EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000003712 (Gene tree)
Gene ID: 109965400
Gene Symbol: zgc:101559
Alias: -
Full Name: ras-related protein Rab-33B-like
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 1446 bases
Position: chrKV884787.1:1577152-1578597
Accession: 109965400
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000005145	MMR_HSR1	PF01926.23	3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000005265	-	705	XM_020609372	ENSMALP00000005145	234 (aa)	XP_020465028	UPI0009B42E84

Gene Model

Click here to download ENSMALG00000003712's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb04140	Autophagy - animal	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000003712's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000003712	zgc:101559	85	34.783	ENSMALG00000015854	rab6ba	95	34.783
ENSMALG00000003712	zgc:101559	60	38.562	ENSMALG00000018499	rab34b	57	38.562
ENSMALG00000003712	zgc:101559	69	32.298	ENSMALG00000012930	si:ch73-116o1.2	81	33.526
ENSMALG00000003712	zgc:101559	72	45.833	ENSMALG00000021144	rab1ba	81	45.833
ENSMALG00000003712	zgc:101559	63	42.177	ENSMALG00000005069	rab18b	71	42.177
ENSMALG00000003712	zgc:101559	78	37.912	ENSMALG00000003050	rab11a	84	37.912
ENSMALG00000003712	zgc:101559	84	40.196	ENSMALG00000014727	si:dkey-16l2.16	95	40.196
ENSMALG00000003712	zgc:101559	67	44.025	ENSMALG00000018973	RAB39B	74	44.025
ENSMALG00000003712	zgc:101559	73	36.842	ENSMALG00000022348	-	75	36.842
ENSMALG00000003712	zgc:101559	66	45.161	ENSMALG00000012723	RAB39B	72	45.161
ENSMALG00000003712	zgc:101559	63	40.816	ENSMALG00000009813	rab18a	71	40.816
ENSMALG00000003712	zgc:101559	74	39.884	ENSMALG00000022187	rab11bb	78	39.884
ENSMALG00000003712	zgc:101559	72	46.429	ENSMALG00000012003	rab1ab	80	46.429
ENSMALG00000003712	zgc:101559	94	57.078	ENSMALG00000012630	rab33a	98	55.204
ENSMALG00000003712	zgc:101559	73	38.596	ENSMALG00000014929	rab5aa	77	38.596
ENSMALG00000003712	zgc:101559	78	33.880	ENSMALG00000010781	kras	91	33.696
ENSMALG00000003712	zgc:101559	68	31.288	ENSMALG00000001189	dnajc27	58	31.288
ENSMALG00000003712	zgc:101559	53	39.062	ENSMALG00000018436	RAB29	56	39.062
ENSMALG00000003712	zgc:101559	79	37.968	ENSMALG00000003956	-	85	37.968
ENSMALG00000003712	zgc:101559	84	42.308	ENSMALG00000021129	zgc:171927	96	42.308
ENSMALG00000003712	zgc:101559	84	33.673	ENSMALG00000017417	rab6bb	89	33.673
ENSMALG00000003712	zgc:101559	65	32.026	ENSMALG00000014149	rhebl1	82	32.026
ENSMALG00000003712	zgc:101559	63	33.333	ENSMALG00000005944	rabl2	63	33.333
ENSMALG00000003712	zgc:101559	64	42.953	ENSMALG00000010549	rab41	70	42.953
ENSMALG00000003712	zgc:101559	66	37.736	ENSMALG00000013514	rab38b	71	37.736
ENSMALG00000003712	zgc:101559	85	33.171	ENSMALG00000004053	RAB7A	97	33.171
ENSMALG00000003712	zgc:101559	79	44.565	ENSMALG00000006985	-	82	44.565
ENSMALG00000003712	zgc:101559	73	37.209	ENSMALG00000006052	rab5c	75	37.209
ENSMALG00000003712	zgc:101559	53	35.200	ENSMALG00000015576	-	94	35.971
ENSMALG00000003712	zgc:101559	59	42.446	ENSMALG00000016715	rab34a	52	42.446
ENSMALG00000003712	zgc:101559	65	35.099	ENSMALG00000002136	rab23	71	37.162
ENSMALG00000003712	zgc:101559	64	37.255	ENSMALG00000015936	RAB9A	70	37.255
ENSMALG00000003712	zgc:101559	66	40.909	ENSMALG00000004342	rab2a	72	40.909
ENSMALG00000003712	zgc:101559	65	37.821	ENSMALG00000007664	rab9b	71	37.821
ENSMALG00000003712	zgc:101559	79	32.796	ENSMALG00000011273	hrasb	97	33.333
ENSMALG00000003712	zgc:101559	73	38.953	ENSMALG00000015154	rab25a	82	38.953
ENSMALG00000003712	zgc:101559	63	42.763	ENSMALG00000013152	si:dkey-34d22.5	67	42.763
ENSMALG00000003712	zgc:101559	72	40.351	ENSMALG00000011693	rab22a	84	40.351
ENSMALG00000003712	zgc:101559	77	36.612	ENSMALG00000015762	rab12	74	36.612
ENSMALG00000003712	zgc:101559	63	33.333	ENSMALG00000019758	rras2	72	33.600
ENSMALG00000003712	zgc:101559	71	32.402	ENSMALG00000017553	rasl11a	67	32.402
ENSMALG00000003712	zgc:101559	65	36.420	ENSMALG00000013806	rab36	67	36.420
ENSMALG00000003712	zgc:101559	72	30.178	ENSMALG00000017903	rheb	83	30.178
ENSMALG00000003712	zgc:101559	64	42.282	ENSMALG00000020364	-	71	42.282
ENSMALG00000003712	zgc:101559	84	49.282	ENSMALG00000021944	-	88	68.367
ENSMALG00000003712	zgc:101559	74	38.150	ENSMALG00000021949	rab11ba	78	38.150
ENSMALG00000003712	zgc:101559	85	32.683	ENSMALG00000016312	RAB7A	97	32.683
ENSMALG00000003712	zgc:101559	71	46.108	ENSMALG00000010438	rab30	80	46.108
ENSMALG00000003712	zgc:101559	74	38.728	ENSMALG00000004112	rab25b	82	38.728
ENSMALG00000003712	zgc:101559	77	63.684	ENSMALG00000022693	rab33ba	79	63.684
ENSMALG00000003712	zgc:101559	68	31.098	ENSMALG00000013062	rasl11b	66	31.098
ENSMALG00000003712	zgc:101559	66	35.443	ENSMALG00000012506	rab9a	75	35.443
ENSMALG00000003712	zgc:101559	74	36.994	ENSMALG00000004093	rab11al	79	36.994
ENSMALG00000003712	zgc:101559	73	32.164	ENSMALG00000002696	rras	81	32.164
ENSMALG00000003712	zgc:101559	74	40.571	ENSMALG00000020807	-	85	40.571
ENSMALG00000003712	zgc:101559	62	42.759	ENSMALG00000016038	RAB15	67	42.759
ENSMALG00000003712	zgc:101559	63	42.177	ENSMALG00000021928	rab15	68	42.177

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000003712	zgc:101559	100	82.479	ENSAPOG00000007503	zgc:101559	100	82.479	Acanthochromis_polyacanthus
ENSMALG00000003712	zgc:101559	87	89.655	ENSACIG00000021459	zgc:101559	89	89.655	Amphilophus_citrinellus
ENSMALG00000003712	zgc:101559	100	82.051	ENSAOCG00000024675	zgc:101559	100	82.051	Amphiprion_ocellaris
ENSMALG00000003712	zgc:101559	100	82.051	ENSAPEG00000005176	zgc:101559	100	82.051	Amphiprion_percula
ENSMALG00000003712	zgc:101559	100	85.897	ENSATEG00000007761	zgc:101559	100	85.897	Anabas_testudineus
ENSMALG00000003712	zgc:101559	98	83.478	ENSACLG00000027006	zgc:101559	97	83.478	Astatotilapia_calliptera
ENSMALG00000003712	zgc:101559	99	71.983	ENSAMXG00000040460	zgc:101559	94	71.983	Astyanax_mexicanus
ENSMALG00000003712	zgc:101559	100	79.915	ENSCSEG00000006243	zgc:101559	100	79.915	Cynoglossus_semilaevis
ENSMALG00000003712	zgc:101559	100	82.051	ENSCVAG00000019227	zgc:101559	100	82.051	Cyprinodon_variegatus
ENSMALG00000003712	zgc:101559	100	70.638	ENSDARG00000003257	zgc:101559	100	70.638	Danio_rerio
ENSMALG00000003712	zgc:101559	100	79.060	ENSFHEG00000011483	zgc:101559	100	79.060	Fundulus_heteroclitus
ENSMALG00000003712	zgc:101559	91	79.717	ENSGMOG00000011665	zgc:101559	99	79.717	Gadus_morhua
ENSMALG00000003712	zgc:101559	100	78.632	ENSGAFG00000021202	zgc:101559	100	78.632	Gambusia_affinis
ENSMALG00000003712	zgc:101559	91	79.717	ENSGACG00000001725	zgc:101559	91	79.717	Gasterosteus_aculeatus
ENSMALG00000003712	zgc:101559	100	84.615	ENSHBUG00000007827	zgc:101559	100	84.615	Haplochromis_burtoni
ENSMALG00000003712	zgc:101559	100	74.576	ENSHCOG00000009133	zgc:101559	100	76.050	Hippocampus_comes
ENSMALG00000003712	zgc:101559	88	75.122	ENSIPUG00000022394	zgc:101559	88	75.122	Ictalurus_punctatus
ENSMALG00000003712	zgc:101559	100	77.966	ENSKMAG00000002862	zgc:101559	100	77.966	Kryptolebias_marmoratus
ENSMALG00000003712	zgc:101559	100	83.761	ENSLBEG00000025798	zgc:101559	100	83.761	Labrus_bergylta
ENSMALG00000003712	zgc:101559	86	67.164	ENSLACG00000011557	zgc:101559	87	67.164	Latimeria_chalumnae
ENSMALG00000003712	zgc:101559	88	75.362	ENSLOCG00000005904	zgc:101559	88	75.362	Lepisosteus_oculatus
ENSMALG00000003712	zgc:101559	100	88.034	ENSMAMG00000017431	zgc:101559	100	88.034	Mastacembelus_armatus
ENSMALG00000003712	zgc:101559	100	84.615	ENSMZEG00005021778	zgc:101559	100	84.615	Maylandia_zebra
ENSMALG00000003712	zgc:101559	100	79.060	ENSMMOG00000019779	zgc:101559	100	79.060	Mola_mola
ENSMALG00000003712	zgc:101559	100	84.615	ENSNBRG00000002684	zgc:101559	100	84.615	Neolamprologus_brichardi
ENSMALG00000003712	zgc:101559	100	84.615	ENSONIG00000006715	-	100	84.615	Oreochromis_niloticus
ENSMALG00000003712	zgc:101559	100	79.487	ENSORLG00000030642	zgc:101559	100	79.487	Oryzias_latipes
ENSMALG00000003712	zgc:101559	100	79.060	ENSORLG00020012685	zgc:101559	100	79.060	Oryzias_latipes_hni
ENSMALG00000003712	zgc:101559	100	79.060	ENSORLG00015016047	zgc:101559	100	79.060	Oryzias_latipes_hsok
ENSMALG00000003712	zgc:101559	100	81.624	ENSOMEG00000013128	zgc:101559	100	81.624	Oryzias_melastigma
ENSMALG00000003712	zgc:101559	100	68.803	ENSPKIG00000013397	zgc:101559	98	68.803	Paramormyrops_kingsleyae
ENSMALG00000003712	zgc:101559	100	80.342	ENSPFOG00000009101	-	100	80.342	Poecilia_formosa
ENSMALG00000003712	zgc:101559	100	80.342	ENSPLAG00000020627	zgc:101559	100	80.342	Poecilia_latipinna
ENSMALG00000003712	zgc:101559	100	80.769	ENSPMEG00000010152	zgc:101559	100	80.769	Poecilia_mexicana
ENSMALG00000003712	zgc:101559	100	79.915	ENSPREG00000007017	zgc:101559	100	79.915	Poecilia_reticulata
ENSMALG00000003712	zgc:101559	100	84.615	ENSPNYG00000012922	zgc:101559	100	84.615	Pundamilia_nyererei
ENSMALG00000003712	zgc:101559	100	71.795	ENSPNAG00000017856	zgc:101559	100	71.795	Pygocentrus_nattereri
ENSMALG00000003712	zgc:101559	96	69.643	ENSSFOG00015006175	zgc:101559	96	69.643	Scleropages_formosus
ENSMALG00000003712	zgc:101559	100	80.508	ENSSMAG00000002229	zgc:101559	100	80.508	Scophthalmus_maximus
ENSMALG00000003712	zgc:101559	100	87.607	ENSSDUG00000008151	zgc:101559	100	87.607	Seriola_dumerili
ENSMALG00000003712	zgc:101559	100	87.179	ENSSLDG00000019214	zgc:101559	100	87.179	Seriola_lalandi_dorsalis
ENSMALG00000003712	zgc:101559	100	83.761	ENSSPAG00000006404	zgc:101559	100	83.761	Stegastes_partitus
ENSMALG00000003712	zgc:101559	100	76.923	ENSTRUG00000009903	zgc:101559	100	76.923	Takifugu_rubripes
ENSMALG00000003712	zgc:101559	93	78.802	ENSTNIG00000015000	zgc:101559	92	78.802	Tetraodon_nigroviridis
ENSMALG00000003712	zgc:101559	100	80.342	ENSXCOG00000018683	zgc:101559	100	80.342	Xiphophorus_couchianus
ENSMALG00000003712	zgc:101559	100	80.769	ENSXMAG00000011171	zgc:101559	100	80.769	Xiphophorus_maculatus