EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMALG00000003388 (Gene tree)
Gene ID
109973454
Gene Symbol
smarca4a
Alias
brahma-related gene 1|brg1|smarca2|smarca4|wu:fb51a08|yng|young
Full Name
SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 4
Gene Type
protein_coding
Species
Monopterus_albus
Status
putative
Strand
Plus strand
Length
20527 bases
Position
chrKV884980.1:979912-1000438
Accession
109973454
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMALP00000004761ResIIIPF04851.151.1e-0811
ENSMALP00000004738ResIIIPF04851.151.1e-0811
ENSMALP00000004761BRKPF07533.161.4e-1611
ENSMALP00000004738BRKPF07533.161.4e-1611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMALT00000004871-4836-ENSMALP000000047611611 (aa)--
ENSMALT00000004847-6566XM_020623071ENSMALP000000047381628 (aa)XP_020478727UPI0009B4791E
Gene Model
Click here to download ENSMALG00000003388's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000003388's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMALG00000003388smarca4a8984.562ENSMALG00000021534-9685.217
ENSMALG00000003388smarca4a9969.736ENSMALG00000009611SMARCA29371.598
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMALG00000003388smarca4a10087.248ENSG00000127616SMARCA499100.000Homo_sapiens
ENSMALG00000003388smarca4a7793.487ENSAPOG00000003509smarca4a9990.980Acanthochromis_polyacanthus
ENSMALG00000003388smarca4a9584.270ENSAPOG00000004542SMARCA49685.580Acanthochromis_polyacanthus
ENSMALG00000003388smarca4a10083.030ENSAMEG00000010868SMARCA49783.040Ailuropoda_melanoleuca
ENSMALG00000003388smarca4a9485.537ENSACIG00000003035-9385.724Amphilophus_citrinellus
ENSMALG00000003388smarca4a9996.114ENSACIG00000021550smarca4a9996.114Amphilophus_citrinellus
ENSMALG00000003388smarca4a9486.532ENSAOCG00000009450-9487.843Amphiprion_ocellaris
ENSMALG00000003388smarca4a9092.455ENSAOCG00000019167smarca4a10092.926Amphiprion_ocellaris
ENSMALG00000003388smarca4a9092.593ENSAPEG00000015559smarca4a10093.065Amphiprion_percula
ENSMALG00000003388smarca4a9883.260ENSAPEG00000023108-9583.126Amphiprion_percula
ENSMALG00000003388smarca4a9984.802ENSATEG00000001094-9584.980Anabas_testudineus
ENSMALG00000003388smarca4a10096.017ENSATEG00000011524smarca4a10096.017Anabas_testudineus
ENSMALG00000003388smarca4a9987.624ENSANAG00000036991SMARCA49783.121Aotus_nancymaae
ENSMALG00000003388smarca4a9895.337ENSACLG00000000163smarca4a9694.669Astatotilapia_calliptera
ENSMALG00000003388smarca4a9585.364ENSACLG00000008638-9484.949Astatotilapia_calliptera
ENSMALG00000003388smarca4a9883.698ENSAMXG00000021023smarca4a9886.216Astyanax_mexicanus
ENSMALG00000003388smarca4a9487.256ENSAMXG00000011238-9487.153Astyanax_mexicanus
ENSMALG00000003388smarca4a10087.209ENSBTAG00000019220SMARCA49687.310Bos_taurus
ENSMALG00000003388smarca4a10083.226ENSCJAG00000005936SMARCA49288.810Callithrix_jacchus
ENSMALG00000003388smarca4a10086.951ENSCAFG00000017584SMARCA49687.105Canis_familiaris
ENSMALG00000003388smarca4a10086.951ENSCAFG00020024620SMARCA49587.105Canis_lupus_dingo
ENSMALG00000003388smarca4a10083.619ENSCHIG00000015318SMARCA49683.587Capra_hircus
ENSMALG00000003388smarca4a10086.903ENSTSYG00000012966SMARCA49687.119Carlito_syrichta
ENSMALG00000003388smarca4a9480.772ENSCAPG00000015932SMARCA49589.948Cavia_aperea
ENSMALG00000003388smarca4a10086.768ENSCPOG00000015549SMARCA49687.933Cavia_porcellus
ENSMALG00000003388smarca4a10083.152ENSCCAG00000031660SMARCA49584.465Cebus_capucinus
ENSMALG00000003388smarca4a10087.195ENSCATG00000029530SMARCA49687.105Cercocebus_atys
ENSMALG00000003388smarca4a10086.957ENSCLAG00000011946SMARCA49686.962Chinchilla_lanigera
ENSMALG00000003388smarca4a10087.241ENSCPBG00000009994SMARCA49686.962Chrysemys_picta_bellii
ENSMALG00000003388smarca4a10087.134ENSCANG00000036013SMARCA49687.105Colobus_angolensis_palliatus
ENSMALG00000003388smarca4a10087.012ENSCGRG00001016732Smarca49687.105Cricetulus_griseus_chok1gshd
ENSMALG00000003388smarca4a10087.012ENSCGRG00000017242Smarca49687.105Cricetulus_griseus_crigri
ENSMALG00000003388smarca4a9694.151ENSCSEG00000014771smarca4a9694.215Cynoglossus_semilaevis
ENSMALG00000003388smarca4a9993.176ENSCVAG00000006979smarca4a9693.243Cyprinodon_variegatus
ENSMALG00000003388smarca4a9885.229ENSCVAG00000003018-9484.997Cyprinodon_variegatus
ENSMALG00000003388smarca4a9284.764ENSDARG00000104339SMARCA49484.225Danio_rerio
ENSMALG00000003388smarca4a10089.872ENSDARG00000077226smarca4a9689.627Danio_rerio
ENSMALG00000003388smarca4a10078.293ENSDNOG00000048847SMARCA49090.693Dasypus_novemcinctus
ENSMALG00000003388smarca4a8482.832ENSDORG00000002544Smarca49180.205Dipodomys_ordii
ENSMALG00000003388smarca4a9476.501ENSETEG00000013361SMARCA49076.376Echinops_telfairi
ENSMALG00000003388smarca4a10086.768ENSEASG00005006167SMARCA49786.183Equus_asinus_asinus
ENSMALG00000003388smarca4a10086.829ENSECAG00000008334SMARCA49686.915Equus_caballus
ENSMALG00000003388smarca4a9979.200ENSELUG00000023232-9683.261Esox_lucius
ENSMALG00000003388smarca4a10089.509ENSELUG00000010247smarca4a9789.378Esox_lucius
ENSMALG00000003388smarca4a10086.914ENSFCAG00000004894SMARCA49687.003Felis_catus
ENSMALG00000003388smarca4a9184.228ENSFALG00000004208SMARCA49285.909Ficedula_albicollis
ENSMALG00000003388smarca4a9287.301ENSFDAG00000012237SMARCA49388.375Fukomys_damarensis
ENSMALG00000003388smarca4a9692.196ENSFHEG00000010182smarca4a9692.196Fundulus_heteroclitus
ENSMALG00000003388smarca4a10084.836ENSFHEG00000007902-9782.561Fundulus_heteroclitus
ENSMALG00000003388smarca4a9190.492ENSGMOG00000002649smarca4a9091.071Gadus_morhua
ENSMALG00000003388smarca4a9080.756ENSGMOG00000005756-9079.639Gadus_morhua
ENSMALG00000003388smarca4a7387.584ENSGALG00000047145SMARCA49587.034Gallus_gallus
ENSMALG00000003388smarca4a9092.328ENSGAFG00000014900smarca4a9993.266Gambusia_affinis
ENSMALG00000003388smarca4a9882.327ENSGAFG00000008827-9482.560Gambusia_affinis
ENSMALG00000003388smarca4a9980.589ENSGACG00000016033-9580.364Gasterosteus_aculeatus
ENSMALG00000003388smarca4a9893.688ENSGACG00000006691smarca4a9793.608Gasterosteus_aculeatus
ENSMALG00000003388smarca4a10087.462ENSGAGG00000016757SMARCA49687.191Gopherus_agassizii
ENSMALG00000003388smarca4a10087.195ENSGGOG00000009882SMARCA49687.105Gorilla_gorilla
ENSMALG00000003388smarca4a10085.207ENSHBUG00000005447-9485.220Haplochromis_burtoni
ENSMALG00000003388smarca4a10095.767ENSHBUG00000021172smarca4a10095.313Haplochromis_burtoni
ENSMALG00000003388smarca4a10086.339ENSHGLG00000010519SMARCA49686.532Heterocephalus_glaber_female
ENSMALG00000003388smarca4a10086.419ENSHGLG00100013774SMARCA49686.364Heterocephalus_glaber_male
ENSMALG00000003388smarca4a9594.774ENSHCOG00000009510smarca4a9394.511Hippocampus_comes
ENSMALG00000003388smarca4a10090.415ENSIPUG00000006107smarca4a9690.253Ictalurus_punctatus
ENSMALG00000003388smarca4a9885.250ENSIPUG00000016346-9784.801Ictalurus_punctatus
ENSMALG00000003388smarca4a10086.890ENSSTOG00000007939SMARCA49686.979Ictidomys_tridecemlineatus
ENSMALG00000003388smarca4a10084.997ENSJJAG00000012877Smarca49684.259Jaculus_jaculus
ENSMALG00000003388smarca4a10092.407ENSKMAG00000011931smarca4a9692.917Kryptolebias_marmoratus
ENSMALG00000003388smarca4a10084.478ENSKMAG00000019518-9487.720Kryptolebias_marmoratus
ENSMALG00000003388smarca4a9981.818ENSLBEG00000020655-9482.115Labrus_bergylta
ENSMALG00000003388smarca4a9590.891ENSLBEG00000017383smarca4a9490.247Labrus_bergylta
ENSMALG00000003388smarca4a5182.713ENSLACG00000015309SMARCA410082.593Latimeria_chalumnae
ENSMALG00000003388smarca4a10085.915ENSLOCG00000007820smarca4a9686.159Lepisosteus_oculatus
ENSMALG00000003388smarca4a10086.792ENSLAFG00000001433SMARCA49686.877Loxodonta_africana
ENSMALG00000003388smarca4a10087.195ENSMFAG00000032146SMARCA49587.105Macaca_fascicularis
ENSMALG00000003388smarca4a10087.195ENSMMUG00000012042SMARCA49591.768Macaca_mulatta
ENSMALG00000003388smarca4a10087.546ENSMNEG00000028512SMARCA49687.468Macaca_nemestrina
ENSMALG00000003388smarca4a10087.195ENSMLEG00000034976SMARCA49686.940Mandrillus_leucophaeus
ENSMALG00000003388smarca4a10096.444ENSMAMG00000009256smarca4a10096.444Mastacembelus_armatus
ENSMALG00000003388smarca4a9487.688ENSMAMG00000002841-9488.103Mastacembelus_armatus
ENSMALG00000003388smarca4a9585.958ENSMZEG00005023861-9484.303Maylandia_zebra
ENSMALG00000003388smarca4a10095.769ENSMZEG00005003889smarca4a9695.486Maylandia_zebra
ENSMALG00000003388smarca4a10086.732ENSMAUG00000020731Smarca49686.814Mesocricetus_auratus
ENSMALG00000003388smarca4a10086.792ENSMICG00000009806SMARCA49686.940Microcebus_murinus
ENSMALG00000003388smarca4a10086.732ENSMOCG00000022209Smarca49686.814Microtus_ochrogaster
ENSMALG00000003388smarca4a9593.092ENSMMOG00000007571smarca4a9493.235Mola_mola
ENSMALG00000003388smarca4a9983.114ENSMMOG00000008466-9582.145Mola_mola
ENSMALG00000003388smarca4a10085.800ENSMODG00000006287SMARCA49684.916Monodelphis_domestica
ENSMALG00000003388smarca4a10087.004MGP_CAROLIEiJ_G0031879Smarca410086.378Mus_caroli
ENSMALG00000003388smarca4a10087.004ENSMUSG00000032187Smarca49986.378Mus_musculus
ENSMALG00000003388smarca4a10087.446MGP_PahariEiJ_G0014745Smarca410086.946Mus_pahari
ENSMALG00000003388smarca4a10087.004MGP_SPRETEiJ_G0033003Smarca410086.378Mus_spretus
ENSMALG00000003388smarca4a10087.012ENSMPUG00000005711SMARCA49687.105Mustela_putorius_furo
ENSMALG00000003388smarca4a10087.134ENSMLUG00000004491-9687.168Myotis_lucifugus
ENSMALG00000003388smarca4a10086.919ENSNGAG00000021852Smarca49687.199Nannospalax_galili
ENSMALG00000003388smarca4a8985.100ENSNBRG00000018865-9685.022Neolamprologus_brichardi
ENSMALG00000003388smarca4a9792.244ENSNBRG00000011457smarca4a9892.244Neolamprologus_brichardi
ENSMALG00000003388smarca4a9585.058ENSNLEG00000012389SMARCA49185.425Nomascus_leucogenys
ENSMALG00000003388smarca4a8096.552ENSOPRG00000000885-7896.552Ochotona_princeps
ENSMALG00000003388smarca4a10084.271ENSODEG00000017127SMARCA49684.005Octodon_degus
ENSMALG00000003388smarca4a10095.767ENSONIG00000008196smarca4a10095.031Oreochromis_niloticus
ENSMALG00000003388smarca4a10085.328ENSONIG00000018040-9584.005Oreochromis_niloticus
ENSMALG00000003388smarca4a9781.841ENSOCUG00000001787SMARCA49481.332Oryctolagus_cuniculus
ENSMALG00000003388smarca4a9584.465ENSORLG00000003955-9880.751Oryzias_latipes
ENSMALG00000003388smarca4a9692.762ENSORLG00000015452smarca4a9692.508Oryzias_latipes
ENSMALG00000003388smarca4a10092.468ENSORLG00020004611smarca4a9692.508Oryzias_latipes_hni
ENSMALG00000003388smarca4a9584.538ENSORLG00020009728-9880.972Oryzias_latipes_hni
ENSMALG00000003388smarca4a10092.529ENSORLG00015016560smarca4a9891.124Oryzias_latipes_hsok
ENSMALG00000003388smarca4a9984.195ENSORLG00015007739-9583.438Oryzias_latipes_hsok
ENSMALG00000003388smarca4a9784.295ENSOMEG00000016626-9583.828Oryzias_melastigma
ENSMALG00000003388smarca4a10092.949ENSOMEG00000007486smarca4a9693.071Oryzias_melastigma
ENSMALG00000003388smarca4a8986.088ENSOGAG00000016148SMARCA49686.370Otolemur_garnettii
ENSMALG00000003388smarca4a10086.667ENSOARG00000017454SMARCA49786.929Ovis_aries
ENSMALG00000003388smarca4a10087.195ENSPPAG00000043191SMARCA49687.105Pan_paniscus
ENSMALG00000003388smarca4a10086.914ENSPPRG00000000064SMARCA49687.003Panthera_pardus
ENSMALG00000003388smarca4a10087.195ENSPTRG00000010488SMARCA49687.105Pan_troglodytes
ENSMALG00000003388smarca4a10087.485ENSPANG00000011042SMARCA49587.405Papio_anubis
ENSMALG00000003388smarca4a10089.628ENSPKIG00000007770SMARCA49689.690Paramormyrops_kingsleyae
ENSMALG00000003388smarca4a10086.160ENSPKIG00000010087-9786.251Paramormyrops_kingsleyae
ENSMALG00000003388smarca4a10081.927ENSPSIG00000005547SMARCA49681.541Pelodiscus_sinensis
ENSMALG00000003388smarca4a10086.792ENSPEMG00000020389Smarca49686.877Peromyscus_maniculatus_bairdii
ENSMALG00000003388smarca4a10087.416ENSPCIG00000017138SMARCA49687.144Phascolarctos_cinereus
ENSMALG00000003388smarca4a10084.069ENSPFOG00000012930-9583.177Poecilia_formosa
ENSMALG00000003388smarca4a10091.312ENSPFOG00000007892smarca4a9692.128Poecilia_formosa
ENSMALG00000003388smarca4a8490.155ENSPLAG00000018616-9686.671Poecilia_latipinna
ENSMALG00000003388smarca4a10091.312ENSPLAG00000014294smarca4a9692.128Poecilia_latipinna
ENSMALG00000003388smarca4a9585.380ENSPMEG00000008929-9684.784Poecilia_mexicana
ENSMALG00000003388smarca4a9592.013ENSPMEG00000003725smarca4a9392.568Poecilia_mexicana
ENSMALG00000003388smarca4a9585.060ENSPREG00000014823-9681.210Poecilia_reticulata
ENSMALG00000003388smarca4a10091.641ENSPREG00000014608smarca4a9691.839Poecilia_reticulata
ENSMALG00000003388smarca4a10085.415ENSPPYG00000009568SMARCA49684.149Pongo_abelii
ENSMALG00000003388smarca4a7986.093ENSPCAG00000014054SMARCA47291.406Procavia_capensis
ENSMALG00000003388smarca4a10087.012ENSPCOG00000023011SMARCA49687.003Propithecus_coquereli
ENSMALG00000003388smarca4a9682.671ENSPVAG00000007787SMARCA49384.328Pteropus_vampyrus
ENSMALG00000003388smarca4a9485.079ENSPNYG00000023995-9485.384Pundamilia_nyererei
ENSMALG00000003388smarca4a9595.930ENSPNYG00000000717smarca4a9395.912Pundamilia_nyererei
ENSMALG00000003388smarca4a9883.879ENSPNAG00000024136smarca4a9386.139Pygocentrus_nattereri
ENSMALG00000003388smarca4a9587.018ENSPNAG00000006636-9387.073Pygocentrus_nattereri
ENSMALG00000003388smarca4a10087.004ENSRNOG00000009271Smarca49687.097Rattus_norvegicus
ENSMALG00000003388smarca4a10087.134ENSRBIG00000038696SMARCA49587.042Rhinopithecus_bieti
ENSMALG00000003388smarca4a10087.134ENSRROG00000045509SMARCA49687.042Rhinopithecus_roxellana
ENSMALG00000003388smarca4a9987.849ENSSBOG00000026896SMARCA49690.067Saimiri_boliviensis_boliviensis
ENSMALG00000003388smarca4a10087.294ENSSHAG00000001642SMARCA49687.017Sarcophilus_harrisii
ENSMALG00000003388smarca4a10090.976ENSSFOG00015013823smarca49690.582Scleropages_formosus
ENSMALG00000003388smarca4a9684.777ENSSFOG00015009921-9784.331Scleropages_formosus
ENSMALG00000003388smarca4a10093.625ENSSMAG00000003200smarca4a9693.770Scophthalmus_maximus
ENSMALG00000003388smarca4a10081.900ENSSMAG00000014082-9383.137Scophthalmus_maximus
ENSMALG00000003388smarca4a9986.857ENSSDUG00000005388-9683.865Seriola_dumerili
ENSMALG00000003388smarca4a10091.265ENSSDUG00000017298smarca4a9591.932Seriola_dumerili
ENSMALG00000003388smarca4a10095.988ENSSLDG00000024486smarca4a10095.988Seriola_lalandi_dorsalis
ENSMALG00000003388smarca4a9488.154ENSSLDG00000023663-9388.451Seriola_lalandi_dorsalis
ENSMALG00000003388smarca4a6196.273ENSSARG00000013477SMARCA48196.795Sorex_araneus
ENSMALG00000003388smarca4a9584.591ENSSPUG00000004558SMARCA49484.832Sphenodon_punctatus
ENSMALG00000003388smarca4a10094.954ENSSPAG00000004248smarca4a10094.954Stegastes_partitus
ENSMALG00000003388smarca4a10083.848ENSSPAG00000012533-9583.147Stegastes_partitus
ENSMALG00000003388smarca4a10087.097ENSSSCG00000013629SMARCA49687.003Sus_scrofa
ENSMALG00000003388smarca4a5283.749ENSTGUG00000015488-9289.147Taeniopygia_guttata
ENSMALG00000003388smarca4a9583.259ENSTRUG00000001378SMARCA49483.289Takifugu_rubripes
ENSMALG00000003388smarca4a9087.953ENSTRUG00000004885smarca4a9687.812Takifugu_rubripes
ENSMALG00000003388smarca4a10083.079ENSTNIG00000004536SMARCA49583.526Tetraodon_nigroviridis
ENSMALG00000003388smarca4a7393.238ENSTNIG00000004859-10093.238Tetraodon_nigroviridis
ENSMALG00000003388smarca4a10084.321ENSTTRG00000009519SMARCA49683.509Tursiops_truncatus
ENSMALG00000003388smarca4a10087.012ENSUAMG00000014661SMARCA49687.105Ursus_americanus
ENSMALG00000003388smarca4a9583.800ENSUMAG00000022005SMARCA49890.833Ursus_maritimus
ENSMALG00000003388smarca4a10086.951ENSVVUG00000017820SMARCA49487.105Vulpes_vulpes
ENSMALG00000003388smarca4a10082.402ENSXETG00000009355smarca49781.456Xenopus_tropicalis
ENSMALG00000003388smarca4a9982.919ENSXCOG00000013494-9484.031Xiphophorus_couchianus
ENSMALG00000003388smarca4a10084.703ENSXMAG00000007030-9584.892Xiphophorus_maculatus
ENSMALG00000003388smarca4a10091.707ENSXMAG00000006321smarca4a9691.846Xiphophorus_maculatus

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