EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000002401 (Gene tree)
Gene ID: -
Gene Symbol: hfm1
Alias: si:ch211-83f14.5
Full Name: HFM1%2C ATP dependent DNA helicase homolog
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 12372 bases
Position: chrKV884860.1:2873813-2886184
Accession: 109969291
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000003365	ResIII	PF04851.15	2.6e-11	1	1
ENSMALP00000003418	ResIII	PF04851.15	1e-09	1	1
ENSMALP00000003365	DEAD	PF00270.29	6.2e-28	1	1
ENSMALP00000003418	DEAD	PF00270.29	8e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000003452	-	3114	XM_020616038	ENSMALP00000003365	1037 (aa)	XP_020471694	-
ENSMALT00000003506	-	2544	-	ENSMALP00000003418	848 (aa)	-	-

Gene Model

Click here to download ENSMALG00000002401's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000002401's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000002401	hfm1	81	32.584	ENSMALG00000015536	ascc3	63	32.584
ENSMALG00000002401	hfm1	82	30.988	ENSMALG00000001973	snrnp200	64	31.684

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000002401	hfm1	96	65.618	ENSG00000162669	HFM1	65	64.354	Homo_sapiens
ENSMALG00000002401	hfm1	100	87.413	ENSAPOG00000005304	hfm1	100	87.413	Acanthochromis_polyacanthus
ENSMALG00000002401	hfm1	94	66.787	ENSAMEG00000000432	HFM1	65	63.859	Ailuropoda_melanoleuca
ENSMALG00000002401	hfm1	99	78.647	ENSACIG00000021553	hfm1	95	78.261	Amphilophus_citrinellus
ENSMALG00000002401	hfm1	100	88.605	ENSAOCG00000022839	hfm1	100	88.605	Amphiprion_ocellaris
ENSMALG00000002401	hfm1	100	88.915	ENSAPEG00000014316	hfm1	100	88.915	Amphiprion_percula
ENSMALG00000002401	hfm1	98	83.962	ENSATEG00000019181	hfm1	87	83.352	Anabas_testudineus
ENSMALG00000002401	hfm1	98	64.971	ENSAPLG00000013639	HFM1	65	64.839	Anas_platyrhynchos
ENSMALG00000002401	hfm1	96	64.527	ENSANAG00000029513	HFM1	64	64.629	Aotus_nancymaae
ENSMALG00000002401	hfm1	99	83.688	ENSACLG00000009033	hfm1	100	83.688	Astatotilapia_calliptera
ENSMALG00000002401	hfm1	100	75.151	ENSAMXG00000006108	hfm1	66	71.172	Astyanax_mexicanus
ENSMALG00000002401	hfm1	99	64.626	ENSBTAG00000020856	HFM1	70	61.089	Bos_taurus
ENSMALG00000002401	hfm1	96	65.070	ENSCJAG00000001843	HFM1	65	64.026	Callithrix_jacchus
ENSMALG00000002401	hfm1	94	66.627	ENSCAFG00000020187	HFM1	65	63.501	Canis_familiaris
ENSMALG00000002401	hfm1	94	66.226	ENSTSYG00000014250	HFM1	65	63.152	Carlito_syrichta
ENSMALG00000002401	hfm1	94	65.584	ENSCPOG00000007421	HFM1	66	63.169	Cavia_porcellus
ENSMALG00000002401	hfm1	96	64.720	ENSCCAG00000033206	HFM1	65	63.394	Cebus_capucinus
ENSMALG00000002401	hfm1	100	66.546	ENSCATG00000030987	HFM1	65	63.859	Cercocebus_atys
ENSMALG00000002401	hfm1	95	66.221	ENSCLAG00000005173	HFM1	63	62.927	Chinchilla_lanigera
ENSMALG00000002401	hfm1	78	50.838	ENSCSAVG00000005094	-	100	52.786	Ciona_savignyi
ENSMALG00000002401	hfm1	91	63.184	ENSCGRG00001016995	Hfm1	65	59.718	Cricetulus_griseus_chok1gshd
ENSMALG00000002401	hfm1	94	65.102	ENSCGRG00000017181	Hfm1	70	58.916	Cricetulus_griseus_crigri
ENSMALG00000002401	hfm1	95	84.512	ENSCSEG00000017659	hfm1	90	84.512	Cynoglossus_semilaevis
ENSMALG00000002401	hfm1	80	80.872	ENSCVAG00000005075	hfm1	86	83.966	Cyprinodon_variegatus
ENSMALG00000002401	hfm1	100	74.572	ENSDARG00000104288	hfm1	81	74.572	Danio_rerio
ENSMALG00000002401	hfm1	93	65.614	ENSDNOG00000004776	HFM1	62	63.023	Dasypus_novemcinctus
ENSMALG00000002401	hfm1	94	64.623	ENSDORG00000014661	Hfm1	65	61.990	Dipodomys_ordii
ENSMALG00000002401	hfm1	91	67.207	ENSEASG00005015424	HFM1	95	61.196	Equus_asinus_asinus
ENSMALG00000002401	hfm1	94	67.148	ENSECAG00000024039	HFM1	63	64.454	Equus_caballus
ENSMALG00000002401	hfm1	100	79.535	ENSELUG00000018944	hfm1	98	79.535	Esox_lucius
ENSMALG00000002401	hfm1	94	66.546	ENSFCAG00000029116	HFM1	69	60.753	Felis_catus
ENSMALG00000002401	hfm1	96	65.529	ENSFALG00000001781	HFM1	65	64.423	Ficedula_albicollis
ENSMALG00000002401	hfm1	96	64.569	ENSFDAG00000020816	HFM1	63	63.169	Fukomys_damarensis
ENSMALG00000002401	hfm1	94	75.030	ENSGMOG00000017436	hfm1	99	70.459	Gadus_morhua
ENSMALG00000002401	hfm1	99	81.112	ENSGAFG00000018093	hfm1	100	81.112	Gambusia_affinis
ENSMALG00000002401	hfm1	94	82.317	ENSGACG00000015686	hfm1	99	76.836	Gasterosteus_aculeatus
ENSMALG00000002401	hfm1	96	65.501	ENSGGOG00000038524	HFM1	65	64.133	Gorilla_gorilla
ENSMALG00000002401	hfm1	94	83.333	ENSHBUG00000007309	hfm1	97	77.454	Haplochromis_burtoni
ENSMALG00000002401	hfm1	99	81.123	ENSHCOG00000019632	hfm1	100	81.123	Hippocampus_comes
ENSMALG00000002401	hfm1	99	73.678	ENSIPUG00000017020	hfm1	98	73.678	Ictalurus_punctatus
ENSMALG00000002401	hfm1	96	63.636	ENSJJAG00000017198	Hfm1	66	61.727	Jaculus_jaculus
ENSMALG00000002401	hfm1	94	82.310	ENSKMAG00000002282	hfm1	85	84.135	Kryptolebias_marmoratus
ENSMALG00000002401	hfm1	100	85.495	ENSLBEG00000006759	hfm1	99	85.495	Labrus_bergylta
ENSMALG00000002401	hfm1	94	69.028	ENSLACG00000010698	HFM1	89	65.751	Latimeria_chalumnae
ENSMALG00000002401	hfm1	94	73.077	ENSLOCG00000004931	hfm1	87	69.777	Lepisosteus_oculatus
ENSMALG00000002401	hfm1	78	66.049	ENSLAFG00000015903	-	90	70.939	Loxodonta_africana
ENSMALG00000002401	hfm1	100	64.010	ENSMFAG00000003649	HFM1	65	60.699	Macaca_fascicularis
ENSMALG00000002401	hfm1	100	66.546	ENSMMUG00000006819	HFM1	65	63.966	Macaca_mulatta
ENSMALG00000002401	hfm1	99	87.279	ENSMAMG00000004623	hfm1	100	87.279	Mastacembelus_armatus
ENSMALG00000002401	hfm1	99	83.688	ENSMZEG00005004679	hfm1	100	83.688	Maylandia_zebra
ENSMALG00000002401	hfm1	86	65.971	ENSMGAG00000008437	HFM1	93	69.826	Meleagris_gallopavo
ENSMALG00000002401	hfm1	96	63.753	ENSMAUG00000018858	Hfm1	65	62.260	Mesocricetus_auratus
ENSMALG00000002401	hfm1	96	65.192	ENSMICG00000037935	HFM1	67	62.733	Microcebus_murinus
ENSMALG00000002401	hfm1	95	64.923	ENSMOCG00000014812	Hfm1	65	62.580	Microtus_ochrogaster
ENSMALG00000002401	hfm1	100	87.442	ENSMMOG00000006148	hfm1	99	87.442	Mola_mola
ENSMALG00000002401	hfm1	88	72.034	MGP_CAROLIEiJ_G0027496	Hfm1	60	72.034	Mus_caroli
ENSMALG00000002401	hfm1	96	63.594	ENSMUSG00000043410	Hfm1	65	62.527	Mus_musculus
ENSMALG00000002401	hfm1	96	63.827	MGP_PahariEiJ_G0017268	Hfm1	70	59.028	Mus_pahari
ENSMALG00000002401	hfm1	96	64.061	MGP_SPRETEiJ_G0028495	Hfm1	70	59.446	Mus_spretus
ENSMALG00000002401	hfm1	94	66.546	ENSMPUG00000004594	HFM1	63	63.821	Mustela_putorius_furo
ENSMALG00000002401	hfm1	94	66.065	ENSMLUG00000010200	HFM1	65	63.383	Myotis_lucifugus
ENSMALG00000002401	hfm1	99	82.256	ENSNBRG00000002910	hfm1	100	82.256	Neolamprologus_brichardi
ENSMALG00000002401	hfm1	96	63.944	ENSNLEG00000010285	HFM1	57	67.647	Nomascus_leucogenys
ENSMALG00000002401	hfm1	87	59.797	ENSMEUG00000015788	HFM1	59	59.797	Notamacropus_eugenii
ENSMALG00000002401	hfm1	94	62.094	ENSOPRG00000013916	HFM1	57	63.469	Ochotona_princeps
ENSMALG00000002401	hfm1	94	84.383	ENSONIG00000010590	hfm1	96	76.984	Oreochromis_niloticus
ENSMALG00000002401	hfm1	92	83.969	ENSORLG00000026844	hfm1	99	83.969	Oryzias_latipes
ENSMALG00000002401	hfm1	100	69.490	ENSORLG00020002951	hfm1	72	69.490	Oryzias_latipes_hni
ENSMALG00000002401	hfm1	100	78.331	ENSOMEG00000016474	hfm1	65	78.028	Oryzias_melastigma
ENSMALG00000002401	hfm1	96	64.959	ENSOGAG00000032369	HFM1	76	63.636	Otolemur_garnettii
ENSMALG00000002401	hfm1	94	67.509	ENSOARG00000015812	HFM1	65	64.775	Ovis_aries
ENSMALG00000002401	hfm1	96	65.851	ENSPPAG00000024582	HFM1	70	64.568	Pan_paniscus
ENSMALG00000002401	hfm1	94	66.546	ENSPPRG00000003270	HFM1	69	60.555	Panthera_pardus
ENSMALG00000002401	hfm1	94	66.546	ENSPTIG00000018881	HFM1	69	60.654	Panthera_tigris_altaica
ENSMALG00000002401	hfm1	94	67.148	ENSPTRG00000000948	HFM1	65	64.461	Pan_troglodytes
ENSMALG00000002401	hfm1	100	66.426	ENSPANG00000009838	HFM1	65	63.753	Papio_anubis
ENSMALG00000002401	hfm1	98	72.619	ENSPKIG00000003810	hfm1	99	72.619	Paramormyrops_kingsleyae
ENSMALG00000002401	hfm1	94	82.286	ENSPMGG00000011059	hfm1	100	82.286	Periophthalmus_magnuspinnatus
ENSMALG00000002401	hfm1	96	63.477	ENSPEMG00000022852	Hfm1	65	62.379	Peromyscus_maniculatus_bairdii
ENSMALG00000002401	hfm1	94	65.629	ENSPCIG00000014233	HFM1	63	62.513	Phascolarctos_cinereus
ENSMALG00000002401	hfm1	94	81.477	ENSPFOG00000017194	hfm1	100	73.594	Poecilia_formosa
ENSMALG00000002401	hfm1	94	81.159	ENSPLAG00000000571	hfm1	94	72.927	Poecilia_latipinna
ENSMALG00000002401	hfm1	94	81.280	ENSPMEG00000019475	hfm1	95	74.349	Poecilia_mexicana
ENSMALG00000002401	hfm1	99	81.185	ENSPREG00000007803	hfm1	100	81.185	Poecilia_reticulata
ENSMALG00000002401	hfm1	96	65.618	ENSPPYG00000001163	HFM1	65	64.141	Pongo_abelii
ENSMALG00000002401	hfm1	96	60.443	ENSPVAG00000009713	HFM1	66	57.816	Pteropus_vampyrus
ENSMALG00000002401	hfm1	99	83.353	ENSPNYG00000001795	hfm1	100	83.353	Pundamilia_nyererei
ENSMALG00000002401	hfm1	100	76.894	ENSPNAG00000010865	hfm1	89	76.894	Pygocentrus_nattereri
ENSMALG00000002401	hfm1	96	63.986	ENSRNOG00000023299	Hfm1	65	62.927	Rattus_norvegicus
ENSMALG00000002401	hfm1	100	66.667	ENSRROG00000045569	HFM1	65	64.034	Rhinopithecus_roxellana
ENSMALG00000002401	hfm1	96	65.304	ENSSBOG00000027456	HFM1	66	63.927	Saimiri_boliviensis_boliviensis
ENSMALG00000002401	hfm1	67	67.568	ENSSHAG00000014616	-	69	69.180	Sarcophilus_harrisii
ENSMALG00000002401	hfm1	100	74.940	ENSSFOG00015020129	hfm1	59	78.721	Scleropages_formosus
ENSMALG00000002401	hfm1	94	86.418	ENSSMAG00000006907	hfm1	81	89.952	Scophthalmus_maximus
ENSMALG00000002401	hfm1	100	90.000	ENSSDUG00000011424	hfm1	100	90.000	Seriola_dumerili
ENSMALG00000002401	hfm1	100	88.417	ENSSLDG00000016386	hfm1	100	88.417	Seriola_lalandi_dorsalis
ENSMALG00000002401	hfm1	100	88.140	ENSSPAG00000001023	hfm1	100	88.140	Stegastes_partitus
ENSMALG00000002401	hfm1	94	67.268	ENSSSCG00000006912	HFM1	68	64.072	Sus_scrofa
ENSMALG00000002401	hfm1	94	66.667	ENSTGUG00000006172	HFM1	97	63.694	Taeniopygia_guttata
ENSMALG00000002401	hfm1	54	83.153	ENSTNIG00000006962	hfm1	96	83.156	Tetraodon_nigroviridis
ENSMALG00000002401	hfm1	94	66.667	ENSTTRG00000013933	HFM1	66	64.194	Tursiops_truncatus
ENSMALG00000002401	hfm1	94	64.260	ENSVPAG00000011331	HFM1	70	58.754	Vicugna_pacos
ENSMALG00000002401	hfm1	92	66.337	ENSVVUG00000020760	HFM1	88	65.440	Vulpes_vulpes
ENSMALG00000002401	hfm1	99	80.712	ENSXMAG00000004178	hfm1	100	80.712	Xiphophorus_maculatus