EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000002663 (Gene tree)
Gene ID: 109967603
Gene Symbol: UPF2
Alias: DKFZP434D222|KIAA1408|RENT2|smg-3
Full Name: UPF2%2C regulator of nonsense mediated mRNA decay
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 14649 bases
Position: chrKV884820.1:1397887-1412535
Accession: 109967603
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000003672	Upf2	PF04050.14	8.7e-32	1	1
ENSMALP00000003672	MIF4G	PF02854.19	3.4e-76	1	3
ENSMALP00000003672	MIF4G	PF02854.19	3.4e-76	2	3
ENSMALP00000003672	MIF4G	PF02854.19	3.4e-76	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000003766	UPF2-201	3771	XM_020613313	ENSMALP00000003672	1256 (aa)	XP_020468969	-

Gene Model

Click here to download ENSMALG00000002663's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb03013	RNA transport	KEGG
malb03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000002663's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000002663	UPF2	100	82.003	ENSG00000151461	UPF2	99	82.031	Homo_sapiens
ENSMALG00000002663	UPF2	100	91.799	ENSAPOG00000015837	UPF2	100	91.640	Acanthochromis_polyacanthus
ENSMALG00000002663	UPF2	100	82.694	ENSAMEG00000004586	UPF2	99	82.799	Ailuropoda_melanoleuca
ENSMALG00000002663	UPF2	100	94.749	ENSACIG00000018078	UPF2	100	94.749	Amphilophus_citrinellus
ENSMALG00000002663	UPF2	100	94.505	ENSAOCG00000016766	UPF2	99	94.349	Amphiprion_ocellaris
ENSMALG00000002663	UPF2	100	94.584	ENSAPEG00000019084	UPF2	99	94.427	Amphiprion_percula
ENSMALG00000002663	UPF2	100	95.376	ENSATEG00000021677	UPF2	99	95.376	Anabas_testudineus
ENSMALG00000002663	UPF2	100	79.117	ENSAPLG00000010287	UPF2	90	83.871	Anas_platyrhynchos
ENSMALG00000002663	UPF2	100	82.302	ENSACAG00000009259	UPF2	99	82.330	Anolis_carolinensis
ENSMALG00000002663	UPF2	91	78.522	ENSANAG00000028451	UPF2	93	78.632	Aotus_nancymaae
ENSMALG00000002663	UPF2	100	94.749	ENSACLG00000012696	UPF2	99	94.749	Astatotilapia_calliptera
ENSMALG00000002663	UPF2	100	87.940	ENSAMXG00000013700	UPF2	99	87.784	Astyanax_mexicanus
ENSMALG00000002663	UPF2	100	82.694	ENSBTAG00000000288	UPF2	99	82.721	Bos_taurus
ENSMALG00000002663	UPF2	100	81.676	ENSCJAG00000020685	UPF2	99	81.314	Callithrix_jacchus
ENSMALG00000002663	UPF2	100	82.850	ENSCAFG00000004839	UPF2	99	82.877	Canis_familiaris
ENSMALG00000002663	UPF2	100	81.300	ENSCAFG00020005882	UPF2	98	83.988	Canis_lupus_dingo
ENSMALG00000002663	UPF2	100	82.616	ENSCHIG00000020359	UPF2	99	82.643	Capra_hircus
ENSMALG00000002663	UPF2	100	82.302	ENSTSYG00000000935	UPF2	99	82.330	Carlito_syrichta
ENSMALG00000002663	UPF2	91	73.928	ENSCAPG00000016658	UPF2	95	73.504	Cavia_aperea
ENSMALG00000002663	UPF2	99	79.590	ENSCPOG00000008809	UPF2	100	79.386	Cavia_porcellus
ENSMALG00000002663	UPF2	100	75.489	ENSCCAG00000035991	UPF2	99	75.215	Cebus_capucinus
ENSMALG00000002663	UPF2	100	82.160	ENSCATG00000032679	UPF2	99	82.188	Cercocebus_atys
ENSMALG00000002663	UPF2	100	81.505	ENSCLAG00000011434	UPF2	99	81.299	Chinchilla_lanigera
ENSMALG00000002663	UPF2	100	82.160	ENSCSAG00000013372	UPF2	99	82.188	Chlorocebus_sabaeus
ENSMALG00000002663	UPF2	80	89.135	ENSCHOG00000000422	UPF2	81	87.805	Choloepus_hoffmanni
ENSMALG00000002663	UPF2	100	80.941	ENSCPBG00000027823	UPF2	100	80.893	Chrysemys_picta_bellii
ENSMALG00000002663	UPF2	78	48.917	ENSCSAVG00000007772	-	100	46.339	Ciona_savignyi
ENSMALG00000002663	UPF2	100	77.533	ENSCANG00000040396	UPF2	100	77.127	Colobus_angolensis_palliatus
ENSMALG00000002663	UPF2	100	82.302	ENSCGRG00001019347	Upf2	99	82.017	Cricetulus_griseus_chok1gshd
ENSMALG00000002663	UPF2	100	82.302	ENSCGRG00000017993	Upf2	99	82.017	Cricetulus_griseus_crigri
ENSMALG00000002663	UPF2	99	86.846	ENSCSEG00000003520	UPF2	99	85.816	Cynoglossus_semilaevis
ENSMALG00000002663	UPF2	99	92.095	ENSCVAG00000006167	UPF2	100	92.016	Cyprinodon_variegatus
ENSMALG00000002663	UPF2	100	82.459	ENSDNOG00000018160	UPF2	99	82.565	Dasypus_novemcinctus
ENSMALG00000002663	UPF2	100	82.224	ENSDORG00000002478	Upf2	99	81.939	Dipodomys_ordii
ENSMALG00000002663	UPF2	72	92.647	ENSETEG00000011583	-	62	92.647	Echinops_telfairi
ENSMALG00000002663	UPF2	65	72.848	ENSEBUG00000012448	-	87	72.848	Eptatretus_burgeri
ENSMALG00000002663	UPF2	100	81.740	ENSEASG00005019274	UPF2	99	81.671	Equus_asinus_asinus
ENSMALG00000002663	UPF2	100	81.740	ENSECAG00000017022	UPF2	99	81.847	Equus_caballus
ENSMALG00000002663	UPF2	82	73.163	ENSEEUG00000007819	UPF2	74	75.120	Erinaceus_europaeus
ENSMALG00000002663	UPF2	100	88.583	ENSELUG00000012014	UPF2	99	90.307	Esox_lucius
ENSMALG00000002663	UPF2	100	83.425	ENSFCAG00000005785	UPF2	99	82.486	Felis_catus
ENSMALG00000002663	UPF2	100	83.672	ENSFALG00000001889	UPF2	98	83.672	Ficedula_albicollis
ENSMALG00000002663	UPF2	100	80.956	ENSFDAG00000014348	UPF2	99	80.643	Fukomys_damarensis
ENSMALG00000002663	UPF2	99	92.722	ENSFHEG00000009826	UPF2	99	92.642	Fundulus_heteroclitus
ENSMALG00000002663	UPF2	91	88.648	ENSGMOG00000005557	UPF2	100	87.959	Gadus_morhua
ENSMALG00000002663	UPF2	100	83.959	ENSGALG00000033772	UPF2	99	83.672	Gallus_gallus
ENSMALG00000002663	UPF2	100	91.915	ENSGAFG00000020867	UPF2	99	91.837	Gambusia_affinis
ENSMALG00000002663	UPF2	100	91.765	ENSGACG00000001080	UPF2	100	93.020	Gasterosteus_aculeatus
ENSMALG00000002663	UPF2	100	82.238	ENSGAGG00000002700	UPF2	99	80.547	Gopherus_agassizii
ENSMALG00000002663	UPF2	100	82.003	ENSGGOG00000001479	UPF2	99	82.031	Gorilla_gorilla
ENSMALG00000002663	UPF2	100	94.828	ENSHBUG00000004249	UPF2	100	94.828	Haplochromis_burtoni
ENSMALG00000002663	UPF2	100	72.684	ENSHGLG00000003822	-	99	72.920	Heterocephalus_glaber_female
ENSMALG00000002663	UPF2	100	81.191	ENSHGLG00000015176	-	99	81.221	Heterocephalus_glaber_female
ENSMALG00000002663	UPF2	100	78.840	ENSHGLG00100010036	UPF2	100	78.795	Heterocephalus_glaber_male
ENSMALG00000002663	UPF2	100	89.289	ENSHCOG00000004025	UPF2	99	89.289	Hippocampus_comes
ENSMALG00000002663	UPF2	100	86.865	ENSIPUG00000015524	UPF2	99	84.988	Ictalurus_punctatus
ENSMALG00000002663	UPF2	100	82.146	ENSSTOG00000013075	UPF2	99	81.939	Ictidomys_tridecemlineatus
ENSMALG00000002663	UPF2	100	81.206	ENSJJAG00000004913	Upf2	99	81.754	Jaculus_jaculus
ENSMALG00000002663	UPF2	99	92.180	ENSKMAG00000001071	UPF2	99	93.049	Kryptolebias_marmoratus
ENSMALG00000002663	UPF2	100	93.417	ENSLBEG00000016394	-	99	93.966	Labrus_bergylta
ENSMALG00000002663	UPF2	80	93.571	ENSLBEG00000000728	-	93	93.571	Labrus_bergylta
ENSMALG00000002663	UPF2	99	76.053	ENSLACG00000015945	UPF2	99	76.365	Latimeria_chalumnae
ENSMALG00000002663	UPF2	99	87.313	ENSLOCG00000015698	UPF2	99	87.313	Lepisosteus_oculatus
ENSMALG00000002663	UPF2	100	82.160	ENSMFAG00000043865	UPF2	99	82.188	Macaca_fascicularis
ENSMALG00000002663	UPF2	100	82.160	ENSMMUG00000008241	UPF2	99	82.188	Macaca_mulatta
ENSMALG00000002663	UPF2	81	83.057	ENSMNEG00000008062	UPF2	99	83.497	Macaca_nemestrina
ENSMALG00000002663	UPF2	100	80.189	ENSMLEG00000036120	UPF2	100	79.844	Mandrillus_leucophaeus
ENSMALG00000002663	UPF2	100	95.298	ENSMAMG00000018276	UPF2	99	95.298	Mastacembelus_armatus
ENSMALG00000002663	UPF2	100	94.749	ENSMZEG00005021595	UPF2	99	94.749	Maylandia_zebra
ENSMALG00000002663	UPF2	99	83.569	ENSMGAG00000004573	UPF2	99	83.281	Meleagris_gallopavo
ENSMALG00000002663	UPF2	100	80.266	ENSMAUG00000016512	Upf2	99	79.984	Mesocricetus_auratus
ENSMALG00000002663	UPF2	100	79.952	ENSMICG00000001716	UPF2	100	81.171	Microcebus_murinus
ENSMALG00000002663	UPF2	100	81.505	ENSMOCG00000008263	Upf2	99	81.142	Microtus_ochrogaster
ENSMALG00000002663	UPF2	100	92.516	ENSMMOG00000006528	UPF2	100	91.799	Mola_mola
ENSMALG00000002663	UPF2	100	80.893	ENSMODG00000016794	UPF2	99	82.565	Monodelphis_domestica
ENSMALG00000002663	UPF2	100	82.224	MGP_CAROLIEiJ_G0023157	Upf2	99	84.233	Mus_caroli
ENSMALG00000002663	UPF2	100	82.459	ENSMUSG00000043241	Upf2	99	82.174	Mus_musculus
ENSMALG00000002663	UPF2	100	82.537	MGP_PahariEiJ_G0019217	Upf2	99	82.732	Mus_pahari
ENSMALG00000002663	UPF2	100	82.694	MGP_SPRETEiJ_G0024075	Upf2	99	82.408	Mus_spretus
ENSMALG00000002663	UPF2	100	82.694	ENSMPUG00000001064	UPF2	99	82.799	Mustela_putorius_furo
ENSMALG00000002663	UPF2	100	81.939	ENSMLUG00000000228	UPF2	100	82.151	Myotis_lucifugus
ENSMALG00000002663	UPF2	100	94.828	ENSNBRG00000013629	UPF2	99	94.828	Neolamprologus_brichardi
ENSMALG00000002663	UPF2	100	82.081	ENSNLEG00000012058	UPF2	99	82.109	Nomascus_leucogenys
ENSMALG00000002663	UPF2	72	93.662	ENSOPRG00000006801	-	73	93.662	Ochotona_princeps
ENSMALG00000002663	UPF2	100	81.299	ENSODEG00000001290	UPF2	99	81.299	Octodon_degus
ENSMALG00000002663	UPF2	100	93.809	ENSONIG00000017991	UPF2	99	94.514	Oreochromis_niloticus
ENSMALG00000002663	UPF2	100	81.357	ENSOCUG00000006230	UPF2	100	81.153	Oryctolagus_cuniculus
ENSMALG00000002663	UPF2	100	90.824	ENSORLG00000017189	UPF2	99	91.059	Oryzias_latipes
ENSMALG00000002663	UPF2	100	90.902	ENSORLG00020005969	UPF2	99	91.137	Oryzias_latipes_hni
ENSMALG00000002663	UPF2	100	90.902	ENSORLG00015005713	UPF2	99	91.137	Oryzias_latipes_hsok
ENSMALG00000002663	UPF2	100	87.834	ENSOMEG00000023420	UPF2	98	87.912	Oryzias_melastigma
ENSMALG00000002663	UPF2	100	82.459	ENSOGAG00000005796	UPF2	99	82.330	Otolemur_garnettii
ENSMALG00000002663	UPF2	100	82.486	ENSOARG00000014587	UPF2	99	82.592	Ovis_aries
ENSMALG00000002663	UPF2	100	79.560	ENSPPAG00000037953	UPF2	100	79.219	Pan_paniscus
ENSMALG00000002663	UPF2	100	82.616	ENSPPRG00000000690	UPF2	99	82.486	Panthera_pardus
ENSMALG00000002663	UPF2	100	82.616	ENSPTIG00000008867	UPF2	99	82.486	Panthera_tigris_altaica
ENSMALG00000002663	UPF2	100	82.003	ENSPTRG00000002291	UPF2	99	82.031	Pan_troglodytes
ENSMALG00000002663	UPF2	100	82.160	ENSPANG00000023399	UPF2	99	82.188	Papio_anubis
ENSMALG00000002663	UPF2	100	86.573	ENSPKIG00000025502	UPF2	99	86.552	Paramormyrops_kingsleyae
ENSMALG00000002663	UPF2	60	81.686	ENSPSIG00000015158	UPF2	95	79.051	Pelodiscus_sinensis
ENSMALG00000002663	UPF2	100	89.582	ENSPMGG00000005259	UPF2	100	90.134	Periophthalmus_magnuspinnatus
ENSMALG00000002663	UPF2	93	76.369	ENSPEMG00000015731	Upf2	99	76.369	Peromyscus_maniculatus_bairdii
ENSMALG00000002663	UPF2	100	82.799	ENSPCIG00000006656	UPF2	100	82.799	Phascolarctos_cinereus
ENSMALG00000002663	UPF2	100	92.386	ENSPFOG00000017118	UPF2	99	92.308	Poecilia_formosa
ENSMALG00000002663	UPF2	100	92.465	ENSPLAG00000005094	UPF2	99	92.386	Poecilia_latipinna
ENSMALG00000002663	UPF2	100	92.308	ENSPMEG00000017009	UPF2	99	92.229	Poecilia_mexicana
ENSMALG00000002663	UPF2	100	92.186	ENSPREG00000021880	UPF2	100	91.949	Poecilia_reticulata
ENSMALG00000002663	UPF2	65	84.368	ENSPPYG00000002089	-	99	84.167	Pongo_abelii
ENSMALG00000002663	UPF2	100	70.055	ENSPCAG00000000684	UPF2	99	70.367	Procavia_capensis
ENSMALG00000002663	UPF2	100	80.349	ENSPCOG00000021656	UPF2	100	79.984	Propithecus_coquereli
ENSMALG00000002663	UPF2	100	75.743	ENSPVAG00000017286	UPF2	99	75.781	Pteropus_vampyrus
ENSMALG00000002663	UPF2	100	91.536	ENSPNYG00000017096	UPF2	100	92.241	Pundamilia_nyererei
ENSMALG00000002663	UPF2	100	87.736	ENSPNAG00000009357	UPF2	100	87.814	Pygocentrus_nattereri
ENSMALG00000002663	UPF2	100	78.705	ENSRNOG00000023593	Upf2	98	94.318	Rattus_norvegicus
ENSMALG00000002663	UPF2	100	80.971	ENSRBIG00000037780	UPF2	100	80.923	Rhinopithecus_bieti
ENSMALG00000002663	UPF2	100	81.925	ENSRROG00000043547	UPF2	99	81.875	Rhinopithecus_roxellana
ENSMALG00000002663	UPF2	100	81.441	ENSSBOG00000020012	UPF2	99	81.001	Saimiri_boliviensis_boliviensis
ENSMALG00000002663	UPF2	100	85.547	ENSSFOG00015023788	upf2	100	85.121	Scleropages_formosus
ENSMALG00000002663	UPF2	90	89.931	ENSSMAG00000007637	UPF2	100	89.837	Scophthalmus_maximus
ENSMALG00000002663	UPF2	100	95.133	ENSSDUG00000017244	UPF2	100	94.586	Seriola_dumerili
ENSMALG00000002663	UPF2	100	94.586	ENSSLDG00000016866	UPF2	100	94.188	Seriola_lalandi_dorsalis
ENSMALG00000002663	UPF2	100	79.264	ENSSARG00000008615	UPF2	99	81.216	Sorex_araneus
ENSMALG00000002663	UPF2	100	80.297	ENSSPUG00000014544	UPF2	99	79.672	Sphenodon_punctatus
ENSMALG00000002663	UPF2	68	84.138	ENSSSCG00000011117	-	99	84.289	Sus_scrofa
ENSMALG00000002663	UPF2	99	83.386	ENSTGUG00000002163	-	100	83.412	Taeniopygia_guttata
ENSMALG00000002663	UPF2	100	91.223	ENSTRUG00000007519	UPF2	99	91.850	Takifugu_rubripes
ENSMALG00000002663	UPF2	100	87.793	ENSTNIG00000004453	UPF2	99	87.872	Tetraodon_nigroviridis
ENSMALG00000002663	UPF2	93	74.074	ENSTBEG00000012679	UPF2	93	74.706	Tupaia_belangeri
ENSMALG00000002663	UPF2	100	81.426	ENSTTRG00000016388	UPF2	99	81.455	Tursiops_truncatus
ENSMALG00000002663	UPF2	88	94.382	ENSUAMG00000023560	UPF2	98	94.382	Ursus_americanus
ENSMALG00000002663	UPF2	100	82.616	ENSUMAG00000012953	UPF2	95	82.486	Ursus_maritimus
ENSMALG00000002663	UPF2	84	96.774	ENSVPAG00000006763	UPF2	85	96.774	Vicugna_pacos
ENSMALG00000002663	UPF2	100	82.850	ENSVVUG00000006166	UPF2	99	82.877	Vulpes_vulpes
ENSMALG00000002663	UPF2	100	78.164	ENSXETG00000033103	UPF2	91	83.348	Xenopus_tropicalis
ENSMALG00000002663	UPF2	100	92.229	ENSXCOG00000011604	UPF2	100	92.151	Xiphophorus_couchianus
ENSMALG00000002663	UPF2	100	92.386	ENSXMAG00000017209	UPF2	99	92.308	Xiphophorus_maculatus