG00000001973	snrnp200	100	96.723	ENSTRUG00000001307	snrnp200	100	96.723	Takifugu_rubripes
ENSMALG00000001973	snrnp200	99	91.818	ENSTNIG00000004320	snrnp200	99	84.568	Tetraodon_nigroviridis
ENSMALG00000001973	snrnp200	82	92.958	ENSTBEG00000003329	-	67	92.958	Tupaia_belangeri
ENSMALG00000001973	snrnp200	99	90.543	ENSTTRG00000004983	SNRNP200	99	90.653	Tursiops_truncatus
ENSMALG00000001973	snrnp200	75	83.818	ENSUAMG00000008395	-	95	83.527	Ursus_americanus
ENSMALG00000001973	snrnp200	99	90.777	ENSUMAG00000012385	SNRNP200	99	90.888	Ursus_maritimus
ENSMALG00000001973	snrnp200	87	93.361	ENSVPAG00000006434	SNRNP200	66	93.361	Vicugna_pacos
ENSMALG00000001973	snrnp200	99	90.565	ENSVVUG00000026247	SNRNP200	99	90.675	Vulpes_vulpes
ENSMALG00000001973	snrnp200	99	90.505	ENSXETG00000001243	snrnp200	99	90.568	Xenopus_tropicalis
ENSMALG00000001973	snrnp200	97	96.838	ENSXMAG00000002058	snrnp200	98	96.838	Xiphophorus_maculatus