EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000002560 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: zinc finger matrin-type protein 1-like
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 8837 bases
Position: chrKV884706.1:4890069-4898905
Accession: 109956274
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000003485	zf-met	PF12874.7	2e-19	1	3
ENSMALP00000003485	zf-met	PF12874.7	2e-19	2	3
ENSMALP00000003485	zf-met	PF12874.7	2e-19	3	3
ENSMALP00000003518	zf-met	PF12874.7	2.1e-11	1	2
ENSMALP00000003518	zf-met	PF12874.7	2.1e-11	2	2
ENSMALP00000003505	zf-met	PF12874.7	2.1e-11	1	2
ENSMALP00000003505	zf-met	PF12874.7	2.1e-11	2	2
ENSMALP00000003485	zf-C2H2_jaz	PF12171.8	1.4e-13	1	1
ENSMALP00000003518	zf-C2H2_jaz	PF12171.8	1.1e-09	1	1
ENSMALP00000003505	zf-C2H2_jaz	PF12171.8	1.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000003597	-	3180	-	ENSMALP00000003505	491 (aa)	-	-
ENSMALT00000003611	-	3180	-	ENSMALP00000003518	491 (aa)	-	-
ENSMALT00000003576	-	3891	XM_020593251	ENSMALP00000003485	505 (aa)	XP_020448907	-

Gene Model

Click here to download ENSMALG00000002560's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000002560's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000002560	-	100	65.759	ENSAPOG00000002875	-	94	67.315	Acanthochromis_polyacanthus
ENSMALG00000002560	-	100	68.677	ENSAOCG00000007093	-	94	64.471	Amphiprion_ocellaris
ENSMALG00000002560	-	100	67.573	ENSATEG00000023589	-	83	65.049	Anabas_testudineus
ENSMALG00000002560	-	99	62.083	ENSACLG00000012751	-	83	59.921	Astatotilapia_calliptera
ENSMALG00000002560	-	97	46.881	ENSCVAG00000018034	-	59	51.299	Cyprinodon_variegatus
ENSMALG00000002560	-	58	45.017	ENSGMOG00000008972	-	71	45.333	Gadus_morhua
ENSMALG00000002560	-	96	55.242	ENSGACG00000009018	-	99	56.942	Gasterosteus_aculeatus
ENSMALG00000002560	-	99	61.493	ENSHBUG00000020963	-	83	61.297	Haplochromis_burtoni
ENSMALG00000002560	-	96	46.029	ENSHCOG00000013075	-	95	49.084	Hippocampus_comes
ENSMALG00000002560	-	97	41.569	ENSIPUG00000011933	-	50	47.020	Ictalurus_punctatus
ENSMALG00000002560	-	100	62.451	ENSLBEG00000027221	-	81	62.257	Labrus_bergylta
ENSMALG00000002560	-	99	61.886	ENSMZEG00005026847	-	83	59.725	Maylandia_zebra
ENSMALG00000002560	-	85	63.084	ENSMMOG00000012396	-	80	61.215	Mola_mola
ENSMALG00000002560	-	97	62.475	ENSSMAG00000009994	-	94	63.796	Scophthalmus_maximus
ENSMALG00000002560	-	100	70.229	ENSSDUG00000022406	-	83	71.456	Seriola_dumerili
ENSMALG00000002560	-	100	65.631	ENSSPAG00000018876	-	100	68.411	Stegastes_partitus