EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000002275 (Gene tree)
Gene ID: 109964751
Gene Symbol: snrnp70
Alias: U1 small ribonucleoprotein 70kd|snrp70|wu:fc20b04|zgc:136450
Full Name: protein lin-7 homolog B
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 22910 bases
Position: chrKV884780.1:1060818-1083727
Accession: 109964751
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000003112	RRM_1	PF00076.22	1.7e-19	1	1
ENSMALP00000003112	U1snRNP70_N	PF12220.8	7.8e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000003157	-	1329	-	ENSMALP00000003074	220 (aa)	-	UPI0009B3CC33
ENSMALT00000003196	-	2114	-	ENSMALP00000003112	509 (aa)	-	-
ENSMALT00000003160	-	1363	XM_020608288	ENSMALP00000003077	220 (aa)	XP_020463944	UPI0009B3CC33

Gene Model

Click here to download ENSMALG00000002275's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000002275's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000002275	snrnp70	90	88.646	ENSACIG00000017909	snrnp70	74	92.197	Amphilophus_citrinellus
ENSMALG00000002275	snrnp70	90	83.224	ENSAPEG00000006219	snrnp70	74	88.252	Amphiprion_percula
ENSMALG00000002275	snrnp70	90	83.991	ENSATEG00000008748	snrnp70	73	86.628	Anabas_testudineus
ENSMALG00000002275	snrnp70	90	84.267	ENSACLG00000011144	snrnp70	74	88.920	Astatotilapia_calliptera
ENSMALG00000002275	snrnp70	89	78.993	ENSFHEG00000010298	snrnp70	74	86.705	Fundulus_heteroclitus
ENSMALG00000002275	snrnp70	89	81.798	ENSGAFG00000003395	snrnp70	74	83.526	Gambusia_affinis
ENSMALG00000002275	snrnp70	90	86.652	ENSHBUG00000018856	snrnp70	74	91.304	Haplochromis_burtoni
ENSMALG00000002275	snrnp70	88	79.556	ENSHCOG00000010270	snrnp70	98	78.525	Hippocampus_comes
ENSMALG00000002275	snrnp70	90	90.393	ENSMAMG00000004556	snrnp70	73	92.754	Mastacembelus_armatus
ENSMALG00000002275	snrnp70	90	85.777	ENSMZEG00005022849	snrnp70	74	91.304	Maylandia_zebra
ENSMALG00000002275	snrnp70	89	82.174	ENSORLG00000017158	snrnp70	75	86.571	Oryzias_latipes
ENSMALG00000002275	snrnp70	89	81.739	ENSORLG00015010817	snrnp70	75	86.571	Oryzias_latipes_hsok
ENSMALG00000002275	snrnp70	89	85.934	ENSOMEG00000013002	snrnp70	74	88.696	Oryzias_melastigma
ENSMALG00000002275	snrnp70	89	84.615	ENSPFOG00000016671	snrnp70	74	86.377	Poecilia_formosa
ENSMALG00000002275	snrnp70	89	84.396	ENSPLAG00000005912	snrnp70	74	86.087	Poecilia_latipinna
ENSMALG00000002275	snrnp70	89	84.615	ENSPMEG00000008496	snrnp70	74	86.377	Poecilia_mexicana
ENSMALG00000002275	snrnp70	89	84.396	ENSPREG00000005486	snrnp70	74	86.087	Poecilia_reticulata
ENSMALG00000002275	snrnp70	90	86.652	ENSPNYG00000003258	snrnp70	74	91.304	Pundamilia_nyererei
ENSMALG00000002275	snrnp70	90	77.681	ENSSMAG00000013978	snrnp70	98	81.705	Scophthalmus_maximus
ENSMALG00000002275	snrnp70	68	88.696	ENSTRUG00000009202	snrnp70	74	88.696	Takifugu_rubripes
ENSMALG00000002275	snrnp70	90	79.869	ENSXMAG00000012789	snrnp70	74	85.797	Xiphophorus_maculatus