EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000003337 (Gene tree)
Gene ID: 109964694
Gene Symbol: rbfox1
Alias: a2bp1|zgc:103635
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 177827 bases
Position: chrKV884780.1:1848504-2026330
Accession: 109964694
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000004587	Fox-1_C	PF12414.8	6.3e-43	1	1
ENSMALP00000004602	Fox-1_C	PF12414.8	1.1e-42	1	1
ENSMALP00000004619	Fox-1_C	PF12414.8	1.1e-42	1	1
ENSMALP00000004652	Fox-1_C	PF12414.8	2e-20	1	1
ENSMALP00000004619	RRM_1	PF00076.22	1.5e-17	1	1
ENSMALP00000004602	RRM_1	PF00076.22	1.7e-17	1	1
ENSMALP00000004652	RRM_1	PF00076.22	1.9e-17	1	1
ENSMALP00000004587	RRM_1	PF00076.22	2.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000004710	-	6751	XM_020608180	ENSMALP00000004602	468 (aa)	XP_020463836	UPI0009B38C1D
ENSMALT00000004695	-	6189	XM_020608189	ENSMALP00000004587	381 (aa)	XP_020463845	UPI0009B35EFF
ENSMALT00000004761	-	1347	-	ENSMALP00000004652	448 (aa)	-	-
ENSMALT00000004727	-	1723	XM_020608185	ENSMALP00000004619	444 (aa)	XP_020463841	-

Gene Model

Click here to download ENSMALG00000003337's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000003337's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000003337	rbfox1	87	68.060	ENSMALG00000020407	rbfox3b	95	64.167
ENSMALG00000003337	rbfox1	98	63.467	ENSMALG00000018270	-	98	61.934
ENSMALG00000003337	rbfox1	62	62.595	ENSMALG00000000623	rbfox2	99	68.376
ENSMALG00000003337	rbfox1	95	50.133	ENSMALG00000009384	rbfox1l	81	55.891

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000003337	rbfox1	100	81.414	ENSG00000078328	RBFOX1	100	81.414	Homo_sapiens
ENSMALG00000003337	rbfox1	100	90.722	ENSAPOG00000003197	rbfox1	100	92.214	Acanthochromis_polyacanthus
ENSMALG00000003337	rbfox1	61	72.650	ENSAMEG00000008605	RBFOX1	94	70.968	Ailuropoda_melanoleuca
ENSMALG00000003337	rbfox1	63	73.978	ENSACIG00000005478	rbfox1	68	73.978	Amphilophus_citrinellus
ENSMALG00000003337	rbfox1	72	88.214	ENSAOCG00000008283	rbfox1	97	87.676	Amphiprion_ocellaris
ENSMALG00000003337	rbfox1	94	73.670	ENSAPEG00000010636	rbfox1	100	75.000	Amphiprion_percula
ENSMALG00000003337	rbfox1	72	86.879	ENSATEG00000007513	rbfox1	100	89.457	Anabas_testudineus
ENSMALG00000003337	rbfox1	99	75.616	ENSAPLG00000013263	RBFOX1	99	75.616	Anas_platyrhynchos
ENSMALG00000003337	rbfox1	99	73.594	ENSACAG00000004013	RBFOX1	98	74.752	Anolis_carolinensis
ENSMALG00000003337	rbfox1	98	81.600	ENSANAG00000029527	RBFOX1	97	81.915	Aotus_nancymaae
ENSMALG00000003337	rbfox1	60	73.246	ENSAMXG00000002431	rbfox1	73	77.099	Astyanax_mexicanus
ENSMALG00000003337	rbfox1	98	73.881	ENSBTAG00000007210	RBFOX1	98	74.010	Bos_taurus
ENSMALG00000003337	rbfox1	98	79.787	ENSCJAG00000017351	RBFOX1	100	75.303	Callithrix_jacchus
ENSMALG00000003337	rbfox1	98	74.442	ENSCAFG00000019082	RBFOX1	99	71.101	Canis_familiaris
ENSMALG00000003337	rbfox1	66	69.395	ENSCAFG00020024881	RBFOX1	86	63.720	Canis_lupus_dingo
ENSMALG00000003337	rbfox1	98	73.632	ENSCHIG00000023549	RBFOX1	98	73.762	Capra_hircus
ENSMALG00000003337	rbfox1	98	82.038	ENSTSYG00000005334	RBFOX1	100	82.038	Carlito_syrichta
ENSMALG00000003337	rbfox1	98	76.500	ENSCAPG00000017669	RBFOX1	100	76.500	Cavia_aperea
ENSMALG00000003337	rbfox1	100	76.039	ENSCPOG00000011314	RBFOX1	100	76.039	Cavia_porcellus
ENSMALG00000003337	rbfox1	98	81.600	ENSCCAG00000023031	RBFOX1	97	81.915	Cebus_capucinus
ENSMALG00000003337	rbfox1	98	81.600	ENSCATG00000033816	RBFOX1	97	81.915	Cercocebus_atys
ENSMALG00000003337	rbfox1	100	75.550	ENSCLAG00000012761	RBFOX1	100	75.550	Chinchilla_lanigera
ENSMALG00000003337	rbfox1	83	72.012	ENSCSAG00000008739	RBFOX1	89	72.174	Chlorocebus_sabaeus
ENSMALG00000003337	rbfox1	67	89.231	ENSCHOG00000012843	RBFOX1	70	89.231	Choloepus_hoffmanni
ENSMALG00000003337	rbfox1	100	80.779	ENSCPBG00000026626	RBFOX1	99	81.535	Chrysemys_picta_bellii
ENSMALG00000003337	rbfox1	98	81.600	ENSCANG00000033125	RBFOX1	97	81.915	Colobus_angolensis_palliatus
ENSMALG00000003337	rbfox1	100	75.306	ENSCGRG00001013729	Rbfox1	100	75.306	Cricetulus_griseus_chok1gshd
ENSMALG00000003337	rbfox1	100	75.306	ENSCGRG00000003272	Rbfox1	100	75.306	Cricetulus_griseus_crigri
ENSMALG00000003337	rbfox1	94	80.270	ENSCSEG00000008840	rbfox1	100	80.000	Cynoglossus_semilaevis
ENSMALG00000003337	rbfox1	100	78.796	ENSDARG00000014746	rbfox1	100	80.940	Danio_rerio
ENSMALG00000003337	rbfox1	98	75.871	ENSDNOG00000043612	RBFOX1	99	73.427	Dasypus_novemcinctus
ENSMALG00000003337	rbfox1	98	75.062	ENSDORG00000010024	Rbfox1	100	73.850	Dipodomys_ordii
ENSMALG00000003337	rbfox1	98	63.433	ENSETEG00000003771	RBFOX1	100	60.592	Echinops_telfairi
ENSMALG00000003337	rbfox1	100	74.757	ENSEASG00005011599	RBFOX1	98	76.082	Equus_asinus_asinus
ENSMALG00000003337	rbfox1	100	73.924	ENSECAG00000012667	RBFOX1	99	74.941	Equus_caballus
ENSMALG00000003337	rbfox1	56	73.364	ENSELUG00000013096	rbfox1	66	72.430	Esox_lucius
ENSMALG00000003337	rbfox1	100	80.260	ENSFCAG00000025322	RBFOX1	99	80.142	Felis_catus
ENSMALG00000003337	rbfox1	83	72.464	ENSFALG00000004027	RBFOX1	99	73.607	Ficedula_albicollis
ENSMALG00000003337	rbfox1	100	75.795	ENSFDAG00000007388	RBFOX1	100	75.795	Fukomys_damarensis
ENSMALG00000003337	rbfox1	98	73.697	ENSGALG00000034325	RBFOX1	100	70.000	Gallus_gallus
ENSMALG00000003337	rbfox1	98	80.319	ENSGAGG00000023681	RBFOX1	100	77.062	Gopherus_agassizii
ENSMALG00000003337	rbfox1	98	81.600	ENSGGOG00000016871	-	97	81.915	Gorilla_gorilla
ENSMALG00000003337	rbfox1	100	75.795	ENSHGLG00000016944	RBFOX1	100	75.795	Heterocephalus_glaber_female
ENSMALG00000003337	rbfox1	100	75.795	ENSHGLG00100003272	RBFOX1	100	75.795	Heterocephalus_glaber_male
ENSMALG00000003337	rbfox1	84	83.077	ENSHCOG00000016419	rbfox1	92	81.515	Hippocampus_comes
ENSMALG00000003337	rbfox1	94	81.667	ENSIPUG00000015215	rbfox1	100	83.380	Ictalurus_punctatus
ENSMALG00000003337	rbfox1	100	76.039	ENSSTOG00000000322	RBFOX1	100	76.039	Ictidomys_tridecemlineatus
ENSMALG00000003337	rbfox1	100	74.817	ENSJJAG00000002575	Rbfox1	100	74.572	Jaculus_jaculus
ENSMALG00000003337	rbfox1	95	86.413	ENSLBEG00000014659	rbfox1	99	86.034	Labrus_bergylta
ENSMALG00000003337	rbfox1	98	75.309	ENSLOCG00000006675	rbfox1	100	74.634	Lepisosteus_oculatus
ENSMALG00000003337	rbfox1	73	81.877	ENSLAFG00000011480	RBFOX1	100	81.877	Loxodonta_africana
ENSMALG00000003337	rbfox1	98	81.600	ENSMFAG00000036447	RBFOX1	97	81.915	Macaca_fascicularis
ENSMALG00000003337	rbfox1	98	81.600	ENSMMUG00000003458	RBFOX1	97	81.915	Macaca_mulatta
ENSMALG00000003337	rbfox1	98	73.945	ENSMNEG00000032034	RBFOX1	100	70.227	Macaca_nemestrina
ENSMALG00000003337	rbfox1	98	81.600	ENSMLEG00000015382	RBFOX1	97	81.915	Mandrillus_leucophaeus
ENSMALG00000003337	rbfox1	94	88.219	ENSMAMG00000003142	rbfox1	100	89.589	Mastacembelus_armatus
ENSMALG00000003337	rbfox1	70	71.672	ENSMGAG00000008606	RBFOX1	97	71.864	Meleagris_gallopavo
ENSMALG00000003337	rbfox1	99	43.544	ENSMAUG00000020570	Rbfox1	99	43.797	Mesocricetus_auratus
ENSMALG00000003337	rbfox1	98	81.333	ENSMICG00000034286	RBFOX1	99	80.570	Microcebus_murinus
ENSMALG00000003337	rbfox1	100	75.550	ENSMOCG00000020932	Rbfox1	100	75.550	Microtus_ochrogaster
ENSMALG00000003337	rbfox1	84	82.866	ENSMMOG00000009716	rbfox1	86	82.243	Mola_mola
ENSMALG00000003337	rbfox1	79	73.030	ENSMODG00000005826	RBFOX1	90	73.030	Monodelphis_domestica
ENSMALG00000003337	rbfox1	100	75.550	MGP_CAROLIEiJ_G0020427	Rbfox1	100	75.550	Mus_caroli
ENSMALG00000003337	rbfox1	100	75.795	ENSMUSG00000008658	Rbfox1	99	86.364	Mus_musculus
ENSMALG00000003337	rbfox1	100	75.550	MGP_PahariEiJ_G0016135	Rbfox1	100	75.550	Mus_pahari
ENSMALG00000003337	rbfox1	100	75.550	MGP_SPRETEiJ_G0021321	Rbfox1	100	75.550	Mus_spretus
ENSMALG00000003337	rbfox1	83	71.512	ENSMPUG00000014822	RBFOX1	90	67.905	Mustela_putorius_furo
ENSMALG00000003337	rbfox1	73	82.143	ENSMLUG00000015896	RBFOX1	100	82.143	Myotis_lucifugus
ENSMALG00000003337	rbfox1	100	75.306	ENSNGAG00000023276	Rbfox1	100	76.250	Nannospalax_galili
ENSMALG00000003337	rbfox1	98	69.576	ENSNBRG00000011084	rbfox1	95	69.727	Neolamprologus_brichardi
ENSMALG00000003337	rbfox1	98	81.333	ENSNLEG00000010017	-	97	81.649	Nomascus_leucogenys
ENSMALG00000003337	rbfox1	77	92.308	ENSMEUG00000012525	RBFOX1	74	92.308	Notamacropus_eugenii
ENSMALG00000003337	rbfox1	86	74.348	ENSOPRG00000006199	-	83	68.539	Ochotona_princeps
ENSMALG00000003337	rbfox1	100	76.039	ENSODEG00000013166	RBFOX1	100	76.039	Octodon_degus
ENSMALG00000003337	rbfox1	83	71.720	ENSOANG00000002379	RBFOX1	89	71.884	Ornithorhynchus_anatinus
ENSMALG00000003337	rbfox1	62	73.418	ENSOCUG00000001205	-	100	73.418	Oryctolagus_cuniculus
ENSMALG00000003337	rbfox1	100	74.817	ENSOGAG00000025535	RBFOX1	100	74.817	Otolemur_garnettii
ENSMALG00000003337	rbfox1	61	64.103	ENSOARG00000005135	RBFOX1	87	64.103	Ovis_aries
ENSMALG00000003337	rbfox1	98	82.038	ENSPPAG00000036238	-	100	82.038	Pan_paniscus
ENSMALG00000003337	rbfox1	98	81.867	ENSPPRG00000006546	RBFOX1	99	81.462	Panthera_pardus
ENSMALG00000003337	rbfox1	100	69.231	ENSPTIG00000021154	RBFOX1	100	67.513	Panthera_tigris_altaica
ENSMALG00000003337	rbfox1	98	81.600	ENSPTRG00000007744	RBFOX1	97	81.915	Pan_troglodytes
ENSMALG00000003337	rbfox1	98	81.600	ENSPANG00000026500	RBFOX1	97	81.915	Papio_anubis
ENSMALG00000003337	rbfox1	100	81.414	ENSPKIG00000009667	-	95	82.571	Paramormyrops_kingsleyae
ENSMALG00000003337	rbfox1	73	78.417	ENSPKIG00000019353	rbfox1	89	79.935	Paramormyrops_kingsleyae
ENSMALG00000003337	rbfox1	98	76.808	ENSPSIG00000006523	RBFOX1	98	76.923	Pelodiscus_sinensis
ENSMALG00000003337	rbfox1	100	75.550	ENSPEMG00000017607	Rbfox1	100	75.550	Peromyscus_maniculatus_bairdii
ENSMALG00000003337	rbfox1	69	78.276	ENSPCIG00000026887	RBFOX1	100	78.276	Phascolarctos_cinereus
ENSMALG00000003337	rbfox1	83	71.802	ENSPPYG00000007079	-	91	67.717	Pongo_abelii
ENSMALG00000003337	rbfox1	88	66.667	ENSPCAG00000002630	RBFOX1	97	65.252	Procavia_capensis
ENSMALG00000003337	rbfox1	98	81.333	ENSPCOG00000025687	RBFOX1	99	80.570	Propithecus_coquereli
ENSMALG00000003337	rbfox1	98	70.223	ENSPVAG00000013467	RBFOX1	99	66.972	Pteropus_vampyrus
ENSMALG00000003337	rbfox1	94	78.364	ENSPNAG00000023109	rbfox1	100	80.000	Pygocentrus_nattereri
ENSMALG00000003337	rbfox1	98	75.373	ENSRNOG00000002827	Rbfox1	97	74.279	Rattus_norvegicus
ENSMALG00000003337	rbfox1	98	82.038	ENSRBIG00000044478	RBFOX1	100	82.038	Rhinopithecus_bieti
ENSMALG00000003337	rbfox1	98	81.600	ENSRROG00000044411	RBFOX1	97	81.915	Rhinopithecus_roxellana
ENSMALG00000003337	rbfox1	98	81.600	ENSSBOG00000033726	RBFOX1	97	81.915	Saimiri_boliviensis_boliviensis
ENSMALG00000003337	rbfox1	100	75.795	ENSSHAG00000009257	RBFOX1	100	75.795	Sarcophilus_harrisii
ENSMALG00000003337	rbfox1	88	69.461	ENSSFOG00015009955	-	85	69.318	Scleropages_formosus
ENSMALG00000003337	rbfox1	98	68.182	ENSSFOG00015023675	rbfox1	98	67.819	Scleropages_formosus
ENSMALG00000003337	rbfox1	98	90.237	ENSSMAG00000015505	rbfox1	100	91.220	Scophthalmus_maximus
ENSMALG00000003337	rbfox1	99	86.207	ENSSDUG00000016413	rbfox1	100	85.979	Seriola_dumerili
ENSMALG00000003337	rbfox1	84	85.670	ENSSLDG00000009353	rbfox1	98	90.663	Seriola_lalandi_dorsalis
ENSMALG00000003337	rbfox1	84	76.543	ENSSPUG00000009732	RBFOX1	87	76.543	Sphenodon_punctatus
ENSMALG00000003337	rbfox1	98	90.501	ENSSPAG00000009723	rbfox1	100	90.765	Stegastes_partitus
ENSMALG00000003337	rbfox1	95	74.807	ENSSSCG00000007917	RBFOX1	97	71.327	Sus_scrofa
ENSMALG00000003337	rbfox1	98	76.808	ENSTGUG00000004562	RBFOX1	100	77.057	Taeniopygia_guttata
ENSMALG00000003337	rbfox1	98	89.947	ENSTRUG00000020940	rbfox1	99	89.683	Takifugu_rubripes
ENSMALG00000003337	rbfox1	63	65.505	ENSTNIG00000002567	rbfox1	100	67.247	Tetraodon_nigroviridis
ENSMALG00000003337	rbfox1	62	88.235	ENSTBEG00000009169	-	56	88.235	Tupaia_belangeri
ENSMALG00000003337	rbfox1	98	73.697	ENSTTRG00000005700	RBFOX1	99	70.413	Tursiops_truncatus
ENSMALG00000003337	rbfox1	100	69.927	ENSUAMG00000024633	RBFOX1	100	74.054	Ursus_americanus
ENSMALG00000003337	rbfox1	100	66.582	ENSUMAG00000003579	RBFOX1	100	66.753	Ursus_maritimus
ENSMALG00000003337	rbfox1	73	79.288	ENSVPAG00000001284	RBFOX1	74	79.288	Vicugna_pacos
ENSMALG00000003337	rbfox1	100	80.260	ENSVVUG00000017311	RBFOX1	99	80.815	Vulpes_vulpes