EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000003772 (Gene tree)
Gene ID: 109967652
Gene Symbol: trnau1apb
Alias: secp43|trnau1ap|trnau1apl|trspap1|wu:fa56b07|wu:fc12c07|wu:fc69f09|zgc:113964|zgc:77884
Full Name: tRNA selenocysteine 1-associated protein 1-like
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 8597 bases
Position: chrKV884821.1:1340890-1349486
Accession: 109967652
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000005266	RRM_1	PF00076.22	1.5e-30	1	2
ENSMALP00000005266	RRM_1	PF00076.22	1.5e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000005385	-	915	XM_020613388	ENSMALP00000005266	304 (aa)	XP_020469044	-

Gene Model

Click here to download ENSMALG00000003772's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000003772's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000003772	trnau1apb	94	45.246	ENSMALG00000016778	trnau1apa	93	43.581
ENSMALG00000003772	trnau1apb	56	31.034	ENSMALG00000016924	-	72	31.034

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000003772	trnau1apb	100	84.039	ENSAPOG00000010086	trnau1apb	99	84.768	Acanthochromis_polyacanthus
ENSMALG00000003772	trnau1apb	100	77.812	ENSACIG00000001863	trnau1apb	100	73.574	Amphilophus_citrinellus
ENSMALG00000003772	trnau1apb	100	75.882	ENSAOCG00000011891	trnau1apb	100	76.176	Amphiprion_ocellaris
ENSMALG00000003772	trnau1apb	100	83.607	ENSAPEG00000008029	trnau1apb	100	83.607	Amphiprion_percula
ENSMALG00000003772	trnau1apb	100	76.765	ENSATEG00000002196	trnau1apb	99	77.219	Anabas_testudineus
ENSMALG00000003772	trnau1apb	100	77.607	ENSACLG00000003016	trnau1apb	99	73.591	Astatotilapia_calliptera
ENSMALG00000003772	trnau1apb	99	64.952	ENSAMXG00000001805	trnau1apb	99	62.342	Astyanax_mexicanus
ENSMALG00000003772	trnau1apb	99	70.882	ENSCSEG00000018215	trnau1apb	100	72.353	Cynoglossus_semilaevis
ENSMALG00000003772	trnau1apb	95	66.163	ENSCVAG00000017866	trnau1apb	100	69.632	Cyprinodon_variegatus
ENSMALG00000003772	trnau1apb	99	63.987	ENSDARG00000056475	trnau1apb	98	61.270	Danio_rerio
ENSMALG00000003772	trnau1apb	60	82.609	ENSELUG00000016683	trnau1apb	55	84.358	Esox_lucius
ENSMALG00000003772	trnau1apb	100	71.720	ENSFHEG00000001267	trnau1apb	99	71.720	Fundulus_heteroclitus
ENSMALG00000003772	trnau1apb	98	62.974	ENSGMOG00000001160	trnau1apb	99	66.061	Gadus_morhua
ENSMALG00000003772	trnau1apb	59	94.944	ENSGAFG00000006770	trnau1apb	99	76.923	Gambusia_affinis
ENSMALG00000003772	trnau1apb	100	71.299	ENSGACG00000014944	trnau1apb	100	71.299	Gasterosteus_aculeatus
ENSMALG00000003772	trnau1apb	68	35.498	ENSGAGG00000022384	-	78	36.058	Gopherus_agassizii
ENSMALG00000003772	trnau1apb	100	75.000	ENSHBUG00000018944	trnau1apb	100	74.267	Haplochromis_burtoni
ENSMALG00000003772	trnau1apb	60	89.011	ENSHCOG00000011350	trnau1apb	57	90.960	Hippocampus_comes
ENSMALG00000003772	trnau1apb	99	62.420	ENSIPUG00000008843	tsp1l	99	61.146	Ictalurus_punctatus
ENSMALG00000003772	trnau1apb	60	93.923	ENSKMAG00000010082	trnau1apb	99	74.336	Kryptolebias_marmoratus
ENSMALG00000003772	trnau1apb	100	73.952	ENSLBEG00000020480	trnau1apb	100	73.952	Labrus_bergylta
ENSMALG00000003772	trnau1apb	99	53.205	ENSLOCG00000013175	trnau1apb	99	51.290	Lepisosteus_oculatus
ENSMALG00000003772	trnau1apb	100	76.627	ENSMAMG00000012192	trnau1apb	100	77.515	Mastacembelus_armatus
ENSMALG00000003772	trnau1apb	100	70.170	ENSMZEG00005014852	trnau1apb	99	74.777	Maylandia_zebra
ENSMALG00000003772	trnau1apb	68	38.967	ENSMGAG00000003234	-	99	37.321	Meleagris_gallopavo
ENSMALG00000003772	trnau1apb	96	64.307	ENSMMOG00000021521	trnau1apb	100	66.077	Mola_mola
ENSMALG00000003772	trnau1apb	97	77.215	ENSNBRG00000000751	trnau1apb	55	98.305	Neolamprologus_brichardi
ENSMALG00000003772	trnau1apb	99	72.785	ENSONIG00000016639	trnau1apb	99	72.168	Oreochromis_niloticus
ENSMALG00000003772	trnau1apb	60	93.956	ENSORLG00000013265	trnau1apb	99	69.883	Oryzias_latipes
ENSMALG00000003772	trnau1apb	100	71.637	ENSORLG00020004464	trnau1apb	99	72.059	Oryzias_latipes_hni
ENSMALG00000003772	trnau1apb	100	71.637	ENSORLG00015021098	trnau1apb	99	72.059	Oryzias_latipes_hsok
ENSMALG00000003772	trnau1apb	60	93.956	ENSOMEG00000016531	trnau1apb	99	72.515	Oryzias_melastigma
ENSMALG00000003772	trnau1apb	98	58.194	ENSPKIG00000007995	trnau1apb	58	82.456	Paramormyrops_kingsleyae
ENSMALG00000003772	trnau1apb	68	41.121	ENSPSIG00000004189	-	78	39.906	Pelodiscus_sinensis
ENSMALG00000003772	trnau1apb	99	69.868	ENSPMGG00000018509	trnau1apb	99	69.868	Periophthalmus_magnuspinnatus
ENSMALG00000003772	trnau1apb	100	75.633	ENSPFOG00000003938	trnau1apb	99	75.796	Poecilia_formosa
ENSMALG00000003772	trnau1apb	100	71.720	ENSPLAG00000015480	trnau1apb	99	72.141	Poecilia_latipinna
ENSMALG00000003772	trnau1apb	100	71.720	ENSPMEG00000012743	trnau1apb	99	72.141	Poecilia_mexicana
ENSMALG00000003772	trnau1apb	100	71.137	ENSPREG00000015035	trnau1apb	99	70.968	Poecilia_reticulata
ENSMALG00000003772	trnau1apb	100	74.847	ENSPNYG00000012127	trnau1apb	99	70.920	Pundamilia_nyererei
ENSMALG00000003772	trnau1apb	99	63.694	ENSPNAG00000019138	trnau1apb	98	61.635	Pygocentrus_nattereri
ENSMALG00000003772	trnau1apb	99	58.055	ENSSFOG00015014158	trnau1apb	99	58.663	Scleropages_formosus
ENSMALG00000003772	trnau1apb	99	70.746	ENSSMAG00000001745	trnau1apb	99	73.134	Scophthalmus_maximus
ENSMALG00000003772	trnau1apb	99	76.036	ENSSDUG00000011109	trnau1apb	99	75.740	Seriola_dumerili
ENSMALG00000003772	trnau1apb	99	76.627	ENSSLDG00000012947	trnau1apb	99	76.036	Seriola_lalandi_dorsalis
ENSMALG00000003772	trnau1apb	100	80.126	ENSSPAG00000006917	trnau1apb	100	80.757	Stegastes_partitus
ENSMALG00000003772	trnau1apb	100	71.609	ENSTRUG00000008608	trnau1apb	99	73.312	Takifugu_rubripes
ENSMALG00000003772	trnau1apb	99	67.742	ENSTNIG00000000916	trnau1apb	99	66.234	Tetraodon_nigroviridis
ENSMALG00000003772	trnau1apb	94	77.972	ENSXCOG00000007974	trnau1apb	94	78.169	Xiphophorus_couchianus
ENSMALG00000003772	trnau1apb	100	72.303	ENSXMAG00000029918	trnau1apb	99	72.434	Xiphophorus_maculatus