EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000003747 (Gene tree)
Gene ID: 109956700
Gene Symbol: srp72
Alias: wu:fi03d11
Full Name: signal recognition particle 72
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 14056 bases
Position: chrKV884709.1:3430403-3444458
Accession: 109956700
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000005231	PPR	PF01535.20	7.6e-07	1	1
ENSMALP00000005351	PPR	PF01535.20	1.2e-05	1	1
ENSMALP00000005200	SRP72	PF08492.12	9.3e-20	1	1
ENSMALP00000005231	SRP72	PF08492.12	1.1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000005471	-	1737	-	ENSMALP00000005351	578 (aa)	-	-
ENSMALT00000005350	-	2130	XM_020594028	ENSMALP00000005231	668 (aa)	XP_020449684	UPI0009B2F079
ENSMALT00000005319	-	2063	XM_020594029	ENSMALP00000005200	604 (aa)	XP_020449685	UPI0009B3BE06

Gene Model

Click here to download ENSMALG00000003747's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000003747's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000003747	srp72	97	76.061	ENSG00000174780	SRP72	99	76.048	Homo_sapiens
ENSMALG00000003747	srp72	99	86.235	ENSAPOG00000019438	srp72	99	87.894	Acanthochromis_polyacanthus
ENSMALG00000003747	srp72	97	76.401	ENSAMEG00000008469	SRP72	99	76.198	Ailuropoda_melanoleuca
ENSMALG00000003747	srp72	100	91.493	ENSACIG00000000488	srp72	100	91.493	Amphilophus_citrinellus
ENSMALG00000003747	srp72	100	91.168	ENSAOCG00000011256	srp72	100	92.665	Amphiprion_ocellaris
ENSMALG00000003747	srp72	100	92.550	ENSAPEG00000001512	srp72	100	92.515	Amphiprion_percula
ENSMALG00000003747	srp72	92	93.333	ENSATEG00000006781	srp72	99	93.333	Anabas_testudineus
ENSMALG00000003747	srp72	100	76.073	ENSAPLG00000008751	SRP72	98	75.831	Anas_platyrhynchos
ENSMALG00000003747	srp72	100	76.364	ENSACAG00000002381	SRP72	98	76.018	Anolis_carolinensis
ENSMALG00000003747	srp72	95	76.145	ENSANAG00000020836	-	100	74.236	Aotus_nancymaae
ENSMALG00000003747	srp72	100	92.550	ENSACLG00000014617	srp72	100	92.216	Astatotilapia_calliptera
ENSMALG00000003747	srp72	98	83.220	ENSAMXG00000004011	srp72	100	82.212	Astyanax_mexicanus
ENSMALG00000003747	srp72	97	75.891	ENSBTAG00000010593	SRP72	99	75.898	Bos_taurus
ENSMALG00000003747	srp72	97	75.552	ENSCJAG00000017998	SRP72	100	75.109	Callithrix_jacchus
ENSMALG00000003747	srp72	97	76.401	ENSCAFG00000002244	SRP72	99	76.347	Canis_familiaris
ENSMALG00000003747	srp72	97	76.401	ENSCAFG00020027338	SRP72	98	77.226	Canis_lupus_dingo
ENSMALG00000003747	srp72	97	74.119	ENSCHIG00000021465	SRP72	99	74.290	Capra_hircus
ENSMALG00000003747	srp72	97	76.740	ENSTSYG00000010571	-	99	76.347	Carlito_syrichta
ENSMALG00000003747	srp72	89	59.665	ENSCAPG00000016668	SRP72	100	75.546	Cavia_aperea
ENSMALG00000003747	srp72	97	76.401	ENSCPOG00000000218	SRP72	99	76.347	Cavia_porcellus
ENSMALG00000003747	srp72	95	76.108	ENSCCAG00000030683	-	100	75.546	Cebus_capucinus
ENSMALG00000003747	srp72	97	74.194	ENSCCAG00000030830	-	99	73.913	Cebus_capucinus
ENSMALG00000003747	srp72	97	76.061	ENSCATG00000008072	SRP72	99	76.048	Cercocebus_atys
ENSMALG00000003747	srp72	96	61.246	ENSCATG00000045359	-	95	60.736	Cercocebus_atys
ENSMALG00000003747	srp72	97	75.891	ENSCLAG00000003571	SRP72	99	75.898	Chinchilla_lanigera
ENSMALG00000003747	srp72	97	71.975	ENSCSAG00000005079	SRP72	99	72.048	Chlorocebus_sabaeus
ENSMALG00000003747	srp72	90	73.684	ENSCHOG00000013240	SRP72	89	73.684	Choloepus_hoffmanni
ENSMALG00000003747	srp72	100	77.190	ENSCPBG00000015015	SRP72	100	76.155	Chrysemys_picta_bellii
ENSMALG00000003747	srp72	94	40.735	ENSCING00000002417	-	98	40.616	Ciona_intestinalis
ENSMALG00000003747	srp72	93	41.331	ENSCSAVG00000011288	-	99	41.410	Ciona_savignyi
ENSMALG00000003747	srp72	99	51.579	ENSCANG00000037920	-	98	52.824	Colobus_angolensis_palliatus
ENSMALG00000003747	srp72	97	76.061	ENSCANG00000041709	SRP72	99	76.048	Colobus_angolensis_palliatus
ENSMALG00000003747	srp72	100	76.364	ENSCGRG00001013548	Srp72	99	76.198	Cricetulus_griseus_chok1gshd
ENSMALG00000003747	srp72	100	76.364	ENSCGRG00000003013	Srp72	99	76.693	Cricetulus_griseus_crigri
ENSMALG00000003747	srp72	100	88.907	ENSCSEG00000003616	srp72	100	89.222	Cynoglossus_semilaevis
ENSMALG00000003747	srp72	91	90.805	ENSCVAG00000001520	srp72	100	90.805	Cyprinodon_variegatus
ENSMALG00000003747	srp72	94	82.807	ENSDARG00000014139	srp72	99	82.828	Danio_rerio
ENSMALG00000003747	srp72	98	71.884	ENSDNOG00000039012	SRP72	83	72.388	Dasypus_novemcinctus
ENSMALG00000003747	srp72	97	76.570	ENSDORG00000000171	Srp72	99	75.898	Dipodomys_ordii
ENSMALG00000003747	srp72	95	40.657	FBgn0038810	Srp72	96	40.062	Drosophila_melanogaster
ENSMALG00000003747	srp72	97	76.570	ENSETEG00000005191	SRP72	99	76.347	Echinops_telfairi
ENSMALG00000003747	srp72	83	62.500	ENSEBUG00000003696	srp72	98	62.992	Eptatretus_burgeri
ENSMALG00000003747	srp72	97	76.231	ENSEASG00005017747	SRP72	99	76.347	Equus_asinus_asinus
ENSMALG00000003747	srp72	97	76.231	ENSECAG00000006920	SRP72	99	76.198	Equus_caballus
ENSMALG00000003747	srp72	100	83.908	ENSELUG00000022415	srp72	100	84.144	Esox_lucius
ENSMALG00000003747	srp72	97	76.235	ENSFCAG00000027600	SRP72	99	76.198	Felis_catus
ENSMALG00000003747	srp72	97	76.949	ENSFALG00000006713	SRP72	99	76.084	Ficedula_albicollis
ENSMALG00000003747	srp72	96	50.263	ENSFDAG00000009793	-	94	49.647	Fukomys_damarensis
ENSMALG00000003747	srp72	97	75.722	ENSFDAG00000002014	-	99	75.449	Fukomys_damarensis
ENSMALG00000003747	srp72	100	89.752	ENSFHEG00000017652	srp72	92	90.583	Fundulus_heteroclitus
ENSMALG00000003747	srp72	98	79.899	ENSGMOG00000005986	srp72	99	79.881	Gadus_morhua
ENSMALG00000003747	srp72	97	77.250	ENSGALG00000011403	SRP72	99	76.621	Gallus_gallus
ENSMALG00000003747	srp72	100	90.284	ENSGAFG00000017762	srp72	100	90.284	Gambusia_affinis
ENSMALG00000003747	srp72	100	91.405	ENSGACG00000016749	srp72	99	91.181	Gasterosteus_aculeatus
ENSMALG00000003747	srp72	98	77.759	ENSGAGG00000024611	SRP72	98	77.572	Gopherus_agassizii
ENSMALG00000003747	srp72	97	75.722	ENSGGOG00000013234	-	99	75.599	Gorilla_gorilla
ENSMALG00000003747	srp72	100	92.384	ENSHBUG00000020723	srp72	100	92.365	Haplochromis_burtoni
ENSMALG00000003747	srp72	97	57.555	ENSHGLG00000003950	-	99	68.000	Heterocephalus_glaber_female
ENSMALG00000003747	srp72	97	70.968	ENSHGLG00000005029	-	99	70.509	Heterocephalus_glaber_female
ENSMALG00000003747	srp72	90	68.421	ENSHGLG00000010633	-	99	69.393	Heterocephalus_glaber_female
ENSMALG00000003747	srp72	56	59.238	ENSHGLG00000003496	-	99	59.195	Heterocephalus_glaber_female
ENSMALG00000003747	srp72	97	75.722	ENSHGLG00000009791	SRP72	99	75.749	Heterocephalus_glaber_female
ENSMALG00000003747	srp72	97	60.307	ENSHGLG00000018597	-	100	60.565	Heterocephalus_glaber_female
ENSMALG00000003747	srp72	97	56.566	ENSHGLG00100009346	-	99	57.049	Heterocephalus_glaber_male
ENSMALG00000003747	srp72	97	70.968	ENSHGLG00100011236	-	99	70.509	Heterocephalus_glaber_male
ENSMALG00000003747	srp72	97	75.722	ENSHGLG00100009021	SRP72	99	75.749	Heterocephalus_glaber_male
ENSMALG00000003747	srp72	97	57.385	ENSHGLG00100017133	-	99	67.556	Heterocephalus_glaber_male
ENSMALG00000003747	srp72	98	89.134	ENSHCOG00000013760	srp72	100	88.623	Hippocampus_comes
ENSMALG00000003747	srp72	100	83.306	ENSIPUG00000000210	srp72	100	83.109	Ictalurus_punctatus
ENSMALG00000003747	srp72	97	76.231	ENSSTOG00000007305	SRP72	99	76.198	Ictidomys_tridecemlineatus
ENSMALG00000003747	srp72	97	76.361	ENSJJAG00000018324	Srp72	99	75.898	Jaculus_jaculus
ENSMALG00000003747	srp72	100	88.640	ENSKMAG00000003776	srp72	100	88.640	Kryptolebias_marmoratus
ENSMALG00000003747	srp72	98	83.220	ENSLOCG00000002628	srp72	98	82.701	Lepisosteus_oculatus
ENSMALG00000003747	srp72	97	76.061	ENSLAFG00000018307	SRP72	99	75.898	Loxodonta_africana
ENSMALG00000003747	srp72	98	75.915	ENSMFAG00000031065	SRP72	99	76.048	Macaca_fascicularis
ENSMALG00000003747	srp72	96	63.322	ENSMFAG00000037164	-	97	61.920	Macaca_fascicularis
ENSMALG00000003747	srp72	94	56.916	ENSMMUG00000021262	-	95	57.006	Macaca_mulatta
ENSMALG00000003747	srp72	98	76.014	ENSMMUG00000016368	SRP72	97	75.878	Macaca_mulatta
ENSMALG00000003747	srp72	98	75.915	ENSMNEG00000038065	-	99	76.048	Macaca_nemestrina
ENSMALG00000003747	srp72	95	75.197	ENSMLEG00000030140	-	94	74.724	Mandrillus_leucophaeus
ENSMALG00000003747	srp72	100	94.040	ENSMAMG00000014989	srp72	88	93.713	Mastacembelus_armatus
ENSMALG00000003747	srp72	100	92.550	ENSMZEG00005003325	srp72	100	92.365	Maylandia_zebra
ENSMALG00000003747	srp72	97	73.005	ENSMGAG00000008567	SRP72	100	76.119	Meleagris_gallopavo
ENSMALG00000003747	srp72	100	76.033	ENSMAUG00000001237	Srp72	99	75.749	Mesocricetus_auratus
ENSMALG00000003747	srp72	95	75.987	ENSMICG00000008507	-	100	72.489	Microcebus_murinus
ENSMALG00000003747	srp72	100	76.033	ENSMOCG00000020309	Srp72	99	75.898	Microtus_ochrogaster
ENSMALG00000003747	srp72	100	90.397	ENSMMOG00000002627	srp72	100	89.970	Mola_mola
ENSMALG00000003747	srp72	97	73.175	ENSMODG00000020697	SRP72	99	72.904	Monodelphis_domestica
ENSMALG00000003747	srp72	100	76.364	MGP_CAROLIEiJ_G0027323	Srp72	99	76.048	Mus_caroli
ENSMALG00000003747	srp72	100	76.364	ENSMUSG00000036323	Srp72	99	76.048	Mus_musculus
ENSMALG00000003747	srp72	100	76.694	MGP_PahariEiJ_G0017103	Srp72	99	76.198	Mus_pahari
ENSMALG00000003747	srp72	100	76.364	MGP_SPRETEiJ_G0028317	Srp72	99	76.048	Mus_spretus
ENSMALG00000003747	srp72	97	76.401	ENSMPUG00000004828	SRP72	99	76.198	Mustela_putorius_furo
ENSMALG00000003747	srp72	97	76.102	ENSMLUG00000007344	SRP72	99	75.785	Myotis_lucifugus
ENSMALG00000003747	srp72	100	76.860	ENSNGAG00000012595	Srp72	99	76.347	Nannospalax_galili
ENSMALG00000003747	srp72	100	88.623	ENSNBRG00000014492	srp72	100	88.174	Neolamprologus_brichardi
ENSMALG00000003747	srp72	97	70.661	ENSNLEG00000008806	-	100	73.799	Nomascus_leucogenys
ENSMALG00000003747	srp72	97	65.365	ENSMEUG00000005164	SRP72	89	75.676	Notamacropus_eugenii
ENSMALG00000003747	srp72	97	75.170	ENSOPRG00000012521	SRP72	99	75.000	Ochotona_princeps
ENSMALG00000003747	srp72	97	76.061	ENSODEG00000012214	SRP72	99	74.251	Octodon_degus
ENSMALG00000003747	srp72	100	92.365	ENSONIG00000001446	srp72	99	92.365	Oreochromis_niloticus
ENSMALG00000003747	srp72	96	65.471	ENSOANG00000008562	SRP72	97	60.574	Ornithorhynchus_anatinus
ENSMALG00000003747	srp72	97	76.190	ENSOCUG00000012226	SRP72	99	76.198	Oryctolagus_cuniculus
ENSMALG00000003747	srp72	100	85.430	ENSORLG00000020418	srp72	99	86.228	Oryzias_latipes
ENSMALG00000003747	srp72	100	84.768	ENSORLG00020009138	srp72	97	85.479	Oryzias_latipes_hni
ENSMALG00000003747	srp72	100	84.934	ENSORLG00015018251	srp72	99	85.778	Oryzias_latipes_hsok
ENSMALG00000003747	srp72	98	85.496	ENSOMEG00000022008	srp72	98	86.343	Oryzias_melastigma
ENSMALG00000003747	srp72	98	76.982	ENSOGAG00000003578	SRP72	99	77.246	Otolemur_garnettii
ENSMALG00000003747	srp72	97	75.722	ENSOARG00000004329	SRP72	99	75.749	Ovis_aries
ENSMALG00000003747	srp72	91	60.656	ENSPPAG00000032490	-	96	59.266	Pan_paniscus
ENSMALG00000003747	srp72	97	76.061	ENSPPAG00000042265	SRP72	99	76.048	Pan_paniscus
ENSMALG00000003747	srp72	99	53.695	ENSPPAG00000011428	-	95	53.951	Pan_paniscus
ENSMALG00000003747	srp72	97	76.231	ENSPPRG00000015991	SRP72	99	76.198	Panthera_pardus
ENSMALG00000003747	srp72	97	76.231	ENSPTIG00000018786	SRP72	99	76.198	Panthera_tigris_altaica
ENSMALG00000003747	srp72	99	55.667	ENSPTRG00000048100	-	95	55.878	Pan_troglodytes
ENSMALG00000003747	srp72	89	61.567	ENSPTRG00000043609	-	96	59.441	Pan_troglodytes
ENSMALG00000003747	srp72	97	76.061	ENSPTRG00000048466	-	99	76.048	Pan_troglodytes
ENSMALG00000003747	srp72	95	60.453	ENSPANG00000030230	-	97	61.182	Papio_anubis
ENSMALG00000003747	srp72	97	76.061	ENSPANG00000005495	SRP72	99	76.048	Papio_anubis
ENSMALG00000003747	srp72	100	76.529	ENSPSIG00000003003	SRP72	100	76.168	Pelodiscus_sinensis
ENSMALG00000003747	srp72	100	76.198	ENSPEMG00000012828	-	99	75.898	Peromyscus_maniculatus_bairdii
ENSMALG00000003747	srp72	97	76.231	ENSPCIG00000000732	SRP72	99	75.749	Phascolarctos_cinereus
ENSMALG00000003747	srp72	100	90.248	ENSPFOG00000003480	srp72	100	90.135	Poecilia_formosa
ENSMALG00000003747	srp72	100	90.248	ENSPLAG00000020122	srp72	100	90.135	Poecilia_latipinna
ENSMALG00000003747	srp72	100	90.413	ENSPMEG00000019988	srp72	100	90.284	Poecilia_mexicana
ENSMALG00000003747	srp72	100	90.083	ENSPREG00000006218	srp72	100	89.985	Poecilia_reticulata
ENSMALG00000003747	srp72	63	63.969	ENSPPYG00000009152	-	97	64.267	Pongo_abelii
ENSMALG00000003747	srp72	97	76.061	ENSPPYG00000014752	-	78	76.048	Pongo_abelii
ENSMALG00000003747	srp72	97	74.873	ENSPVAG00000005590	SRP72	99	75.000	Pteropus_vampyrus
ENSMALG00000003747	srp72	100	92.550	ENSPNYG00000001916	srp72	100	92.515	Pundamilia_nyererei
ENSMALG00000003747	srp72	100	85.124	ENSPNAG00000022424	srp72	100	84.604	Pygocentrus_nattereri
ENSMALG00000003747	srp72	100	74.380	ENSRNOG00000002100	LOC108348180	100	74.236	Rattus_norvegicus
ENSMALG00000003747	srp72	99	59.106	ENSRBIG00000029328	-	97	59.601	Rhinopithecus_bieti
ENSMALG00000003747	srp72	95	76.307	ENSRBIG00000042069	SRP72	99	71.664	Rhinopithecus_bieti
ENSMALG00000003747	srp72	97	76.061	ENSRROG00000035704	SRP72	99	76.048	Rhinopithecus_roxellana
ENSMALG00000003747	srp72	97	76.231	ENSSHAG00000000614	SRP72	95	75.900	Sarcophilus_harrisii
ENSMALG00000003747	srp72	100	82.810	ENSSFOG00015002026	srp72	100	82.212	Scleropages_formosus
ENSMALG00000003747	srp72	100	88.227	ENSSMAG00000007639	srp72	100	89.717	Scophthalmus_maximus
ENSMALG00000003747	srp72	100	94.205	ENSSDUG00000007345	srp72	98	94.012	Seriola_dumerili
ENSMALG00000003747	srp72	100	94.040	ENSSLDG00000021819	srp72	98	93.862	Seriola_lalandi_dorsalis
ENSMALG00000003747	srp72	69	86.486	ENSSARG00000005804	SRP72	65	86.486	Sorex_araneus
ENSMALG00000003747	srp72	97	76.570	ENSSPUG00000009740	SRP72	97	76.336	Sphenodon_punctatus
ENSMALG00000003747	srp72	100	93.543	ENSSPAG00000011565	srp72	100	93.413	Stegastes_partitus
ENSMALG00000003747	srp72	100	74.215	ENSSSCG00000008900	SRP72	99	73.952	Sus_scrofa
ENSMALG00000003747	srp72	97	76.988	ENSTGUG00000004767	SRP72	99	76.006	Taeniopygia_guttata
ENSMALG00000003747	srp72	98	87.136	ENSTRUG00000009831	srp72	100	87.275	Takifugu_rubripes
ENSMALG00000003747	srp72	100	88.907	ENSTNIG00000013073	srp72	99	88.473	Tetraodon_nigroviridis
ENSMALG00000003747	srp72	86	73.469	ENSTBEG00000007394	SRP72	90	66.667	Tupaia_belangeri
ENSMALG00000003747	srp72	97	75.722	ENSTTRG00000010945	SRP72	100	76.220	Tursiops_truncatus
ENSMALG00000003747	srp72	64	76.883	ENSUAMG00000001701	SRP72	100	76.903	Ursus_americanus
ENSMALG00000003747	srp72	97	76.231	ENSUMAG00000008151	SRP72	99	76.048	Ursus_maritimus
ENSMALG00000003747	srp72	98	74.848	ENSVPAG00000000458	SRP72	99	75.000	Vicugna_pacos
ENSMALG00000003747	srp72	97	76.231	ENSVVUG00000006020	SRP72	99	76.198	Vulpes_vulpes
ENSMALG00000003747	srp72	100	73.432	ENSXETG00000010205	srp72	100	73.469	Xenopus_tropicalis
ENSMALG00000003747	srp72	100	90.744	ENSXMAG00000018000	srp72	99	90.419	Xiphophorus_maculatus