EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000002917 (Gene tree)
Gene ID: 109972309
Gene Symbol: mtrex
Alias: julie|mtrex|skiv2l2|wu:fd11a05|zgc:63838
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 21466 bases
Position: chrKV884941.1:416634-438099
Accession: 109972309
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000004251	ResIII	PF04851.15	2.3e-05	1	1
ENSMALP00000004251	rRNA_proc-arch	PF13234.6	1.1e-84	1	1
ENSMALP00000004338	rRNA_proc-arch	PF13234.6	8.6e-65	1	1
ENSMALP00000004338	DEAD	PF00270.29	1.2e-16	1	1
ENSMALP00000004251	DEAD	PF00270.29	3.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000004355	-	2934	XM_020621072	ENSMALP00000004251	977 (aa)	XP_020476728	-
ENSMALT00000004443	-	2862	-	ENSMALP00000004338	953 (aa)	-	-

Gene Model

Click here to download ENSMALG00000002917's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000002917's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000002917	mtrex	87	49.791	ENSMALG00000010535	skiv2l	72	49.791

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000002917	mtrex	99	82.497	ENSG00000039123	MTREX	92	82.497	Homo_sapiens
ENSMALG00000002917	mtrex	99	90.714	ENSAPOG00000007814	mtrex	93	90.714	Acanthochromis_polyacanthus
ENSMALG00000002917	mtrex	99	82.413	ENSAMEG00000013856	MTREX	92	82.413	Ailuropoda_melanoleuca
ENSMALG00000002917	mtrex	100	87.957	ENSACIG00000015117	mtrex	100	87.858	Amphilophus_citrinellus
ENSMALG00000002917	mtrex	99	90.714	ENSAOCG00000011884	mtrex	93	90.714	Amphiprion_ocellaris
ENSMALG00000002917	mtrex	99	90.612	ENSAPEG00000019384	mtrex	93	90.612	Amphiprion_percula
ENSMALG00000002917	mtrex	99	90.194	ENSATEG00000015117	mtrex	100	83.317	Anabas_testudineus
ENSMALG00000002917	mtrex	99	81.576	ENSAPLG00000009694	MTREX	96	81.576	Anas_platyrhynchos
ENSMALG00000002917	mtrex	99	82.161	ENSACAG00000015200	MTREX	89	82.161	Anolis_carolinensis
ENSMALG00000002917	mtrex	99	82.600	ENSANAG00000023095	MTREX	94	82.600	Aotus_nancymaae
ENSMALG00000002917	mtrex	98	90.041	ENSACLG00000001921	mtrex	100	82.177	Astatotilapia_calliptera
ENSMALG00000002917	mtrex	93	84.273	ENSAMXG00000018751	mtrex	96	79.858	Astyanax_mexicanus
ENSMALG00000002917	mtrex	99	82.600	ENSBTAG00000010518	MTREX	92	82.600	Bos_taurus
ENSMALG00000002917	mtrex	97	51.763	WBGene00012342	mtr-4	91	51.660	Caenorhabditis_elegans
ENSMALG00000002917	mtrex	99	82.600	ENSCJAG00000001773	MTREX	92	82.600	Callithrix_jacchus
ENSMALG00000002917	mtrex	99	82.600	ENSCAFG00000006818	MTREX	92	82.600	Canis_familiaris
ENSMALG00000002917	mtrex	99	82.600	ENSCAFG00020024352	MTREX	92	82.600	Canis_lupus_dingo
ENSMALG00000002917	mtrex	99	82.497	ENSCHIG00000024413	MTREX	92	82.497	Capra_hircus
ENSMALG00000002917	mtrex	87	88.742	ENSTSYG00000007389	MTREX	88	88.079	Carlito_syrichta
ENSMALG00000002917	mtrex	89	75.751	ENSCAPG00000008696	MTREX	91	75.751	Cavia_aperea
ENSMALG00000002917	mtrex	99	82.497	ENSCPOG00000009797	MTREX	92	82.497	Cavia_porcellus
ENSMALG00000002917	mtrex	99	82.600	ENSCCAG00000014177	MTREX	92	82.600	Cebus_capucinus
ENSMALG00000002917	mtrex	99	82.497	ENSCATG00000042153	MTREX	92	82.497	Cercocebus_atys
ENSMALG00000002917	mtrex	99	82.497	ENSCLAG00000006622	MTREX	92	82.497	Chinchilla_lanigera
ENSMALG00000002917	mtrex	99	78.673	ENSCSAG00000016445	MTREX	92	78.673	Chlorocebus_sabaeus
ENSMALG00000002917	mtrex	61	97.222	ENSCHOG00000010936	-	57	97.222	Choloepus_hoffmanni
ENSMALG00000002917	mtrex	99	82.702	ENSCPBG00000026551	MTREX	86	82.702	Chrysemys_picta_bellii
ENSMALG00000002917	mtrex	98	65.816	ENSCING00000003239	-	93	65.816	Ciona_intestinalis
ENSMALG00000002917	mtrex	98	65.373	ENSCSAVG00000009304	-	100	66.105	Ciona_savignyi
ENSMALG00000002917	mtrex	99	82.497	ENSCANG00000035770	MTREX	92	82.497	Colobus_angolensis_palliatus
ENSMALG00000002917	mtrex	99	82.497	ENSCGRG00001024680	Mtrex	92	82.497	Cricetulus_griseus_chok1gshd
ENSMALG00000002917	mtrex	99	82.497	ENSCGRG00000000307	Mtrex	92	82.497	Cricetulus_griseus_crigri
ENSMALG00000002917	mtrex	98	89.209	ENSCSEG00000018621	mtrex	100	83.588	Cynoglossus_semilaevis
ENSMALG00000002917	mtrex	99	90.000	ENSCVAG00000004556	mtrex	93	90.000	Cyprinodon_variegatus
ENSMALG00000002917	mtrex	98	84.378	ENSDARG00000013457	mtrex	92	84.378	Danio_rerio
ENSMALG00000002917	mtrex	99	82.702	ENSDNOG00000015375	MTREX	100	73.830	Dasypus_novemcinctus
ENSMALG00000002917	mtrex	99	82.600	ENSDORG00000006782	Mtrex	92	82.600	Dipodomys_ordii
ENSMALG00000002917	mtrex	97	62.967	FBgn0001986	Mtr4	97	55.707	Drosophila_melanogaster
ENSMALG00000002917	mtrex	90	66.512	ENSETEG00000000727	MTREX	74	92.157	Echinops_telfairi
ENSMALG00000002917	mtrex	99	71.951	ENSEBUG00000012869	mtrex	93	71.951	Eptatretus_burgeri
ENSMALG00000002917	mtrex	99	82.395	ENSEASG00005013270	MTREX	92	82.395	Equus_asinus_asinus
ENSMALG00000002917	mtrex	99	82.497	ENSECAG00000023723	MTREX	100	88.837	Equus_caballus
ENSMALG00000002917	mtrex	90	85.406	ENSEEUG00000000527	MTREX	87	85.131	Erinaceus_europaeus
ENSMALG00000002917	mtrex	98	85.773	ENSELUG00000004898	mtrex	100	85.773	Esox_lucius
ENSMALG00000002917	mtrex	99	82.600	ENSFCAG00000010575	MTREX	92	82.600	Felis_catus
ENSMALG00000002917	mtrex	99	81.269	ENSFALG00000010850	MTREX	100	73.333	Ficedula_albicollis
ENSMALG00000002917	mtrex	99	82.172	ENSFDAG00000011199	MTREX	92	82.172	Fukomys_damarensis
ENSMALG00000002917	mtrex	99	89.184	ENSFHEG00000023014	mtrex	93	89.609	Fundulus_heteroclitus
ENSMALG00000002917	mtrex	99	84.647	ENSGMOG00000014702	mtrex	93	84.545	Gadus_morhua
ENSMALG00000002917	mtrex	99	81.679	ENSGALG00000014709	MTREX	80	81.679	Gallus_gallus
ENSMALG00000002917	mtrex	99	89.184	ENSGAFG00000012425	mtrex	100	88.060	Gambusia_affinis
ENSMALG00000002917	mtrex	100	83.384	ENSGACG00000016260	mtrex	99	83.384	Gasterosteus_aculeatus
ENSMALG00000002917	mtrex	99	82.600	ENSGAGG00000020036	MTREX	92	82.600	Gopherus_agassizii
ENSMALG00000002917	mtrex	99	82.497	ENSGGOG00000001867	MTREX	92	82.497	Gorilla_gorilla
ENSMALG00000002917	mtrex	98	90.041	ENSHBUG00000006229	mtrex	100	82.177	Haplochromis_burtoni
ENSMALG00000002917	mtrex	99	82.395	ENSHGLG00000019445	SKIV2L2	92	82.395	Heterocephalus_glaber_female
ENSMALG00000002917	mtrex	99	82.395	ENSHGLG00100011833	SKIV2L2	92	82.395	Heterocephalus_glaber_male
ENSMALG00000002917	mtrex	98	85.586	ENSHCOG00000019995	mtrex	100	85.085	Hippocampus_comes
ENSMALG00000002917	mtrex	98	83.984	ENSIPUG00000024348	skiv2l2	92	83.984	Ictalurus_punctatus
ENSMALG00000002917	mtrex	99	82.395	ENSSTOG00000010802	MTREX	92	82.395	Ictidomys_tridecemlineatus
ENSMALG00000002917	mtrex	98	78.904	ENSJJAG00000020975	Mtrex	100	71.984	Jaculus_jaculus
ENSMALG00000002917	mtrex	99	89.867	ENSKMAG00000012642	mtrex	100	86.261	Kryptolebias_marmoratus
ENSMALG00000002917	mtrex	99	89.898	ENSLBEG00000019367	mtrex	99	88.604	Labrus_bergylta
ENSMALG00000002917	mtrex	98	83.368	ENSLACG00000009075	MTREX	92	83.368	Latimeria_chalumnae
ENSMALG00000002917	mtrex	98	84.221	ENSLOCG00000010186	mtrex	100	77.483	Lepisosteus_oculatus
ENSMALG00000002917	mtrex	99	80.246	ENSLAFG00000010497	MTREX	92	80.246	Loxodonta_africana
ENSMALG00000002917	mtrex	99	82.497	ENSMFAG00000031610	MTREX	92	82.497	Macaca_fascicularis
ENSMALG00000002917	mtrex	99	82.395	ENSMMUG00000010379	MTREX	100	74.163	Macaca_mulatta
ENSMALG00000002917	mtrex	99	82.497	ENSMNEG00000032746	MTREX	92	82.497	Macaca_nemestrina
ENSMALG00000002917	mtrex	99	82.497	ENSMLEG00000041051	MTREX	92	82.497	Mandrillus_leucophaeus
ENSMALG00000002917	mtrex	99	91.496	ENSMAMG00000016753	mtrex	100	89.515	Mastacembelus_armatus
ENSMALG00000002917	mtrex	98	90.041	ENSMZEG00005000414	mtrex	100	82.177	Maylandia_zebra
ENSMALG00000002917	mtrex	99	58.673	ENSMGAG00000003980	MTREX	97	58.673	Meleagris_gallopavo
ENSMALG00000002917	mtrex	99	82.263	ENSMAUG00000010727	Mtrex	92	82.263	Mesocricetus_auratus
ENSMALG00000002917	mtrex	99	82.702	ENSMICG00000012779	MTREX	92	82.702	Microcebus_murinus
ENSMALG00000002917	mtrex	99	82.395	ENSMOCG00000019886	Mtrex	92	82.395	Microtus_ochrogaster
ENSMALG00000002917	mtrex	100	87.512	ENSMMOG00000002476	mtrex	100	87.512	Mola_mola
ENSMALG00000002917	mtrex	99	82.190	ENSMODG00000019494	MTREX	92	82.190	Monodelphis_domestica
ENSMALG00000002917	mtrex	99	82.088	MGP_CAROLIEiJ_G0018896	Mtrex	92	82.088	Mus_caroli
ENSMALG00000002917	mtrex	99	81.986	ENSMUSG00000016018	Mtrex	92	81.986	Mus_musculus
ENSMALG00000002917	mtrex	99	82.088	MGP_PahariEiJ_G0015967	Mtrex	92	82.088	Mus_pahari
ENSMALG00000002917	mtrex	99	81.986	MGP_SPRETEiJ_G0019775	Mtrex	92	81.986	Mus_spretus
ENSMALG00000002917	mtrex	99	82.600	ENSMPUG00000007619	MTREX	92	82.600	Mustela_putorius_furo
ENSMALG00000002917	mtrex	99	82.143	ENSMLUG00000001152	MTREX	92	82.143	Myotis_lucifugus
ENSMALG00000002917	mtrex	99	82.497	ENSNGAG00000011938	Mtrex	92	82.497	Nannospalax_galili
ENSMALG00000002917	mtrex	98	90.144	ENSNBRG00000011293	mtrex	100	82.274	Neolamprologus_brichardi
ENSMALG00000002917	mtrex	99	78.528	ENSNLEG00000001494	MTREX	100	70.741	Nomascus_leucogenys
ENSMALG00000002917	mtrex	78	92.157	ENSMEUG00000006496	-	76	92.157	Notamacropus_eugenii
ENSMALG00000002917	mtrex	99	69.160	ENSOPRG00000008009	MTREX	100	66.347	Ochotona_princeps
ENSMALG00000002917	mtrex	99	81.883	ENSODEG00000017234	MTREX	92	81.883	Octodon_degus
ENSMALG00000002917	mtrex	98	89.733	ENSONIG00000007587	mtrex	100	82.177	Oreochromis_niloticus
ENSMALG00000002917	mtrex	54	74.206	ENSOANG00000004885	-	99	74.206	Ornithorhynchus_anatinus
ENSMALG00000002917	mtrex	99	82.600	ENSOCUG00000004463	MTREX	92	82.600	Oryctolagus_cuniculus
ENSMALG00000002917	mtrex	99	89.275	ENSORLG00000005443	mtrex	93	89.275	Oryzias_latipes
ENSMALG00000002917	mtrex	99	89.070	ENSORLG00020006329	mtrex	99	86.468	Oryzias_latipes_hni
ENSMALG00000002917	mtrex	99	89.070	ENSORLG00015012924	mtrex	99	86.468	Oryzias_latipes_hsok
ENSMALG00000002917	mtrex	99	88.697	ENSOMEG00000008825	mtrex	93	88.697	Oryzias_melastigma
ENSMALG00000002917	mtrex	99	82.702	ENSOGAG00000002886	MTREX	92	82.702	Otolemur_garnettii
ENSMALG00000002917	mtrex	99	82.245	ENSOARG00000007764	MTREX	92	82.245	Ovis_aries
ENSMALG00000002917	mtrex	99	82.497	ENSPPAG00000039291	MTREX	92	82.497	Pan_paniscus
ENSMALG00000002917	mtrex	99	82.600	ENSPPRG00000019701	MTREX	92	82.600	Panthera_pardus
ENSMALG00000002917	mtrex	99	81.064	ENSPTIG00000009313	MTREX	100	72.579	Panthera_tigris_altaica
ENSMALG00000002917	mtrex	99	82.497	ENSPTRG00000016878	MTREX	92	82.497	Pan_troglodytes
ENSMALG00000002917	mtrex	99	82.395	ENSPANG00000009697	MTREX	92	82.395	Papio_anubis
ENSMALG00000002917	mtrex	99	83.878	ENSPKIG00000020833	mtrex	100	81.231	Paramormyrops_kingsleyae
ENSMALG00000002917	mtrex	99	82.600	ENSPSIG00000012150	MTREX	100	74.758	Pelodiscus_sinensis
ENSMALG00000002917	mtrex	100	87.549	ENSPMGG00000002582	mtrex	100	87.549	Periophthalmus_magnuspinnatus
ENSMALG00000002917	mtrex	94	64.865	ENSPMAG00000009668	mtrex	100	58.265	Petromyzon_marinus
ENSMALG00000002917	mtrex	98	82.474	ENSPCIG00000024730	MTREX	100	82.474	Phascolarctos_cinereus
ENSMALG00000002917	mtrex	81	88.433	ENSPFOG00000003141	mtrex	99	88.433	Poecilia_formosa
ENSMALG00000002917	mtrex	99	89.308	ENSPLAG00000021311	mtrex	100	84.155	Poecilia_latipinna
ENSMALG00000002917	mtrex	98	88.660	ENSPMEG00000010597	mtrex	99	88.660	Poecilia_mexicana
ENSMALG00000002917	mtrex	99	89.002	ENSPREG00000003089	mtrex	100	85.673	Poecilia_reticulata
ENSMALG00000002917	mtrex	97	82.292	ENSPPYG00000015469	MTREX	98	73.541	Pongo_abelii
ENSMALG00000002917	mtrex	93	73.488	ENSPCAG00000013120	MTREX	94	73.488	Procavia_capensis
ENSMALG00000002917	mtrex	98	76.497	ENSPCOG00000018092	MTREX	91	76.497	Propithecus_coquereli
ENSMALG00000002917	mtrex	99	82.497	ENSPVAG00000002445	MTREX	92	82.497	Pteropus_vampyrus
ENSMALG00000002917	mtrex	98	89.938	ENSPNYG00000006164	mtrex	100	82.081	Pundamilia_nyererei
ENSMALG00000002917	mtrex	98	85.113	ENSPNAG00000008794	mtrex	100	80.547	Pygocentrus_nattereri
ENSMALG00000002917	mtrex	98	81.276	ENSRNOG00000010125	Mtrex	89	81.276	Rattus_norvegicus
ENSMALG00000002917	mtrex	99	80.655	ENSRBIG00000034930	MTREX	100	72.302	Rhinopithecus_bieti
ENSMALG00000002917	mtrex	99	82.497	ENSRROG00000039895	MTREX	92	82.497	Rhinopithecus_roxellana
ENSMALG00000002917	mtrex	96	52.303	YJL050W	MTR4	89	52.049	Saccharomyces_cerevisiae
ENSMALG00000002917	mtrex	99	82.600	ENSSBOG00000026693	MTREX	93	82.600	Saimiri_boliviensis_boliviensis
ENSMALG00000002917	mtrex	99	82.293	ENSSHAG00000004600	MTREX	96	82.293	Sarcophilus_harrisii
ENSMALG00000002917	mtrex	98	84.908	ENSSFOG00015014355	skiv2l2	100	80.614	Scleropages_formosus
ENSMALG00000002917	mtrex	99	89.969	ENSSMAG00000007572	mtrex	93	89.969	Scophthalmus_maximus
ENSMALG00000002917	mtrex	99	90.918	ENSSDUG00000023789	mtrex	100	87.938	Seriola_dumerili
ENSMALG00000002917	mtrex	99	91.020	ENSSLDG00000006301	mtrex	100	88.627	Seriola_lalandi_dorsalis
ENSMALG00000002917	mtrex	98	82.444	ENSSARG00000008387	MTREX	91	82.444	Sorex_araneus
ENSMALG00000002917	mtrex	86	86.235	ENSSPUG00000007071	MTREX	87	86.235	Sphenodon_punctatus
ENSMALG00000002917	mtrex	100	85.217	ENSSPAG00000011319	mtrex	100	85.121	Stegastes_partitus
ENSMALG00000002917	mtrex	99	82.702	ENSSSCG00000016911	MTREX	92	82.702	Sus_scrofa
ENSMALG00000002917	mtrex	99	80.655	ENSTGUG00000002480	MTREX	100	72.973	Taeniopygia_guttata
ENSMALG00000002917	mtrex	99	88.187	ENSTRUG00000014571	mtrex	98	86.070	Takifugu_rubripes
ENSMALG00000002917	mtrex	94	70.784	ENSTBEG00000007769	MTREX	100	61.053	Tupaia_belangeri
ENSMALG00000002917	mtrex	99	82.497	ENSTTRG00000008678	MTREX	92	82.497	Tursiops_truncatus
ENSMALG00000002917	mtrex	99	82.497	ENSUAMG00000023061	MTREX	92	82.497	Ursus_americanus
ENSMALG00000002917	mtrex	99	81.818	ENSUMAG00000009373	MTREX	99	82.867	Ursus_maritimus
ENSMALG00000002917	mtrex	93	82.342	ENSVPAG00000011174	MTREX	86	81.970	Vicugna_pacos
ENSMALG00000002917	mtrex	99	82.702	ENSVVUG00000021337	MTREX	92	82.702	Vulpes_vulpes
ENSMALG00000002917	mtrex	99	82.449	ENSXETG00000032798	MTREX	100	75.579	Xenopus_tropicalis
ENSMALG00000002917	mtrex	99	89.490	ENSXMAG00000004799	mtrex	100	87.251	Xiphophorus_maculatus