EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000002831 (Gene tree)
Gene ID: 109966483
Gene Symbol: chd5
Alias: -
Full Name: chromodomain helicase DNA binding protein 5
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 30592 bases
Position: chrKV884689.1:6258067-6288658
Accession: 109966483
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000003969	ResIII	PF04851.15	2.1e-08	1	1
ENSMALP00000004021	ResIII	PF04851.15	2.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000004123	-	5568	-	ENSMALP00000004021	1855 (aa)	-	-
ENSMALT00000004069	-	6506	XM_020611740	ENSMALP00000003969	1925 (aa)	XP_020467396	-

Gene Model

Click here to download ENSMALG00000002831's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000002831's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000002831	chd5	91	79.821	ENSMALG00000005766	chd4a	93	67.129
ENSMALG00000002831	chd5	94	68.403	ENSMALG00000022494	-	95	68.290

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000002831	chd5	97	76.863	ENSG00000116254	CHD5	96	80.892	Homo_sapiens
ENSMALG00000002831	chd5	96	76.677	ENSAMEG00000009880	CHD5	95	77.393	Ailuropoda_melanoleuca
ENSMALG00000002831	chd5	99	92.295	ENSACIG00000012582	chd5	99	93.923	Amphilophus_citrinellus
ENSMALG00000002831	chd5	99	95.211	ENSAOCG00000020356	chd5	96	95.263	Amphiprion_ocellaris
ENSMALG00000002831	chd5	94	73.041	ENSAPLG00000015475	CHD5	95	74.601	Anas_platyrhynchos
ENSMALG00000002831	chd5	96	76.786	ENSACAG00000002441	CHD5	95	74.708	Anolis_carolinensis
ENSMALG00000002831	chd5	89	76.914	ENSANAG00000001078	CHD5	91	78.042	Aotus_nancymaae
ENSMALG00000002831	chd5	98	85.159	ENSACLG00000003012	chd5	99	85.806	Astatotilapia_calliptera
ENSMALG00000002831	chd5	91	87.586	ENSAMXG00000008921	chd5	99	88.276	Astyanax_mexicanus
ENSMALG00000002831	chd5	95	77.032	ENSBTAG00000040477	CHD5	99	77.856	Bos_taurus
ENSMALG00000002831	chd5	96	76.936	ENSCJAG00000000101	CHD5	94	77.922	Callithrix_jacchus
ENSMALG00000002831	chd5	95	77.578	ENSCAFG00000019545	CHD5	99	78.026	Canis_familiaris
ENSMALG00000002831	chd5	96	78.185	ENSCAFG00020008689	CHD5	91	79.203	Canis_lupus_dingo
ENSMALG00000002831	chd5	99	76.505	ENSCHIG00000015027	CHD5	92	77.299	Capra_hircus
ENSMALG00000002831	chd5	96	76.157	ENSTSYG00000033991	CHD5	94	76.563	Carlito_syrichta
ENSMALG00000002831	chd5	96	78.325	ENSCAPG00000009294	CHD5	95	79.235	Cavia_aperea
ENSMALG00000002831	chd5	96	78.325	ENSCPOG00000025080	CHD5	95	79.235	Cavia_porcellus
ENSMALG00000002831	chd5	96	77.303	ENSCCAG00000024756	CHD5	94	77.862	Cebus_capucinus
ENSMALG00000002831	chd5	96	77.061	ENSCATG00000043011	CHD5	94	77.988	Cercocebus_atys
ENSMALG00000002831	chd5	96	78.010	ENSCLAG00000010589	CHD5	95	79.235	Chinchilla_lanigera
ENSMALG00000002831	chd5	96	77.002	ENSCSAG00000000733	CHD5	94	77.903	Chlorocebus_sabaeus
ENSMALG00000002831	chd5	96	76.765	ENSCPBG00000019363	CHD5	100	77.016	Chrysemys_picta_bellii
ENSMALG00000002831	chd5	96	77.231	ENSCANG00000032302	CHD5	94	77.986	Colobus_angolensis_palliatus
ENSMALG00000002831	chd5	55	80.957	ENSCGRG00001011042	Chd5	98	82.112	Cricetulus_griseus_chok1gshd
ENSMALG00000002831	chd5	99	77.382	ENSCGRG00000011341	Chd5	97	78.602	Cricetulus_griseus_crigri
ENSMALG00000002831	chd5	98	85.422	ENSDARG00000105083	chd5	100	87.563	Danio_rerio
ENSMALG00000002831	chd5	94	66.288	ENSDARG00000025789	chd4b	93	68.120	Danio_rerio
ENSMALG00000002831	chd5	90	80.560	ENSDNOG00000046342	CHD5	89	80.717	Dasypus_novemcinctus
ENSMALG00000002831	chd5	96	77.566	ENSDORG00000005923	Chd5	95	79.094	Dipodomys_ordii
ENSMALG00000002831	chd5	86	90.826	ENSEASG00005021464	CHD5	95	88.208	Equus_asinus_asinus
ENSMALG00000002831	chd5	87	90.090	ENSECAG00000025043	CHD5	96	86.307	Equus_caballus
ENSMALG00000002831	chd5	69	87.324	ENSEEUG00000002772	CHD5	70	87.324	Erinaceus_europaeus
ENSMALG00000002831	chd5	93	89.062	ENSELUG00000010742	chd5	96	89.062	Esox_lucius
ENSMALG00000002831	chd5	96	77.940	ENSFCAG00000006319	CHD5	94	78.277	Felis_catus
ENSMALG00000002831	chd5	96	76.534	ENSFALG00000009740	CHD5	94	77.236	Ficedula_albicollis
ENSMALG00000002831	chd5	97	76.948	ENSFDAG00000012881	CHD5	92	78.321	Fukomys_damarensis
ENSMALG00000002831	chd5	96	77.149	ENSGALG00000000747	CHD5	94	77.772	Gallus_gallus
ENSMALG00000002831	chd5	58	92.990	ENSGACG00000004389	chd5	97	93.268	Gasterosteus_aculeatus
ENSMALG00000002831	chd5	85	91.549	ENSGAGG00000001590	CHD5	97	89.756	Gopherus_agassizii
ENSMALG00000002831	chd5	96	79.622	ENSGGOG00000000708	CHD5	95	78.204	Gorilla_gorilla
ENSMALG00000002831	chd5	98	86.383	ENSHBUG00000013453	chd5	99	86.652	Haplochromis_burtoni
ENSMALG00000002831	chd5	96	77.583	ENSHGLG00000018184	CHD5	97	77.521	Heterocephalus_glaber_female
ENSMALG00000002831	chd5	96	72.264	ENSHGLG00100013261	CHD5	94	71.737	Heterocephalus_glaber_male
ENSMALG00000002831	chd5	96	83.620	ENSIPUG00000005446	chd5	99	83.369	Ictalurus_punctatus
ENSMALG00000002831	chd5	99	77.345	ENSSTOG00000002778	CHD5	95	78.867	Ictidomys_tridecemlineatus
ENSMALG00000002831	chd5	99	77.447	ENSJJAG00000019072	Chd5	96	78.911	Jaculus_jaculus
ENSMALG00000002831	chd5	99	83.742	ENSLOCG00000004944	chd5	93	84.537	Lepisosteus_oculatus
ENSMALG00000002831	chd5	97	77.419	ENSLAFG00000006348	CHD5	100	77.597	Loxodonta_africana
ENSMALG00000002831	chd5	99	75.983	ENSMFAG00000033993	CHD5	99	77.880	Macaca_fascicularis
ENSMALG00000002831	chd5	97	78.090	ENSMMUG00000016838	CHD5	93	79.169	Macaca_mulatta
ENSMALG00000002831	chd5	97	76.811	ENSMNEG00000040044	CHD5	94	77.879	Macaca_nemestrina
ENSMALG00000002831	chd5	97	73.871	ENSMLEG00000039166	CHD5	95	74.828	Mandrillus_leucophaeus
ENSMALG00000002831	chd5	98	83.396	ENSMZEG00005000841	chd5	95	92.683	Maylandia_zebra
ENSMALG00000002831	chd5	96	76.977	ENSMGAG00000001055	CHD5	94	77.573	Meleagris_gallopavo
ENSMALG00000002831	chd5	94	81.207	ENSMICG00000017862	CHD5	96	78.733	Microcebus_murinus
ENSMALG00000002831	chd5	99	77.370	ENSMOCG00000011049	Chd5	95	78.419	Microtus_ochrogaster
ENSMALG00000002831	chd5	74	87.747	ENSMODG00000006294	CHD5	73	81.787	Monodelphis_domestica
ENSMALG00000002831	chd5	99	76.681	MGP_CAROLIEiJ_G0026857	Chd5	96	77.667	Mus_caroli
ENSMALG00000002831	chd5	96	78.218	ENSMUSG00000005045	Chd5	95	78.922	Mus_musculus
ENSMALG00000002831	chd5	99	77.147	MGP_PahariEiJ_G0029205	Chd5	95	78.590	Mus_pahari
ENSMALG00000002831	chd5	99	77.237	MGP_SPRETEiJ_G0027850	Chd5	95	78.995	Mus_spretus
ENSMALG00000002831	chd5	96	75.643	ENSMPUG00000007122	CHD5	94	76.557	Mustela_putorius_furo
ENSMALG00000002831	chd5	99	76.168	ENSNGAG00000019812	Chd5	93	77.101	Nannospalax_galili
ENSMALG00000002831	chd5	97	75.208	ENSNLEG00000010320	CHD5	95	75.844	Nomascus_leucogenys
ENSMALG00000002831	chd5	85	74.422	ENSOPRG00000004304	CHD5	80	74.738	Ochotona_princeps
ENSMALG00000002831	chd5	96	78.156	ENSODEG00000010262	CHD5	95	79.137	Octodon_degus
ENSMALG00000002831	chd5	99	91.828	ENSONIG00000000619	chd5	99	91.879	Oreochromis_niloticus
ENSMALG00000002831	chd5	96	65.656	ENSOANG00000001819	CHD5	98	65.377	Ornithorhynchus_anatinus
ENSMALG00000002831	chd5	97	76.420	ENSOGAG00000005703	CHD5	94	77.555	Otolemur_garnettii
ENSMALG00000002831	chd5	94	76.217	ENSOARG00000013425	CHD5	93	77.263	Ovis_aries
ENSMALG00000002831	chd5	96	77.015	ENSPPAG00000034048	CHD5	95	78.162	Pan_paniscus
ENSMALG00000002831	chd5	96	77.453	ENSPPRG00000009453	CHD5	93	77.790	Panthera_pardus
ENSMALG00000002831	chd5	96	72.713	ENSPTIG00000013926	CHD5	95	73.065	Panthera_tigris_altaica
ENSMALG00000002831	chd5	97	76.771	ENSPTRG00000000075	CHD5	94	78.108	Pan_troglodytes
ENSMALG00000002831	chd5	97	76.863	ENSPANG00000006765	CHD5	94	77.879	Papio_anubis
ENSMALG00000002831	chd5	94	84.725	ENSPKIG00000004282	chd5	91	89.113	Paramormyrops_kingsleyae
ENSMALG00000002831	chd5	96	71.328	ENSPSIG00000006414	CHD5	97	72.596	Pelodiscus_sinensis
ENSMALG00000002831	chd5	67	79.781	ENSPEMG00000014799	Chd5	96	82.772	Peromyscus_maniculatus_bairdii
ENSMALG00000002831	chd5	96	78.312	ENSPCIG00000028310	CHD5	92	78.644	Phascolarctos_cinereus
ENSMALG00000002831	chd5	98	88.716	ENSPLAG00000005343	chd5	99	88.783	Poecilia_latipinna
ENSMALG00000002831	chd5	91	87.550	ENSPPYG00000001952	CHD5	95	81.818	Pongo_abelii
ENSMALG00000002831	chd5	96	77.446	ENSPCOG00000022930	CHD5	94	77.944	Propithecus_coquereli
ENSMALG00000002831	chd5	98	90.330	ENSPNYG00000003183	chd5	99	91.965	Pundamilia_nyererei
ENSMALG00000002831	chd5	99	76.582	ENSRNOG00000011268	Chd5	96	77.401	Rattus_norvegicus
ENSMALG00000002831	chd5	89	87.952	ENSRBIG00000032140	CHD5	99	75.414	Rhinopithecus_bieti
ENSMALG00000002831	chd5	96	76.894	ENSRROG00000041146	CHD5	94	77.808	Rhinopithecus_roxellana
ENSMALG00000002831	chd5	96	74.849	ENSSBOG00000001955	CHD5	99	79.312	Saimiri_boliviensis_boliviensis
ENSMALG00000002831	chd5	96	71.900	ENSSHAG00000018641	CHD5	97	72.147	Sarcophilus_harrisii
ENSMALG00000002831	chd5	99	85.751	ENSSFOG00015006296	chd5	93	87.105	Scleropages_formosus
ENSMALG00000002831	chd5	99	94.654	ENSSDUG00000017526	chd5	99	94.546	Seriola_dumerili
ENSMALG00000002831	chd5	99	72.464	ENSSPUG00000010622	CHD5	94	73.466	Sphenodon_punctatus
ENSMALG00000002831	chd5	95	77.960	ENSSSCG00000003366	CHD5	99	78.384	Sus_scrofa
ENSMALG00000002831	chd5	93	73.565	ENSTGUG00000002634	-	97	75.541	Taeniopygia_guttata
ENSMALG00000002831	chd5	53	91.321	ENSTNIG00000004346	chd5	99	91.313	Tetraodon_nigroviridis
ENSMALG00000002831	chd5	96	77.626	ENSTTRG00000010468	CHD5	94	78.062	Tursiops_truncatus
ENSMALG00000002831	chd5	90	87.442	ENSUAMG00000024509	CHD5	92	87.442	Ursus_americanus
ENSMALG00000002831	chd5	99	72.219	ENSUMAG00000024173	CHD5	95	74.973	Ursus_maritimus
ENSMALG00000002831	chd5	83	92.000	ENSVVUG00000026480	CHD5	89	92.000	Vulpes_vulpes
ENSMALG00000002831	chd5	99	72.655	ENSXETG00000002904	chd5	97	73.970	Xenopus_tropicalis
ENSMALG00000002831	chd5	60	92.098	ENSXCOG00000014202	chd5	98	92.112	Xiphophorus_couchianus