EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000003547 (Gene tree)
Gene ID: 109956697
Gene Symbol: NCBP1
Alias: CBP80|NCBP|Sto1
Full Name: nuclear cap binding protein subunit 1
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 12675 bases
Position: chrKV884709.1:3352245-3364919
Accession: 109956697
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000004970	MIF4G_like	PF09088.11	8.3e-37	1	1
ENSMALP00000005007	MIF4G_like	PF09088.11	1.1e-36	1	1
ENSMALP00000005007	MIF4G_like_2	PF09090.11	1.2e-85	1	1
ENSMALP00000004970	MIF4G_like_2	PF09090.11	1.8e-85	1	1
ENSMALP00000004970	MIF4G	PF02854.19	9.8e-27	1	1
ENSMALP00000005007	MIF4G	PF02854.19	2.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000005081	NCBP1-201	6753	XM_020594024	ENSMALP00000004970	795 (aa)	XP_020449680	UPI0009B48FD4
ENSMALT00000005120	NCBP1-202	2376	-	ENSMALP00000005007	791 (aa)	-	-

Gene Model

Click here to download ENSMALG00000003547's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb03013	RNA transport	KEGG
malb03015	mRNA surveillance pathway	KEGG
malb03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000003547's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000003547	NCBP1	99	81.990	ENSG00000136937	NCBP1	99	82.494	Homo_sapiens
ENSMALG00000003547	NCBP1	100	96.730	ENSAPOG00000008002	NCBP1	100	96.730	Acanthochromis_polyacanthus
ENSMALG00000003547	NCBP1	99	82.161	ENSAMEG00000004763	NCBP1	99	82.663	Ailuropoda_melanoleuca
ENSMALG00000003547	NCBP1	100	95.975	ENSACIG00000000274	NCBP1	100	95.975	Amphilophus_citrinellus
ENSMALG00000003547	NCBP1	100	96.352	ENSAOCG00000021148	NCBP1	100	96.352	Amphiprion_ocellaris
ENSMALG00000003547	NCBP1	100	96.352	ENSAPEG00000001701	NCBP1	100	96.352	Amphiprion_percula
ENSMALG00000003547	NCBP1	100	96.855	ENSATEG00000006929	NCBP1	100	96.855	Anabas_testudineus
ENSMALG00000003547	NCBP1	95	82.632	ENSAPLG00000016318	NCBP1	99	82.763	Anas_platyrhynchos
ENSMALG00000003547	NCBP1	99	83.021	ENSACAG00000004409	NCBP1	87	83.146	Anolis_carolinensis
ENSMALG00000003547	NCBP1	99	80.101	ENSANAG00000025744	NCBP1	99	81.931	Aotus_nancymaae
ENSMALG00000003547	NCBP1	100	95.849	ENSACLG00000014812	NCBP1	100	95.849	Astatotilapia_calliptera
ENSMALG00000003547	NCBP1	100	91.092	ENSAMXG00000016364	NCBP1	100	91.092	Astyanax_mexicanus
ENSMALG00000003547	NCBP1	99	82.116	ENSBTAG00000009732	NCBP1	99	87.613	Bos_taurus
ENSMALG00000003547	NCBP1	100	36.654	WBGene00018156	ncbp-1	100	36.654	Caenorhabditis_elegans
ENSMALG00000003547	NCBP1	99	82.116	ENSCJAG00000010840	NCBP1	99	86.429	Callithrix_jacchus
ENSMALG00000003547	NCBP1	99	82.242	ENSCAFG00000002445	NCBP1	99	82.746	Canis_familiaris
ENSMALG00000003547	NCBP1	98	81.969	ENSCAFG00020017997	NCBP1	96	88.778	Canis_lupus_dingo
ENSMALG00000003547	NCBP1	99	81.990	ENSCHIG00000020139	NCBP1	99	82.494	Capra_hircus
ENSMALG00000003547	NCBP1	52	86.829	ENSTSYG00000011914	NCBP1	98	86.834	Carlito_syrichta
ENSMALG00000003547	NCBP1	81	74.768	ENSCAPG00000014252	NCBP1	90	74.768	Cavia_aperea
ENSMALG00000003547	NCBP1	95	81.374	ENSCPOG00000012573	NCBP1	98	81.902	Cavia_porcellus
ENSMALG00000003547	NCBP1	99	81.990	ENSCCAG00000032297	NCBP1	99	82.494	Cebus_capucinus
ENSMALG00000003547	NCBP1	99	81.990	ENSCATG00000010052	NCBP1	99	82.494	Cercocebus_atys
ENSMALG00000003547	NCBP1	99	81.990	ENSCLAG00000014339	NCBP1	99	82.494	Chinchilla_lanigera
ENSMALG00000003547	NCBP1	99	81.990	ENSCSAG00000010929	NCBP1	99	82.494	Chlorocebus_sabaeus
ENSMALG00000003547	NCBP1	90	81.132	ENSCHOG00000010332	NCBP1	91	77.193	Choloepus_hoffmanni
ENSMALG00000003547	NCBP1	99	80.982	ENSCPBG00000024344	NCBP1	99	83.196	Chrysemys_picta_bellii
ENSMALG00000003547	NCBP1	99	53.607	ENSCING00000008990	-	99	53.607	Ciona_intestinalis
ENSMALG00000003547	NCBP1	99	53.125	ENSCSAVG00000005300	-	99	54.822	Ciona_savignyi
ENSMALG00000003547	NCBP1	99	81.990	ENSCANG00000036913	NCBP1	99	82.494	Colobus_angolensis_palliatus
ENSMALG00000003547	NCBP1	99	81.738	ENSCGRG00001015771	Ncbp1	99	82.242	Cricetulus_griseus_chok1gshd
ENSMALG00000003547	NCBP1	99	81.760	ENSCGRG00000010311	Ncbp1	99	82.143	Cricetulus_griseus_crigri
ENSMALG00000003547	NCBP1	100	96.226	ENSCSEG00000012377	NCBP1	100	96.226	Cynoglossus_semilaevis
ENSMALG00000003547	NCBP1	100	94.724	ENSCVAG00000008795	NCBP1	100	94.724	Cyprinodon_variegatus
ENSMALG00000003547	NCBP1	99	81.360	ENSDNOG00000006885	NCBP1	99	81.864	Dasypus_novemcinctus
ENSMALG00000003547	NCBP1	99	78.070	ENSDORG00000013652	Ncbp1	99	78.571	Dipodomys_ordii
ENSMALG00000003547	NCBP1	83	33.726	FBgn0038887	CG7907	87	33.726	Drosophila_melanogaster
ENSMALG00000003547	NCBP1	99	56.931	FBgn0022942	Cbp80	99	57.447	Drosophila_melanogaster
ENSMALG00000003547	NCBP1	89	78.556	ENSETEG00000009705	NCBP1	89	78.556	Echinops_telfairi
ENSMALG00000003547	NCBP1	99	73.836	ENSEBUG00000008386	NCBP1	99	73.836	Eptatretus_burgeri
ENSMALG00000003547	NCBP1	99	81.738	ENSEASG00005022795	NCBP1	99	82.242	Equus_asinus_asinus
ENSMALG00000003547	NCBP1	99	81.864	ENSECAG00000013847	NCBP1	99	82.368	Equus_caballus
ENSMALG00000003547	NCBP1	95	78.336	ENSEEUG00000015973	NCBP1	99	78.732	Erinaceus_europaeus
ENSMALG00000003547	NCBP1	100	91.960	ENSELUG00000022519	NCBP1	100	91.960	Esox_lucius
ENSMALG00000003547	NCBP1	99	82.116	ENSFCAG00000001206	NCBP1	99	82.620	Felis_catus
ENSMALG00000003547	NCBP1	98	82.930	ENSFALG00000001193	NCBP1	99	83.715	Ficedula_albicollis
ENSMALG00000003547	NCBP1	99	81.738	ENSFDAG00000010864	NCBP1	99	82.242	Fukomys_damarensis
ENSMALG00000003547	NCBP1	100	94.975	ENSFHEG00000000655	NCBP1	100	94.975	Fundulus_heteroclitus
ENSMALG00000003547	NCBP1	100	90.452	ENSGMOG00000008653	NCBP1	99	90.452	Gadus_morhua
ENSMALG00000003547	NCBP1	98	83.504	ENSGALG00000002087	NCBP1	99	83.291	Gallus_gallus
ENSMALG00000003547	NCBP1	100	95.603	ENSGAFG00000017787	NCBP1	100	95.603	Gambusia_affinis
ENSMALG00000003547	NCBP1	100	93.734	ENSGACG00000016772	NCBP1	99	93.734	Gasterosteus_aculeatus
ENSMALG00000003547	NCBP1	99	82.997	ENSGAGG00000019483	NCBP1	99	83.648	Gopherus_agassizii
ENSMALG00000003547	NCBP1	99	81.990	ENSGGOG00000001376	NCBP1	99	82.494	Gorilla_gorilla
ENSMALG00000003547	NCBP1	100	95.849	ENSHBUG00000020843	NCBP1	100	95.849	Haplochromis_burtoni
ENSMALG00000003547	NCBP1	99	81.864	ENSHGLG00000001882	NCBP1	99	82.368	Heterocephalus_glaber_female
ENSMALG00000003547	NCBP1	99	71.859	ENSHGLG00000018112	-	99	71.859	Heterocephalus_glaber_female
ENSMALG00000003547	NCBP1	99	81.864	ENSHGLG00100013014	NCBP1	99	82.368	Heterocephalus_glaber_male
ENSMALG00000003547	NCBP1	99	71.608	ENSHGLG00100017373	-	99	71.608	Heterocephalus_glaber_male
ENSMALG00000003547	NCBP1	74	87.690	ENSHCOG00000000204	NCBP1	87	87.690	Hippocampus_comes
ENSMALG00000003547	NCBP1	100	89.950	ENSIPUG00000007275	ncbp1	100	89.950	Ictalurus_punctatus
ENSMALG00000003547	NCBP1	99	82.116	ENSSTOG00000002695	NCBP1	99	82.620	Ictidomys_tridecemlineatus
ENSMALG00000003547	NCBP1	100	95.220	ENSKMAG00000003594	NCBP1	99	96.341	Kryptolebias_marmoratus
ENSMALG00000003547	NCBP1	100	93.921	ENSLBEG00000011661	NCBP1	100	93.921	Labrus_bergylta
ENSMALG00000003547	NCBP1	99	77.335	ENSLACG00000013955	NCBP1	99	77.736	Latimeria_chalumnae
ENSMALG00000003547	NCBP1	99	76.961	ENSLOCG00000009579	NCBP1	99	77.460	Lepisosteus_oculatus
ENSMALG00000003547	NCBP1	99	82.116	ENSLAFG00000005999	NCBP1	99	82.620	Loxodonta_africana
ENSMALG00000003547	NCBP1	99	81.990	ENSMFAG00000030994	NCBP1	99	82.494	Macaca_fascicularis
ENSMALG00000003547	NCBP1	98	81.865	ENSMMUG00000012281	NCBP1	99	82.295	Macaca_mulatta
ENSMALG00000003547	NCBP1	99	81.990	ENSMNEG00000042790	NCBP1	99	82.494	Macaca_nemestrina
ENSMALG00000003547	NCBP1	99	81.990	ENSMLEG00000030374	NCBP1	99	82.494	Mandrillus_leucophaeus
ENSMALG00000003547	NCBP1	100	95.723	ENSMAMG00000014806	NCBP1	100	95.723	Mastacembelus_armatus
ENSMALG00000003547	NCBP1	100	95.849	ENSMZEG00005003469	NCBP1	100	95.849	Maylandia_zebra
ENSMALG00000003547	NCBP1	97	93.798	ENSMZEG00005009290	-	100	93.798	Maylandia_zebra
ENSMALG00000003547	NCBP1	99	81.266	ENSMAUG00000020583	Ncbp1	99	81.646	Mesocricetus_auratus
ENSMALG00000003547	NCBP1	99	81.486	ENSMICG00000012682	NCBP1	99	81.990	Microcebus_murinus
ENSMALG00000003547	NCBP1	99	81.612	ENSMOCG00000015818	Ncbp1	99	82.116	Microtus_ochrogaster
ENSMALG00000003547	NCBP1	91	93.759	ENSMMOG00000002610	NCBP1	100	93.759	Mola_mola
ENSMALG00000003547	NCBP1	99	81.612	ENSMODG00000003202	NCBP1	99	81.738	Monodelphis_domestica
ENSMALG00000003547	NCBP1	99	81.864	MGP_CAROLIEiJ_G0025982	Ncbp1	99	82.368	Mus_caroli
ENSMALG00000003547	NCBP1	99	81.864	ENSMUSG00000028330	Ncbp1	99	82.368	Mus_musculus
ENSMALG00000003547	NCBP1	99	81.864	MGP_PahariEiJ_G0028318	Ncbp1	99	82.368	Mus_pahari
ENSMALG00000003547	NCBP1	99	81.864	MGP_SPRETEiJ_G0026945	Ncbp1	99	82.368	Mus_spretus
ENSMALG00000003547	NCBP1	99	82.368	ENSMPUG00000006399	NCBP1	99	82.872	Mustela_putorius_furo
ENSMALG00000003547	NCBP1	98	81.226	ENSMLUG00000015201	NCBP1	99	81.609	Myotis_lucifugus
ENSMALG00000003547	NCBP1	99	82.494	ENSNGAG00000014101	Ncbp1	99	82.494	Nannospalax_galili
ENSMALG00000003547	NCBP1	76	97.797	ENSNBRG00000014674	NCBP1	97	97.797	Neolamprologus_brichardi
ENSMALG00000003547	NCBP1	99	81.990	ENSNLEG00000016909	NCBP1	99	82.494	Nomascus_leucogenys
ENSMALG00000003547	NCBP1	89	81.420	ENSMEUG00000010672	NCBP1	90	81.420	Notamacropus_eugenii
ENSMALG00000003547	NCBP1	84	73.906	ENSOPRG00000002144	-	88	74.579	Ochotona_princeps
ENSMALG00000003547	NCBP1	99	81.864	ENSODEG00000003232	NCBP1	99	82.368	Octodon_degus
ENSMALG00000003547	NCBP1	100	96.226	ENSONIG00000001502	NCBP1	100	96.226	Oreochromis_niloticus
ENSMALG00000003547	NCBP1	78	84.751	ENSOANG00000001918	NCBP1	100	84.751	Ornithorhynchus_anatinus
ENSMALG00000003547	NCBP1	98	81.667	ENSOCUG00000013853	NCBP1	97	82.179	Oryctolagus_cuniculus
ENSMALG00000003547	NCBP1	100	94.493	ENSORLG00000011008	NCBP1	100	94.493	Oryzias_latipes
ENSMALG00000003547	NCBP1	100	94.493	ENSORLG00020017455	NCBP1	100	94.493	Oryzias_latipes_hni
ENSMALG00000003547	NCBP1	100	94.368	ENSORLG00015012127	NCBP1	100	94.368	Oryzias_latipes_hsok
ENSMALG00000003547	NCBP1	100	94.994	ENSOMEG00000020698	NCBP1	100	94.994	Oryzias_melastigma
ENSMALG00000003547	NCBP1	99	81.910	ENSOGAG00000013888	NCBP1	99	82.412	Otolemur_garnettii
ENSMALG00000003547	NCBP1	99	81.990	ENSOARG00000011233	NCBP1	99	82.494	Ovis_aries
ENSMALG00000003547	NCBP1	99	81.990	ENSPPAG00000026462	NCBP1	99	82.494	Pan_paniscus
ENSMALG00000003547	NCBP1	99	82.242	ENSPPRG00000022574	NCBP1	99	82.746	Panthera_pardus
ENSMALG00000003547	NCBP1	99	82.242	ENSPTIG00000018507	NCBP1	99	82.746	Panthera_tigris_altaica
ENSMALG00000003547	NCBP1	99	81.990	ENSPTRG00000021167	NCBP1	99	82.494	Pan_troglodytes
ENSMALG00000003547	NCBP1	99	81.990	ENSPANG00000025591	NCBP1	99	82.494	Papio_anubis
ENSMALG00000003547	NCBP1	99	87.531	ENSPKIG00000015861	NCBP1	99	87.531	Paramormyrops_kingsleyae
ENSMALG00000003547	NCBP1	64	80.664	ENSPSIG00000009558	NCBP1	99	81.641	Pelodiscus_sinensis
ENSMALG00000003547	NCBP1	100	90.476	ENSPMGG00000020476	NCBP1	100	90.476	Periophthalmus_magnuspinnatus
ENSMALG00000003547	NCBP1	99	81.486	ENSPEMG00000020105	Ncbp1	99	81.990	Peromyscus_maniculatus_bairdii
ENSMALG00000003547	NCBP1	99	68.664	ENSPMAG00000005533	NCBP1	99	68.664	Petromyzon_marinus
ENSMALG00000003547	NCBP1	99	81.612	ENSPCIG00000015800	NCBP1	99	84.581	Phascolarctos_cinereus
ENSMALG00000003547	NCBP1	100	95.244	ENSPFOG00000004158	NCBP1	100	95.244	Poecilia_formosa
ENSMALG00000003547	NCBP1	100	95.603	ENSPLAG00000020002	NCBP1	100	95.603	Poecilia_latipinna
ENSMALG00000003547	NCBP1	100	95.603	ENSPMEG00000019821	NCBP1	100	95.603	Poecilia_mexicana
ENSMALG00000003547	NCBP1	100	95.232	ENSPREG00000006035	NCBP1	100	95.232	Poecilia_reticulata
ENSMALG00000003547	NCBP1	99	81.990	ENSPPYG00000019426	NCBP1	99	82.494	Pongo_abelii
ENSMALG00000003547	NCBP1	90	80.363	ENSPCAG00000009943	NCBP1	90	80.363	Procavia_capensis
ENSMALG00000003547	NCBP1	82	87.500	ENSPCOG00000020024	NCBP1	98	87.500	Propithecus_coquereli
ENSMALG00000003547	NCBP1	99	81.990	ENSPVAG00000005924	NCBP1	99	82.494	Pteropus_vampyrus
ENSMALG00000003547	NCBP1	91	94.861	ENSPNYG00000002140	NCBP1	99	94.861	Pundamilia_nyererei
ENSMALG00000003547	NCBP1	100	89.962	ENSPNAG00000027753	NCBP1	100	89.962	Pygocentrus_nattereri
ENSMALG00000003547	NCBP1	99	81.864	ENSRNOG00000023605	Ncbp1	99	82.368	Rattus_norvegicus
ENSMALG00000003547	NCBP1	99	81.990	ENSRBIG00000043175	NCBP1	99	82.494	Rhinopithecus_bieti
ENSMALG00000003547	NCBP1	99	81.990	ENSRROG00000029767	NCBP1	99	82.494	Rhinopithecus_roxellana
ENSMALG00000003547	NCBP1	99	81.990	ENSSBOG00000019378	NCBP1	98	87.561	Saimiri_boliviensis_boliviensis
ENSMALG00000003547	NCBP1	69	78.824	ENSSHAG00000015882	NCBP1	73	77.481	Sarcophilus_harrisii
ENSMALG00000003547	NCBP1	98	86.590	ENSSFOG00015001872	NCBP1	99	85.768	Scleropages_formosus
ENSMALG00000003547	NCBP1	100	94.843	ENSSMAG00000007463	NCBP1	100	94.843	Scophthalmus_maximus
ENSMALG00000003547	NCBP1	100	95.346	ENSSDUG00000007019	NCBP1	100	96.022	Seriola_dumerili
ENSMALG00000003547	NCBP1	100	96.101	ENSSLDG00000021924	NCBP1	100	96.101	Seriola_lalandi_dorsalis
ENSMALG00000003547	NCBP1	85	71.116	ENSSARG00000007274	NCBP1	86	71.335	Sorex_araneus
ENSMALG00000003547	NCBP1	99	77.708	ENSSPUG00000008609	NCBP1	99	77.834	Sphenodon_punctatus
ENSMALG00000003547	NCBP1	100	97.233	ENSSPAG00000012550	NCBP1	100	97.233	Stegastes_partitus
ENSMALG00000003547	NCBP1	99	82.242	ENSSSCG00000005366	NCBP1	99	82.746	Sus_scrofa
ENSMALG00000003547	NCBP1	99	77.834	ENSTGUG00000001472	NCBP1	99	78.868	Taeniopygia_guttata
ENSMALG00000003547	NCBP1	100	93.711	ENSTRUG00000005287	NCBP1	100	93.711	Takifugu_rubripes
ENSMALG00000003547	NCBP1	99	79.597	ENSTBEG00000004035	NCBP1	99	80.101	Tupaia_belangeri
ENSMALG00000003547	NCBP1	88	85.222	ENSTTRG00000000507	NCBP1	88	85.222	Tursiops_truncatus
ENSMALG00000003547	NCBP1	99	82.116	ENSUAMG00000005471	NCBP1	99	82.620	Ursus_americanus
ENSMALG00000003547	NCBP1	97	80.207	ENSUMAG00000011865	NCBP1	99	82.096	Ursus_maritimus
ENSMALG00000003547	NCBP1	99	78.589	ENSVPAG00000010537	NCBP1	99	79.093	Vicugna_pacos
ENSMALG00000003547	NCBP1	99	82.242	ENSVVUG00000019725	NCBP1	99	82.746	Vulpes_vulpes
ENSMALG00000003547	NCBP1	99	79.219	ENSXETG00000010179	ncbp1	99	79.219	Xenopus_tropicalis
ENSMALG00000003547	NCBP1	100	95.477	ENSXMAG00000018253	NCBP1	100	95.477	Xiphophorus_maculatus