EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000003045 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 11601 bases
Position: chrKV884714.1:1484011-1495611
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000004192	zf-C2H2	PF00096.26	4.8e-08	1	1
ENSMALP00000004179	zf-C2H2	PF00096.26	6.5e-06	1	1
ENSMALP00000004192	zf-met	PF12874.7	0.00015	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000004294	-	1143	-	ENSMALP00000004192	380 (aa)	-	-
ENSMALT00000004281	-	6051	-	ENSMALP00000004179	408 (aa)	-	-

Gene Model

Click here to download ENSMALG00000003045's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000003045's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000003045	-	82	72.121	ENSMALG00000021901	prdm12b	96	70.303
ENSMALG00000003045	-	51	37.647	ENSMALG00000013934	prdm5	53	37.647

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000003045	-	74	84.669	ENSGMOG00000002701	-	97	85.959	Gadus_morhua
ENSMALG00000003045	-	81	68.807	ENSMMOG00000000101	-	93	68.807	Mola_mola
ENSMALG00000003045	-	81	73.981	ENSSBOG00000029129	-	99	73.981	Saimiri_boliviensis_boliviensis
ENSMALG00000003045	-	64	71.484	ENSSFOG00015011225	-	67	71.094	Scleropages_formosus