EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000003558 (Gene tree)
Gene ID: 109960215
Gene Symbol: prpf8
Alias: id:ibd1257|ik:tdsubc_2a9|im:7141966|tdsubc_2a9|wu:fb37c02|wu:fb73e06|xx:tdsubc_2a9|zgc:56504
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 16662 bases
Position: chrKV884733.1:1109531-1126192
Accession: 109960215
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000005053	RRM_4	PF10598.9	2.9e-48	1	1
ENSMALP00000005053	U5_2-snRNA_bdg	PF10597.9	1.3e-49	1	1
ENSMALP00000005053	PRO8NT	PF08082.11	2.2e-87	1	1
ENSMALP00000005053	U6-snRNA_bdg	PF10596.9	1.7e-89	1	1
ENSMALP00000005053	PROCN	PF08083.11	1.5e-235	1	1
ENSMALP00000005053	PRP8_domainIV	PF12134.8	4e-130	1	1
ENSMALP00000005053	PROCT	PF08084.11	2.8e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000005171	-	6735	XM_020600144	ENSMALP00000005053	2244 (aa)	XP_020455800	-

Gene Model

Click here to download ENSMALG00000003558's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000003558's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000003558	prpf8	100	97.713	ENSG00000174231	PRPF8	97	97.713	Homo_sapiens
ENSMALG00000003558	prpf8	100	98.628	ENSAPOG00000010079	prpf8	97	98.628	Acanthochromis_polyacanthus
ENSMALG00000003558	prpf8	100	97.713	ENSAMEG00000007940	PRPF8	97	97.713	Ailuropoda_melanoleuca
ENSMALG00000003558	prpf8	100	96.157	ENSACIG00000018280	prpf8	97	96.157	Amphilophus_citrinellus
ENSMALG00000003558	prpf8	100	98.628	ENSAOCG00000010725	prpf8	97	98.628	Amphiprion_ocellaris
ENSMALG00000003558	prpf8	100	98.628	ENSAPEG00000014397	prpf8	97	98.628	Amphiprion_percula
ENSMALG00000003558	prpf8	100	97.347	ENSATEG00000010062	prpf8	97	97.347	Anabas_testudineus
ENSMALG00000003558	prpf8	96	97.621	ENSAPLG00000010357	PRPF8	97	97.621	Anas_platyrhynchos
ENSMALG00000003558	prpf8	82	94.332	ENSACAG00000014784	PRPF8	96	94.332	Anolis_carolinensis
ENSMALG00000003558	prpf8	100	97.713	ENSANAG00000032629	PRPF8	97	97.713	Aotus_nancymaae
ENSMALG00000003558	prpf8	100	98.445	ENSACLG00000020858	prpf8	97	98.445	Astatotilapia_calliptera
ENSMALG00000003558	prpf8	100	98.353	ENSAMXG00000020291	prpf8	97	98.353	Astyanax_mexicanus
ENSMALG00000003558	prpf8	100	97.713	ENSBTAG00000011488	PRPF8	97	97.713	Bos_taurus
ENSMALG00000003558	prpf8	99	86.758	WBGene00004187	prp-8	96	86.758	Caenorhabditis_elegans
ENSMALG00000003558	prpf8	100	97.713	ENSCJAG00000001911	PRPF8	97	97.713	Callithrix_jacchus
ENSMALG00000003558	prpf8	100	97.713	ENSCAFG00000019221	PRPF8	97	97.713	Canis_familiaris
ENSMALG00000003558	prpf8	96	97.713	ENSCAFG00020009943	PRPF8	97	97.713	Canis_lupus_dingo
ENSMALG00000003558	prpf8	100	97.713	ENSCHIG00000017499	PRPF8	97	97.713	Capra_hircus
ENSMALG00000003558	prpf8	100	97.713	ENSTSYG00000014120	PRPF8	97	97.713	Carlito_syrichta
ENSMALG00000003558	prpf8	96	94.872	ENSCAPG00000009459	PRPF8	96	94.872	Cavia_aperea
ENSMALG00000003558	prpf8	100	97.713	ENSCPOG00000010379	PRPF8	97	97.713	Cavia_porcellus
ENSMALG00000003558	prpf8	100	97.713	ENSCCAG00000031983	-	97	97.713	Cebus_capucinus
ENSMALG00000003558	prpf8	100	97.713	ENSCATG00000038595	PRPF8	97	97.713	Cercocebus_atys
ENSMALG00000003558	prpf8	100	97.713	ENSCLAG00000004388	PRPF8	97	97.713	Chinchilla_lanigera
ENSMALG00000003558	prpf8	100	97.713	ENSCSAG00000013929	PRPF8	97	97.713	Chlorocebus_sabaeus
ENSMALG00000003558	prpf8	80	96.667	ENSCHOG00000008590	PRPF8	85	96.667	Choloepus_hoffmanni
ENSMALG00000003558	prpf8	100	97.621	ENSCPBG00000020409	PRPF8	97	97.621	Chrysemys_picta_bellii
ENSMALG00000003558	prpf8	98	93.325	ENSCSAVG00000007825	-	98	92.495	Ciona_savignyi
ENSMALG00000003558	prpf8	100	97.713	ENSCANG00000043088	PRPF8	97	97.713	Colobus_angolensis_palliatus
ENSMALG00000003558	prpf8	74	93.458	ENSCGRG00000005129	Prpf8	100	93.458	Cricetulus_griseus_crigri
ENSMALG00000003558	prpf8	100	98.353	ENSCSEG00000007905	prpf8	97	98.353	Cynoglossus_semilaevis
ENSMALG00000003558	prpf8	100	98.262	ENSDARG00000026180	prpf8	97	98.262	Danio_rerio
ENSMALG00000003558	prpf8	93	98.172	ENSDNOG00000018471	PRPF8	96	98.172	Dasypus_novemcinctus
ENSMALG00000003558	prpf8	83	93.546	ENSDORG00000006185	Prpf8	92	93.378	Dipodomys_ordii
ENSMALG00000003558	prpf8	99	92.687	FBgn0033688	Prp8	92	92.687	Drosophila_melanogaster
ENSMALG00000003558	prpf8	100	91.034	ENSETEG00000017592	PRPF8	97	91.034	Echinops_telfairi
ENSMALG00000003558	prpf8	98	95.517	ENSEBUG00000006548	prpf8	96	95.517	Eptatretus_burgeri
ENSMALG00000003558	prpf8	100	97.713	ENSEASG00005009514	PRPF8	97	97.713	Equus_asinus_asinus
ENSMALG00000003558	prpf8	97	97.713	ENSECAG00000021318	PRPF8	97	97.713	Equus_caballus
ENSMALG00000003558	prpf8	66	98.519	ENSEEUG00000012120	-	64	98.519	Erinaceus_europaeus
ENSMALG00000003558	prpf8	98	96.203	ENSELUG00000007120	prpf8	96	96.203	Esox_lucius
ENSMALG00000003558	prpf8	100	97.713	ENSFCAG00000006297	PRPF8	97	97.713	Felis_catus
ENSMALG00000003558	prpf8	100	97.621	ENSFALG00000006628	PRPF8	97	97.621	Ficedula_albicollis
ENSMALG00000003558	prpf8	100	97.713	ENSFDAG00000004711	PRPF8	97	97.713	Fukomys_damarensis
ENSMALG00000003558	prpf8	100	98.536	ENSFHEG00000021084	prpf8	97	98.536	Fundulus_heteroclitus
ENSMALG00000003558	prpf8	100	96.034	ENSGMOG00000002028	prpf8	97	96.034	Gadus_morhua
ENSMALG00000003558	prpf8	100	97.621	ENSGALG00000002943	PRPF8	97	97.621	Gallus_gallus
ENSMALG00000003558	prpf8	99	98.536	ENSGAFG00000010337	prpf8	97	98.536	Gambusia_affinis
ENSMALG00000003558	prpf8	100	98.536	ENSGACG00000008504	prpf8	97	98.536	Gasterosteus_aculeatus
ENSMALG00000003558	prpf8	100	97.621	ENSGAGG00000008350	PRPF8	97	97.621	Gopherus_agassizii
ENSMALG00000003558	prpf8	100	97.713	ENSGGOG00000005516	PRPF8	97	97.713	Gorilla_gorilla
ENSMALG00000003558	prpf8	100	98.445	ENSHBUG00000016192	prpf8	97	98.445	Haplochromis_burtoni
ENSMALG00000003558	prpf8	100	97.713	ENSHGLG00000012029	PRPF8	97	97.713	Heterocephalus_glaber_female
ENSMALG00000003558	prpf8	100	97.713	ENSHGLG00100016494	PRPF8	97	97.713	Heterocephalus_glaber_male
ENSMALG00000003558	prpf8	100	98.445	ENSHCOG00000016414	prpf8	97	98.445	Hippocampus_comes
ENSMALG00000003558	prpf8	100	98.170	ENSIPUG00000023230	prpf8	97	98.170	Ictalurus_punctatus
ENSMALG00000003558	prpf8	100	97.713	ENSSTOG00000005128	PRPF8	97	97.713	Ictidomys_tridecemlineatus
ENSMALG00000003558	prpf8	100	94.177	ENSJJAG00000021159	Prpf8	97	94.177	Jaculus_jaculus
ENSMALG00000003558	prpf8	99	98.536	ENSKMAG00000016118	prpf8	97	98.536	Kryptolebias_marmoratus
ENSMALG00000003558	prpf8	100	98.353	ENSLBEG00000026903	prpf8	97	98.353	Labrus_bergylta
ENSMALG00000003558	prpf8	95	97.842	ENSLACG00000010479	PRPF8	97	98.049	Latimeria_chalumnae
ENSMALG00000003558	prpf8	99	98.172	ENSLOCG00000005409	prpf8	97	98.172	Lepisosteus_oculatus
ENSMALG00000003558	prpf8	100	97.713	ENSLAFG00000015445	PRPF8	97	97.713	Loxodonta_africana
ENSMALG00000003558	prpf8	100	97.713	ENSMFAG00000039995	PRPF8	97	97.713	Macaca_fascicularis
ENSMALG00000003558	prpf8	100	97.713	ENSMMUG00000004820	PRPF8	97	97.713	Macaca_mulatta
ENSMALG00000003558	prpf8	100	97.713	ENSMNEG00000035713	PRPF8	97	97.713	Macaca_nemestrina
ENSMALG00000003558	prpf8	100	97.713	ENSMLEG00000037937	PRPF8	97	97.713	Mandrillus_leucophaeus
ENSMALG00000003558	prpf8	100	98.719	ENSMAMG00000008919	prpf8	97	98.719	Mastacembelus_armatus
ENSMALG00000003558	prpf8	100	98.445	ENSMZEG00005015073	prpf8	97	98.445	Maylandia_zebra
ENSMALG00000003558	prpf8	100	97.621	ENSMGAG00000004769	PRPF8	97	97.621	Meleagris_gallopavo
ENSMALG00000003558	prpf8	100	97.713	ENSMICG00000010320	PRPF8	99	95.950	Microcebus_murinus
ENSMALG00000003558	prpf8	100	97.713	ENSMOCG00000016838	Prpf8	97	97.713	Microtus_ochrogaster
ENSMALG00000003558	prpf8	100	98.536	ENSMMOG00000011887	prpf8	97	98.536	Mola_mola
ENSMALG00000003558	prpf8	100	97.530	ENSMODG00000010480	PRPF8	97	97.530	Monodelphis_domestica
ENSMALG00000003558	prpf8	100	97.621	MGP_CAROLIEiJ_G0016740	Prpf8	97	97.621	Mus_caroli
ENSMALG00000003558	prpf8	100	97.621	ENSMUSG00000020850	Prpf8	97	97.621	Mus_musculus
ENSMALG00000003558	prpf8	100	97.621	MGP_PahariEiJ_G0017877	Prpf8	97	97.621	Mus_pahari
ENSMALG00000003558	prpf8	100	97.621	MGP_SPRETEiJ_G0017583	Prpf8	97	97.621	Mus_spretus
ENSMALG00000003558	prpf8	100	97.713	ENSMPUG00000013227	PRPF8	97	97.713	Mustela_putorius_furo
ENSMALG00000003558	prpf8	100	97.536	ENSMLUG00000002666	PRPF8	97	97.536	Myotis_lucifugus
ENSMALG00000003558	prpf8	100	94.177	ENSNGAG00000005305	Prpf8	97	94.177	Nannospalax_galili
ENSMALG00000003558	prpf8	100	98.445	ENSNBRG00000013127	prpf8	97	98.445	Neolamprologus_brichardi
ENSMALG00000003558	prpf8	97	96.975	ENSNLEG00000000897	PRPF8	95	96.975	Nomascus_leucogenys
ENSMALG00000003558	prpf8	98	96.706	ENSMEUG00000015999	PRPF8	97	96.706	Notamacropus_eugenii
ENSMALG00000003558	prpf8	100	97.713	ENSOPRG00000003102	PRPF8	97	97.713	Ochotona_princeps
ENSMALG00000003558	prpf8	100	97.713	ENSODEG00000008468	PRPF8	97	97.713	Octodon_degus
ENSMALG00000003558	prpf8	100	98.445	ENSONIG00000008153	prpf8	97	98.445	Oreochromis_niloticus
ENSMALG00000003558	prpf8	85	98.970	ENSOANG00000004250	PRPF8	97	98.970	Ornithorhynchus_anatinus
ENSMALG00000003558	prpf8	100	97.713	ENSOCUG00000000081	PRPF8	97	97.713	Oryctolagus_cuniculus
ENSMALG00000003558	prpf8	100	98.536	ENSORLG00000008036	prpf8	97	98.536	Oryzias_latipes
ENSMALG00000003558	prpf8	100	98.446	ENSORLG00020021070	prpf8	97	98.446	Oryzias_latipes_hni
ENSMALG00000003558	prpf8	100	98.536	ENSORLG00015002340	prpf8	97	98.536	Oryzias_latipes_hsok
ENSMALG00000003558	prpf8	100	95.087	ENSOMEG00000016866	prpf8	97	95.087	Oryzias_melastigma
ENSMALG00000003558	prpf8	100	97.713	ENSOARG00000013312	PRPF8	97	97.713	Ovis_aries
ENSMALG00000003558	prpf8	100	97.713	ENSPPAG00000042753	PRPF8	97	97.713	Pan_paniscus
ENSMALG00000003558	prpf8	100	97.713	ENSPPRG00000008746	PRPF8	97	97.713	Panthera_pardus
ENSMALG00000003558	prpf8	100	97.713	ENSPTIG00000019200	PRPF8	97	97.713	Panthera_tigris_altaica
ENSMALG00000003558	prpf8	100	97.713	ENSPTRG00000039576	PRPF8	97	97.713	Pan_troglodytes
ENSMALG00000003558	prpf8	98	97.713	ENSPANG00000024607	PRPF8	96	97.713	Papio_anubis
ENSMALG00000003558	prpf8	100	98.170	ENSPKIG00000011201	prpf8	97	98.170	Paramormyrops_kingsleyae
ENSMALG00000003558	prpf8	100	97.621	ENSPSIG00000013393	PRPF8	97	97.621	Pelodiscus_sinensis
ENSMALG00000003558	prpf8	100	97.713	ENSPEMG00000021699	Prpf8	97	97.713	Peromyscus_maniculatus_bairdii
ENSMALG00000003558	prpf8	96	95.334	ENSPMAG00000005438	prpf8	97	95.334	Petromyzon_marinus
ENSMALG00000003558	prpf8	100	97.530	ENSPCIG00000022603	PRPF8	97	97.530	Phascolarctos_cinereus
ENSMALG00000003558	prpf8	100	98.536	ENSPFOG00000007005	prpf8	97	98.536	Poecilia_formosa
ENSMALG00000003558	prpf8	100	98.536	ENSPLAG00000020777	prpf8	97	98.536	Poecilia_latipinna
ENSMALG00000003558	prpf8	100	98.536	ENSPMEG00000004051	prpf8	97	98.536	Poecilia_mexicana
ENSMALG00000003558	prpf8	100	98.445	ENSPREG00000021902	prpf8	97	98.445	Poecilia_reticulata
ENSMALG00000003558	prpf8	100	97.713	ENSPPYG00000007777	PRPF8	97	97.713	Pongo_abelii
ENSMALG00000003558	prpf8	90	96.287	ENSPCAG00000008938	PRPF8	87	96.287	Procavia_capensis
ENSMALG00000003558	prpf8	100	97.713	ENSPCOG00000015182	PRPF8	97	97.713	Propithecus_coquereli
ENSMALG00000003558	prpf8	93	97.414	ENSPVAG00000002134	PRPF8	90	97.414	Pteropus_vampyrus
ENSMALG00000003558	prpf8	100	98.445	ENSPNYG00000016356	prpf8	97	98.445	Pundamilia_nyererei
ENSMALG00000003558	prpf8	100	98.262	ENSPNAG00000009247	prpf8	97	98.262	Pygocentrus_nattereri
ENSMALG00000003558	prpf8	100	97.621	ENSRNOG00000003495	Prpf8	97	97.621	Rattus_norvegicus
ENSMALG00000003558	prpf8	100	97.713	ENSRBIG00000031219	PRPF8	97	97.713	Rhinopithecus_bieti
ENSMALG00000003558	prpf8	100	97.713	ENSRROG00000038014	PRPF8	97	97.713	Rhinopithecus_roxellana
ENSMALG00000003558	prpf8	99	62.612	YHR165C	PRP8	93	62.612	Saccharomyces_cerevisiae
ENSMALG00000003558	prpf8	100	97.713	ENSSBOG00000029717	PRPF8	97	97.713	Saimiri_boliviensis_boliviensis
ENSMALG00000003558	prpf8	100	97.438	ENSSHAG00000006167	PRPF8	97	97.438	Sarcophilus_harrisii
ENSMALG00000003558	prpf8	100	98.628	ENSSFOG00015013905	prpf8	97	98.628	Scleropages_formosus
ENSMALG00000003558	prpf8	100	98.445	ENSSMAG00000017736	prpf8	98	98.445	Scophthalmus_maximus
ENSMALG00000003558	prpf8	100	98.628	ENSSDUG00000003029	prpf8	97	98.628	Seriola_dumerili
ENSMALG00000003558	prpf8	67	100.000	ENSSLDG00000017096	prpf8	94	100.000	Seriola_lalandi_dorsalis
ENSMALG00000003558	prpf8	87	94.277	ENSSARG00000002892	PRPF8	84	94.277	Sorex_araneus
ENSMALG00000003558	prpf8	100	97.621	ENSSPUG00000007463	PRPF8	97	97.621	Sphenodon_punctatus
ENSMALG00000003558	prpf8	100	98.628	ENSSPAG00000015639	prpf8	97	98.628	Stegastes_partitus
ENSMALG00000003558	prpf8	100	97.713	ENSSSCG00000017817	PRPF8	97	97.713	Sus_scrofa
ENSMALG00000003558	prpf8	50	95.893	ENSTGUG00000015597	-	89	95.893	Taeniopygia_guttata
ENSMALG00000003558	prpf8	100	97.621	ENSTGUG00000005648	-	97	97.621	Taeniopygia_guttata
ENSMALG00000003558	prpf8	100	98.262	ENSTRUG00000015906	prpf8	97	98.262	Takifugu_rubripes
ENSMALG00000003558	prpf8	94	98.353	ENSTNIG00000003460	prpf8	96	98.353	Tetraodon_nigroviridis
ENSMALG00000003558	prpf8	92	97.808	ENSTBEG00000006431	PRPF8	90	97.808	Tupaia_belangeri
ENSMALG00000003558	prpf8	100	96.615	ENSTTRG00000006869	PRPF8	97	96.615	Tursiops_truncatus
ENSMALG00000003558	prpf8	53	94.177	ENSUAMG00000015644	-	89	94.177	Ursus_americanus
ENSMALG00000003558	prpf8	100	97.713	ENSUMAG00000009385	PRPF8	97	97.713	Ursus_maritimus
ENSMALG00000003558	prpf8	74	97.931	ENSVPAG00000006063	-	71	97.931	Vicugna_pacos
ENSMALG00000003558	prpf8	100	97.713	ENSVVUG00000021695	PRPF8	96	97.713	Vulpes_vulpes
ENSMALG00000003558	prpf8	100	97.166	ENSXETG00000022259	prpf8	97	97.166	Xenopus_tropicalis
ENSMALG00000003558	prpf8	100	98.536	ENSXCOG00000012775	prpf8	97	98.536	Xiphophorus_couchianus
ENSMALG00000003558	prpf8	100	98.445	ENSXMAG00000008505	prpf8	97	98.445	Xiphophorus_maculatus