EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000002029 (Gene tree)
Gene ID: 109959635
Gene Symbol: rabl6b
Alias: si:ch211-102c2.5
Full Name: RAB%2C member RAS oncogene family like 6
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 24053 bases
Position: chrKV884728.1:956903-980955
Accession: 109959635
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000002704	MMR_HSR1	PF01926.23	3.6e-05	1	1
ENSMALP00000002746	MMR_HSR1	PF01926.23	3.6e-05	1	1
ENSMALP00000002725	MMR_HSR1	PF01926.23	5.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000002783	-	3901	-	ENSMALP00000002704	743 (aa)	-	UPI0009B429D2
ENSMALT00000002804	-	5562	XM_020599155	ENSMALP00000002725	753 (aa)	XP_020454811	UPI0009B45FBF
ENSMALT00000002840	-	5433	-	ENSMALP00000002761	758 (aa)	-	-
ENSMALT00000002825	-	5532	XM_020599158	ENSMALP00000002746	743 (aa)	XP_020454814	UPI0009B429D2

Gene Model

Click here to download ENSMALG00000002029's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000002029's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000002029	rabl6b	100	79.011	ENSACIG00000010721	rabl6b	100	78.877	Amphilophus_citrinellus
ENSMALG00000002029	rabl6b	100	87.450	ENSATEG00000012055	rabl6b	100	87.450	Anabas_testudineus
ENSMALG00000002029	rabl6b	100	70.596	ENSCSEG00000012430	-	96	77.485	Cynoglossus_semilaevis
ENSMALG00000002029	rabl6b	100	76.903	ENSCSEG00000016135	rabl6b	100	76.640	Cynoglossus_semilaevis
ENSMALG00000002029	rabl6b	100	65.296	ENSELUG00000004448	rabl6b	100	66.452	Esox_lucius
ENSMALG00000002029	rabl6b	100	76.738	ENSGAFG00000013561	rabl6b	100	78.661	Gambusia_affinis
ENSMALG00000002029	rabl6b	100	81.333	ENSGACG00000005242	rabl6b	100	79.200	Gasterosteus_aculeatus
ENSMALG00000002029	rabl6b	100	85.333	ENSHBUG00000014235	rabl6b	100	85.467	Haplochromis_burtoni
ENSMALG00000002029	rabl6b	100	64.796	ENSIPUG00000019266	rabl6	100	65.649	Ictalurus_punctatus
ENSMALG00000002029	rabl6b	84	58.154	ENSLOCG00000001402	rabl6b	96	59.341	Lepisosteus_oculatus
ENSMALG00000002029	rabl6b	100	79.867	ENSMAMG00000019516	rabl6b	100	80.133	Mastacembelus_armatus
ENSMALG00000002029	rabl6b	63	74.526	ENSMZEG00005003942	rabl6b	99	74.737	Maylandia_zebra
ENSMALG00000002029	rabl6b	63	72.881	ENSMMOG00000009459	rabl6b	97	70.402	Mola_mola
ENSMALG00000002029	rabl6b	63	75.738	ENSNBRG00000012512	rabl6b	99	75.738	Neolamprologus_brichardi
ENSMALG00000002029	rabl6b	100	81.016	ENSONIG00000010408	rabl6b	100	83.979	Oreochromis_niloticus
ENSMALG00000002029	rabl6b	100	76.455	ENSORLG00020017557	rabl6b	100	77.381	Oryzias_latipes_hni
ENSMALG00000002029	rabl6b	89	78.338	ENSORLG00015007848	rabl6b	93	79.204	Oryzias_latipes_hsok
ENSMALG00000002029	rabl6b	89	79.970	ENSOMEG00000022840	rabl6b	97	79.674	Oryzias_melastigma
ENSMALG00000002029	rabl6b	100	63.260	ENSPKIG00000007459	RABL6	100	62.338	Paramormyrops_kingsleyae
ENSMALG00000002029	rabl6b	89	59.610	ENSPCIG00000023722	RABL6	92	58.914	Phascolarctos_cinereus
ENSMALG00000002029	rabl6b	100	84.492	ENSPFOG00000003250	rabl6b	100	84.492	Poecilia_formosa
ENSMALG00000002029	rabl6b	100	84.626	ENSPLAG00000019562	rabl6b	100	84.626	Poecilia_latipinna
ENSMALG00000002029	rabl6b	100	82.754	ENSPMEG00000020472	rabl6b	100	82.754	Poecilia_mexicana
ENSMALG00000002029	rabl6b	89	84.431	ENSPREG00000014116	rabl6b	94	84.431	Poecilia_reticulata
ENSMALG00000002029	rabl6b	90	62.826	ENSPNAG00000010857	rabl6b	100	61.170	Pygocentrus_nattereri
ENSMALG00000002029	rabl6b	100	62.119	ENSSFOG00015017388	RABL6	100	63.479	Scleropages_formosus
ENSMALG00000002029	rabl6b	99	62.665	ENSSFOG00015013414	-	99	63.386	Scleropages_formosus
ENSMALG00000002029	rabl6b	88	87.727	ENSSMAG00000012543	rabl6b	97	87.500	Scophthalmus_maximus
ENSMALG00000002029	rabl6b	100	89.186	ENSSDUG00000006564	rabl6b	100	89.052	Seriola_dumerili
ENSMALG00000002029	rabl6b	100	82.620	ENSSPAG00000021033	rabl6b	96	89.072	Stegastes_partitus
ENSMALG00000002029	rabl6b	99	72.691	ENSTNIG00000010595	rabl6b	100	73.219	Tetraodon_nigroviridis