EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000003638 (Gene tree)
Gene ID: 109962451
Gene Symbol: larp1b
Alias: fc76b04|wu:fc76b04
Full Name: la-related protein 1B-like
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 25659 bases
Position: chrKV884752.1:1535241-1560899
Accession: 109962451
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000005075	La	PF05383.17	7.2e-21	1	1
ENSMALP00000005049	La	PF05383.17	7.3e-21	1	1
ENSMALP00000005026	La	PF05383.17	7.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000005144	-	3216	XM_020604161	ENSMALP00000005026	1071 (aa)	XP_020459817	-
ENSMALT00000005193	-	3045	-	ENSMALP00000005075	1014 (aa)	-	-
ENSMALT00000005167	-	3159	XM_020604165	ENSMALP00000005049	1052 (aa)	XP_020459821	-

Gene Model

Click here to download ENSMALG00000003638's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000003638's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000003638	larp1b	93	53.167	ENSMALG00000017180	larp1	93	54.740

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000003638	larp1b	89	55.035	ENSG00000138709	LARP1B	99	55.626	Homo_sapiens
ENSMALG00000003638	larp1b	100	84.375	ENSAPOG00000020101	larp1b	100	84.375	Acanthochromis_polyacanthus
ENSMALG00000003638	larp1b	53	53.541	ENSAMEG00000002748	LARP1B	99	52.595	Ailuropoda_melanoleuca
ENSMALG00000003638	larp1b	100	79.034	ENSACIG00000023890	larp1b	100	79.227	Amphilophus_citrinellus
ENSMALG00000003638	larp1b	90	79.203	ENSAOCG00000014268	larp1b	99	79.418	Amphiprion_ocellaris
ENSMALG00000003638	larp1b	100	83.883	ENSAPEG00000004126	larp1b	100	83.786	Amphiprion_percula
ENSMALG00000003638	larp1b	100	86.927	ENSATEG00000017849	larp1b	100	86.927	Anabas_testudineus
ENSMALG00000003638	larp1b	83	53.733	ENSAPLG00000010129	LARP1B	99	53.972	Anas_platyrhynchos
ENSMALG00000003638	larp1b	85	56.947	ENSACAG00000011338	LARP1B	98	54.434	Anolis_carolinensis
ENSMALG00000003638	larp1b	64	54.494	ENSANAG00000034618	LARP1B	83	53.879	Aotus_nancymaae
ENSMALG00000003638	larp1b	100	80.900	ENSACLG00000011948	larp1b	100	81.084	Astatotilapia_calliptera
ENSMALG00000003638	larp1b	94	56.944	ENSAMXG00000006805	larp1b	92	60.671	Astyanax_mexicanus
ENSMALG00000003638	larp1b	87	56.553	ENSBTAG00000012135	LARP1B	99	49.023	Bos_taurus
ENSMALG00000003638	larp1b	83	57.016	ENSCJAG00000003338	LARP1B	99	57.241	Callithrix_jacchus
ENSMALG00000003638	larp1b	87	57.447	ENSCAFG00000003831	LARP1B	99	59.719	Canis_familiaris
ENSMALG00000003638	larp1b	87	57.219	ENSCAFG00020018899	LARP1B	98	56.992	Canis_lupus_dingo
ENSMALG00000003638	larp1b	85	56.064	ENSCHIG00000023144	LARP1B	98	55.451	Capra_hircus
ENSMALG00000003638	larp1b	84	56.649	ENSCCAG00000021948	LARP1B	99	56.157	Cebus_capucinus
ENSMALG00000003638	larp1b	84	55.940	ENSCATG00000013541	LARP1B	99	55.367	Cercocebus_atys
ENSMALG00000003638	larp1b	84	56.620	ENSCSAG00000003582	LARP1B	99	56.522	Chlorocebus_sabaeus
ENSMALG00000003638	larp1b	85	52.872	ENSCHOG00000005354	LARP1B	100	52.609	Choloepus_hoffmanni
ENSMALG00000003638	larp1b	87	56.782	ENSCPBG00000017480	LARP1B	89	56.813	Chrysemys_picta_bellii
ENSMALG00000003638	larp1b	84	57.714	ENSCANG00000026958	LARP1B	99	57.016	Colobus_angolensis_palliatus
ENSMALG00000003638	larp1b	100	76.825	ENSCSEG00000013519	larp1b	100	76.916	Cynoglossus_semilaevis
ENSMALG00000003638	larp1b	100	76.221	ENSCVAG00000005046	larp1b	100	76.406	Cyprinodon_variegatus
ENSMALG00000003638	larp1b	99	62.621	ENSDARG00000061169	larp1b	93	64.078	Danio_rerio
ENSMALG00000003638	larp1b	74	55.376	ENSETEG00000012497	LARP1B	73	55.376	Echinops_telfairi
ENSMALG00000003638	larp1b	85	45.854	ENSEBUG00000003668	larp1b	93	45.720	Eptatretus_burgeri
ENSMALG00000003638	larp1b	82	57.860	ENSEASG00005018106	LARP1B	99	55.168	Equus_asinus_asinus
ENSMALG00000003638	larp1b	87	56.360	ENSECAG00000001088	LARP1B	84	55.624	Equus_caballus
ENSMALG00000003638	larp1b	88	52.948	ENSELUG00000023774	larp1b	99	58.838	Esox_lucius
ENSMALG00000003638	larp1b	52	51.449	ENSFCAG00000014650	-	99	50.995	Felis_catus
ENSMALG00000003638	larp1b	86	54.180	ENSFALG00000008098	LARP1B	99	53.646	Ficedula_albicollis
ENSMALG00000003638	larp1b	100	79.284	ENSFHEG00000010264	larp1b	97	79.284	Fundulus_heteroclitus
ENSMALG00000003638	larp1b	88	70.066	ENSGMOG00000005207	larp1b	88	70.395	Gadus_morhua
ENSMALG00000003638	larp1b	90	53.460	ENSGALG00000010207	LARP1B	94	53.128	Gallus_gallus
ENSMALG00000003638	larp1b	88	81.217	ENSGAFG00000012012	larp1b	99	80.708	Gambusia_affinis
ENSMALG00000003638	larp1b	100	70.630	ENSGACG00000004609	larp1b	100	71.695	Gasterosteus_aculeatus
ENSMALG00000003638	larp1b	88	56.531	ENSGAGG00000017209	LARP1B	89	57.113	Gopherus_agassizii
ENSMALG00000003638	larp1b	84	56.311	ENSGGOG00000015900	LARP1B	99	55.626	Gorilla_gorilla
ENSMALG00000003638	larp1b	100	81.942	ENSHBUG00000009730	larp1b	100	82.136	Haplochromis_burtoni
ENSMALG00000003638	larp1b	70	77.159	ENSHCOG00000000918	larp1b	99	77.374	Hippocampus_comes
ENSMALG00000003638	larp1b	93	65.155	ENSIPUG00000012138	larp1b	90	65.253	Ictalurus_punctatus
ENSMALG00000003638	larp1b	99	78.107	ENSKMAG00000011589	larp1b	99	78.698	Kryptolebias_marmoratus
ENSMALG00000003638	larp1b	100	81.535	ENSLBEG00000005655	larp1b	100	82.021	Labrus_bergylta
ENSMALG00000003638	larp1b	93	58.513	ENSLACG00000015247	LARP1B	91	58.806	Latimeria_chalumnae
ENSMALG00000003638	larp1b	89	64.619	ENSLOCG00000010684	larp1b	98	60.059	Lepisosteus_oculatus
ENSMALG00000003638	larp1b	84	57.127	ENSMFAG00000002218	LARP1B	99	56.429	Macaca_fascicularis
ENSMALG00000003638	larp1b	84	57.127	ENSMMUG00000021347	LARP1B	99	56.429	Macaca_mulatta
ENSMALG00000003638	larp1b	84	53.628	ENSMNEG00000030406	LARP1B	84	61.756	Macaca_nemestrina
ENSMALG00000003638	larp1b	84	57.253	ENSMLEG00000009306	LARP1B	99	56.670	Mandrillus_leucophaeus
ENSMALG00000003638	larp1b	99	88.977	ENSMAMG00000000081	larp1b	99	88.977	Mastacembelus_armatus
ENSMALG00000003638	larp1b	77	82.949	ENSMZEG00005002545	larp1b	100	82.759	Maylandia_zebra
ENSMALG00000003638	larp1b	82	50.697	ENSMGAG00000004809	LARP1B	100	51.071	Meleagris_gallopavo
ENSMALG00000003638	larp1b	50	41.155	ENSMICG00000028052	-	99	39.665	Microcebus_murinus
ENSMALG00000003638	larp1b	85	58.288	ENSMICG00000036111	LARP1B	100	57.553	Microcebus_murinus
ENSMALG00000003638	larp1b	89	55.029	ENSMODG00000012300	LARP1B	90	54.218	Monodelphis_domestica
ENSMALG00000003638	larp1b	87	57.218	ENSMPUG00000017365	LARP1B	88	54.960	Mustela_putorius_furo
ENSMALG00000003638	larp1b	84	55.920	ENSMLUG00000010229	LARP1B	99	55.450	Myotis_lucifugus
ENSMALG00000003638	larp1b	94	74.079	ENSNBRG00000023846	larp1b	100	76.396	Neolamprologus_brichardi
ENSMALG00000003638	larp1b	84	56.142	ENSNLEG00000013819	LARP1B	99	55.461	Nomascus_leucogenys
ENSMALG00000003638	larp1b	66	59.149	ENSMEUG00000010308	LARP1B	77	59.433	Notamacropus_eugenii
ENSMALG00000003638	larp1b	78	51.163	ENSOPRG00000005478	LARP1B	92	51.395	Ochotona_princeps
ENSMALG00000003638	larp1b	88	80.982	ENSONIG00000012386	larp1b	100	80.061	Oreochromis_niloticus
ENSMALG00000003638	larp1b	85	55.363	ENSOCUG00000013330	LARP1B	98	54.574	Oryctolagus_cuniculus
ENSMALG00000003638	larp1b	92	80.263	ENSORLG00000017954	larp1b	100	74.128	Oryzias_latipes
ENSMALG00000003638	larp1b	98	74.227	ENSORLG00020013081	larp1b	100	73.578	Oryzias_latipes_hni
ENSMALG00000003638	larp1b	93	80.679	ENSORLG00015009580	larp1b	100	74.612	Oryzias_latipes_hsok
ENSMALG00000003638	larp1b	97	78.764	ENSOMEG00000004210	larp1b	100	78.488	Oryzias_melastigma
ENSMALG00000003638	larp1b	83	58.306	ENSOGAG00000005771	LARP1B	100	57.599	Otolemur_garnettii
ENSMALG00000003638	larp1b	86	55.626	ENSOARG00000015300	LARP1B	99	55.567	Ovis_aries
ENSMALG00000003638	larp1b	84	56.526	ENSPPAG00000030439	LARP1B	99	55.732	Pan_paniscus
ENSMALG00000003638	larp1b	52	51.449	ENSPPRG00000002743	-	99	50.995	Panthera_pardus
ENSMALG00000003638	larp1b	52	50.362	ENSPTIG00000011225	LARP1B	99	49.910	Panthera_tigris_altaica
ENSMALG00000003638	larp1b	84	56.742	ENSPTRG00000016437	LARP1B	99	56.051	Pan_troglodytes
ENSMALG00000003638	larp1b	84	57.127	ENSPANG00000012488	LARP1B	99	56.429	Papio_anubis
ENSMALG00000003638	larp1b	83	59.865	ENSPKIG00000014360	larp1b	96	59.097	Paramormyrops_kingsleyae
ENSMALG00000003638	larp1b	87	57.938	ENSPSIG00000012885	LARP1B	99	57.643	Pelodiscus_sinensis
ENSMALG00000003638	larp1b	74	75.697	ENSPMGG00000007207	larp1b	90	74.900	Periophthalmus_magnuspinnatus
ENSMALG00000003638	larp1b	64	54.598	ENSPMAG00000002700	larp1b	99	48.104	Petromyzon_marinus
ENSMALG00000003638	larp1b	77	67.617	ENSPCIG00000026516	LARP1B	96	63.537	Phascolarctos_cinereus
ENSMALG00000003638	larp1b	100	80.633	ENSPFOG00000019519	larp1b	100	77.540	Poecilia_formosa
ENSMALG00000003638	larp1b	61	81.633	ENSPFOG00000022837	-	99	75.902	Poecilia_formosa
ENSMALG00000003638	larp1b	100	83.040	ENSPLAG00000007115	larp1b	100	79.269	Poecilia_latipinna
ENSMALG00000003638	larp1b	100	82.893	ENSPMEG00000001224	larp1b	100	79.981	Poecilia_mexicana
ENSMALG00000003638	larp1b	85	54.575	ENSPCAG00000007546	LARP1B	99	54.277	Procavia_capensis
ENSMALG00000003638	larp1b	76	60.811	ENSPCOG00000021874	LARP1B	99	60.811	Propithecus_coquereli
ENSMALG00000003638	larp1b	83	54.018	ENSPVAG00000005373	LARP1B	97	53.399	Pteropus_vampyrus
ENSMALG00000003638	larp1b	77	81.061	ENSPNYG00000017357	larp1b	100	81.313	Pundamilia_nyererei
ENSMALG00000003638	larp1b	92	63.251	ENSPNAG00000008823	larp1b	89	64.499	Pygocentrus_nattereri
ENSMALG00000003638	larp1b	51	50.817	ENSRBIG00000039982	-	99	49.453	Rhinopithecus_bieti
ENSMALG00000003638	larp1b	84	57.127	ENSRROG00000030771	LARP1B	99	56.429	Rhinopithecus_roxellana
ENSMALG00000003638	larp1b	62	52.199	ENSSHAG00000014474	LARP1B	99	52.211	Sarcophilus_harrisii
ENSMALG00000003638	larp1b	88	83.316	ENSSMAG00000006347	larp1b	97	83.090	Scophthalmus_maximus
ENSMALG00000003638	larp1b	100	85.659	ENSSDUG00000004182	larp1b	100	86.434	Seriola_dumerili
ENSMALG00000003638	larp1b	98	77.327	ENSSLDG00000014613	larp1b	99	82.979	Seriola_lalandi_dorsalis
ENSMALG00000003638	larp1b	82	56.735	ENSSPUG00000011837	LARP1B	95	56.879	Sphenodon_punctatus
ENSMALG00000003638	larp1b	100	82.617	ENSSPAG00000017772	larp1b	100	82.708	Stegastes_partitus
ENSMALG00000003638	larp1b	90	54.663	ENSSSCG00000034280	LARP1B	99	78.409	Sus_scrofa
ENSMALG00000003638	larp1b	71	59.203	ENSTGUG00000002098	-	94	59.548	Taeniopygia_guttata
ENSMALG00000003638	larp1b	99	75.442	ENSTRUG00000005612	larp1b	99	76.719	Takifugu_rubripes
ENSMALG00000003638	larp1b	91	74.573	ENSTNIG00000012398	larp1b	100	77.333	Tetraodon_nigroviridis
ENSMALG00000003638	larp1b	63	52.632	ENSTBEG00000004177	LARP1B	76	51.685	Tupaia_belangeri
ENSMALG00000003638	larp1b	78	55.684	ENSTTRG00000012984	LARP1B	92	55.568	Tursiops_truncatus
ENSMALG00000003638	larp1b	85	57.573	ENSUMAG00000007373	LARP1B	99	56.828	Ursus_maritimus
ENSMALG00000003638	larp1b	86	48.140	ENSVPAG00000007223	LARP1B	79	55.890	Vicugna_pacos
ENSMALG00000003638	larp1b	85	58.760	ENSVVUG00000011307	LARP1B	99	57.637	Vulpes_vulpes
ENSMALG00000003638	larp1b	90	50.523	ENSXETG00000022512	larp1b	94	51.420	Xenopus_tropicalis
ENSMALG00000003638	larp1b	93	71.359	ENSXCOG00000004435	larp1b	95	73.678	Xiphophorus_couchianus
ENSMALG00000003638	larp1b	100	82.080	ENSXMAG00000008150	larp1b	100	78.890	Xiphophorus_maculatus