EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000004034 (Gene tree)
Gene ID: 109960798
Gene Symbol: gfi1b
Alias: si:ch211-231o6.2
Full Name: growth factor independent 1B transcriptional repressor
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 9273 bases
Position: chrKV884738.1:2382081-2391353
Accession: 109960798
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000005621	zf-C2H2	PF00096.26	7.4e-25	1	5
ENSMALP00000005621	zf-C2H2	PF00096.26	7.4e-25	2	5
ENSMALP00000005621	zf-C2H2	PF00096.26	7.4e-25	3	5
ENSMALP00000005621	zf-C2H2	PF00096.26	7.4e-25	4	5
ENSMALP00000005621	zf-C2H2	PF00096.26	7.4e-25	5	5
ENSMALP00000005621	zf-met	PF12874.7	1.2e-08	1	2
ENSMALP00000005621	zf-met	PF12874.7	1.2e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000005746	-	6167	XM_020601162	ENSMALP00000005621	328 (aa)	XP_020456818	UPI0009B2F7B1

Gene Model

Click here to download ENSMALG00000004034's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000004034's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000004034	gfi1b	60	44.643	ENSMALG00000001487	-	92	44.643
ENSMALG00000004034	gfi1b	81	49.645	ENSMALG00000004984	-	95	49.645
ENSMALG00000004034	gfi1b	63	43.448	ENSMALG00000012155	-	95	40.244
ENSMALG00000004034	gfi1b	50	42.675	ENSMALG00000010700	-	87	42.675
ENSMALG00000004034	gfi1b	58	36.879	ENSMALG00000013321	-	66	36.879
ENSMALG00000004034	gfi1b	51	45.669	ENSMALG00000003975	-	96	41.176
ENSMALG00000004034	gfi1b	54	42.647	ENSMALG00000005901	znf319b	75	42.647
ENSMALG00000004034	gfi1b	51	43.165	ENSMALG00000005203	-	91	43.165
ENSMALG00000004034	gfi1b	77	39.080	ENSMALG00000012056	-	95	40.288
ENSMALG00000004034	gfi1b	56	45.679	ENSMALG00000003588	znf236	52	45.679
ENSMALG00000004034	gfi1b	72	45.000	ENSMALG00000020889	-	97	44.118
ENSMALG00000004034	gfi1b	52	40.179	ENSMALG00000003423	-	96	40.179
ENSMALG00000004034	gfi1b	51	49.123	ENSMALG00000010959	-	88	44.706
ENSMALG00000004034	gfi1b	53	41.892	ENSMALG00000010369	-	74	41.892
ENSMALG00000004034	gfi1b	51	45.181	ENSMALG00000004216	-	62	45.181
ENSMALG00000004034	gfi1b	61	44.944	ENSMALG00000003294	-	99	44.944
ENSMALG00000004034	gfi1b	62	40.854	ENSMALG00000013934	prdm5	73	40.854
ENSMALG00000004034	gfi1b	63	44.643	ENSMALG00000005239	-	90	47.899
ENSMALG00000004034	gfi1b	54	42.276	ENSMALG00000011720	-	85	42.276
ENSMALG00000004034	gfi1b	68	47.321	ENSMALG00000015655	-	98	48.344
ENSMALG00000004034	gfi1b	63	42.254	ENSMALG00000012008	-	85	42.254
ENSMALG00000004034	gfi1b	59	42.029	ENSMALG00000011969	-	75	42.029
ENSMALG00000004034	gfi1b	52	32.812	ENSMALG00000001010	-	59	32.812
ENSMALG00000004034	gfi1b	52	44.615	ENSMALG00000002956	-	96	44.615
ENSMALG00000004034	gfi1b	50	48.624	ENSMALG00000013592	-	66	47.863
ENSMALG00000004034	gfi1b	56	42.604	ENSMALG00000018074	-	59	42.604
ENSMALG00000004034	gfi1b	59	37.158	ENSMALG00000004996	-	71	38.012
ENSMALG00000004034	gfi1b	51	40.741	ENSMALG00000006454	zbtb47b	77	40.741
ENSMALG00000004034	gfi1b	52	38.168	ENSMALG00000008638	-	57	38.168
ENSMALG00000004034	gfi1b	55	34.868	ENSMALG00000002274	-	100	34.868
ENSMALG00000004034	gfi1b	79	41.135	ENSMALG00000005554	-	98	41.135
ENSMALG00000004034	gfi1b	63	44.828	ENSMALG00000004279	-	88	44.828
ENSMALG00000004034	gfi1b	62	34.043	ENSMALG00000011493	-	84	33.871
ENSMALG00000004034	gfi1b	54	38.686	ENSMALG00000011860	-	57	38.686
ENSMALG00000004034	gfi1b	59	45.238	ENSMALG00000006887	-	97	45.238
ENSMALG00000004034	gfi1b	51	45.270	ENSMALG00000004413	-	92	45.270
ENSMALG00000004034	gfi1b	53	39.375	ENSMALG00000016121	-	51	39.375
ENSMALG00000004034	gfi1b	62	46.980	ENSMALG00000007812	-	98	46.980
ENSMALG00000004034	gfi1b	58	33.862	ENSMALG00000000710	-	56	33.862
ENSMALG00000004034	gfi1b	54	42.647	ENSMALG00000019842	ZNF319	86	42.647
ENSMALG00000004034	gfi1b	55	44.304	ENSMALG00000021985	-	77	44.304
ENSMALG00000004034	gfi1b	52	41.250	ENSMALG00000005562	-	62	41.250
ENSMALG00000004034	gfi1b	54	39.634	ENSMALG00000008786	-	87	41.667
ENSMALG00000004034	gfi1b	51	45.455	ENSMALG00000012116	-	96	45.455
ENSMALG00000004034	gfi1b	51	38.095	ENSMALG00000014761	-	65	38.095
ENSMALG00000004034	gfi1b	54	39.752	ENSMALG00000021084	-	58	39.752
ENSMALG00000004034	gfi1b	57	42.857	ENSMALG00000013323	-	92	41.722
ENSMALG00000004034	gfi1b	72	41.379	ENSMALG00000018062	-	55	41.379
ENSMALG00000004034	gfi1b	59	40.517	ENSMALG00000012757	-	75	40.517
ENSMALG00000004034	gfi1b	64	38.554	ENSMALG00000009834	-	77	38.554
ENSMALG00000004034	gfi1b	56	42.353	ENSMALG00000012129	-	71	42.353
ENSMALG00000004034	gfi1b	61	41.096	ENSMALG00000008930	-	80	41.096
ENSMALG00000004034	gfi1b	67	46.203	ENSMALG00000003906	-	98	46.203
ENSMALG00000004034	gfi1b	51	42.568	ENSMALG00000010693	-	61	42.568
ENSMALG00000004034	gfi1b	59	36.598	ENSMALG00000007403	-	86	35.814
ENSMALG00000004034	gfi1b	50	41.228	ENSMALG00000019991	-	98	39.394
ENSMALG00000004034	gfi1b	63	43.796	ENSMALG00000012043	-	97	43.210
ENSMALG00000004034	gfi1b	68	43.966	ENSMALG00000019139	-	86	43.966
ENSMALG00000004034	gfi1b	60	47.170	ENSMALG00000004579	-	94	46.212
ENSMALG00000004034	gfi1b	59	48.101	ENSMALG00000007051	-	96	46.835
ENSMALG00000004034	gfi1b	60	44.604	ENSMALG00000012721	-	73	44.604
ENSMALG00000004034	gfi1b	100	51.459	ENSMALG00000014672	gfi1ab	100	51.459
ENSMALG00000004034	gfi1b	60	42.857	ENSMALG00000011992	-	90	37.186
ENSMALG00000004034	gfi1b	55	42.262	ENSMALG00000000252	-	81	42.262
ENSMALG00000004034	gfi1b	52	44.512	ENSMALG00000001085	-	91	44.512
ENSMALG00000004034	gfi1b	51	43.478	ENSMALG00000003448	-	96	43.478
ENSMALG00000004034	gfi1b	52	46.207	ENSMALG00000014911	-	69	46.207
ENSMALG00000004034	gfi1b	52	41.071	ENSMALG00000000494	-	63	41.071
ENSMALG00000004034	gfi1b	59	45.000	ENSMALG00000004647	-	96	45.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000004034	gfi1b	100	83.232	ENSAPOG00000001296	gfi1b	100	83.232	Acanthochromis_polyacanthus
ENSMALG00000004034	gfi1b	99	70.732	ENSACIG00000002190	gfi1b	99	70.732	Amphilophus_citrinellus
ENSMALG00000004034	gfi1b	100	82.927	ENSAOCG00000021187	gfi1b	100	82.927	Amphiprion_ocellaris
ENSMALG00000004034	gfi1b	100	83.537	ENSAPEG00000016196	gfi1b	100	83.537	Amphiprion_percula
ENSMALG00000004034	gfi1b	100	86.626	ENSATEG00000002534	gfi1b	100	86.626	Anabas_testudineus
ENSMALG00000004034	gfi1b	100	59.118	ENSAPLG00000003373	GFI1B	100	59.118	Anas_platyrhynchos
ENSMALG00000004034	gfi1b	99	77.064	ENSACLG00000027053	gfi1b	99	77.064	Astatotilapia_calliptera
ENSMALG00000004034	gfi1b	100	70.294	ENSAMXG00000037544	GFI1B	100	70.294	Astyanax_mexicanus
ENSMALG00000004034	gfi1b	100	57.357	ENSCAPG00000010404	GFI1B	100	57.357	Cavia_aperea
ENSMALG00000004034	gfi1b	100	57.880	ENSCPBG00000021186	GFI1B	100	57.880	Chrysemys_picta_bellii
ENSMALG00000004034	gfi1b	100	79.394	ENSCSEG00000001315	gfi1b	100	79.394	Cynoglossus_semilaevis
ENSMALG00000004034	gfi1b	100	76.220	ENSCVAG00000017168	gfi1b	100	76.220	Cyprinodon_variegatus
ENSMALG00000004034	gfi1b	100	69.591	ENSDARG00000079947	gfi1b	99	83.544	Danio_rerio
ENSMALG00000004034	gfi1b	57	55.615	ENSEEUG00000012609	-	83	55.615	Erinaceus_europaeus
ENSMALG00000004034	gfi1b	100	76.855	ENSELUG00000016933	gfi1b	100	76.855	Esox_lucius
ENSMALG00000004034	gfi1b	100	53.825	ENSFALG00000001479	GFI1B	100	53.825	Ficedula_albicollis
ENSMALG00000004034	gfi1b	100	83.232	ENSFHEG00000015138	gfi1b	100	83.232	Fundulus_heteroclitus
ENSMALG00000004034	gfi1b	80	78.409	ENSGMOG00000019123	gfi1b	97	78.409	Gadus_morhua
ENSMALG00000004034	gfi1b	100	58.065	ENSGALG00000003478	GFI1B	100	58.065	Gallus_gallus
ENSMALG00000004034	gfi1b	71	91.880	ENSGAFG00000003059	gfi1b	100	91.880	Gambusia_affinis
ENSMALG00000004034	gfi1b	100	77.054	ENSGACG00000018134	gfi1b	100	77.054	Gasterosteus_aculeatus
ENSMALG00000004034	gfi1b	100	60.237	ENSGAGG00000021327	GFI1B	100	60.237	Gopherus_agassizii
ENSMALG00000004034	gfi1b	99	77.064	ENSHBUG00000005451	gfi1b	99	77.064	Haplochromis_burtoni
ENSMALG00000004034	gfi1b	100	76.524	ENSHCOG00000013713	gfi1b	100	76.524	Hippocampus_comes
ENSMALG00000004034	gfi1b	100	73.134	ENSIPUG00000012769	gfi1b	100	73.134	Ictalurus_punctatus
ENSMALG00000004034	gfi1b	99	53.158	ENSJJAG00000016355	Gfi1b	100	53.158	Jaculus_jaculus
ENSMALG00000004034	gfi1b	100	79.939	ENSKMAG00000016047	gfi1b	100	79.939	Kryptolebias_marmoratus
ENSMALG00000004034	gfi1b	100	83.735	ENSLBEG00000020297	gfi1b	99	84.036	Labrus_bergylta
ENSMALG00000004034	gfi1b	100	59.281	ENSLACG00000012207	GFI1B	100	59.281	Latimeria_chalumnae
ENSMALG00000004034	gfi1b	100	67.456	ENSLOCG00000005750	gfi1b	100	67.456	Lepisosteus_oculatus
ENSMALG00000004034	gfi1b	100	59.050	ENSLAFG00000022367	GFI1B	100	59.050	Loxodonta_africana
ENSMALG00000004034	gfi1b	100	88.720	ENSMAMG00000003040	gfi1b	100	88.720	Mastacembelus_armatus
ENSMALG00000004034	gfi1b	99	76.758	ENSMZEG00005015594	gfi1b	99	76.758	Maylandia_zebra
ENSMALG00000004034	gfi1b	100	58.065	ENSMGAG00000006129	GFI1B	100	58.065	Meleagris_gallopavo
ENSMALG00000004034	gfi1b	100	85.106	ENSMMOG00000011764	gfi1b	100	85.106	Mola_mola
ENSMALG00000004034	gfi1b	100	53.425	ENSMODG00000012600	GFI1B	100	53.425	Monodelphis_domestica
ENSMALG00000004034	gfi1b	99	59.697	ENSNGAG00000003333	Gfi1b	100	59.697	Nannospalax_galili
ENSMALG00000004034	gfi1b	99	77.439	ENSNBRG00000012391	gfi1b	99	77.439	Neolamprologus_brichardi
ENSMALG00000004034	gfi1b	99	77.744	ENSONIG00000013011	gfi1b	94	90.503	Oreochromis_niloticus
ENSMALG00000004034	gfi1b	100	60.121	ENSOANG00000014723	GFI1B	100	60.121	Ornithorhynchus_anatinus
ENSMALG00000004034	gfi1b	84	71.014	ENSORLG00000014390	GFI1B	96	71.014	Oryzias_latipes
ENSMALG00000004034	gfi1b	100	76.220	ENSORLG00020003719	GFI1B	100	76.220	Oryzias_latipes_hni
ENSMALG00000004034	gfi1b	100	76.524	ENSORLG00015017142	gfi1b	100	76.524	Oryzias_latipes_hsok
ENSMALG00000004034	gfi1b	100	75.610	ENSOMEG00000015149	GFI1B	100	75.610	Oryzias_melastigma
ENSMALG00000004034	gfi1b	100	59.459	ENSOGAG00000008879	GFI1B	100	60.479	Otolemur_garnettii
ENSMALG00000004034	gfi1b	100	69.643	ENSPKIG00000007643	gfi1b	100	69.643	Paramormyrops_kingsleyae
ENSMALG00000004034	gfi1b	100	57.714	ENSPSIG00000012112	GFI1B	100	57.714	Pelodiscus_sinensis
ENSMALG00000004034	gfi1b	99	68.168	ENSPMGG00000006021	gfi1b	99	69.069	Periophthalmus_magnuspinnatus
ENSMALG00000004034	gfi1b	100	51.872	ENSPCIG00000019724	GFI1B	100	51.872	Phascolarctos_cinereus
ENSMALG00000004034	gfi1b	100	81.791	ENSPFOG00000003460	gfi1b	100	81.791	Poecilia_formosa
ENSMALG00000004034	gfi1b	100	83.283	ENSPLAG00000021960	GFI1B	100	83.283	Poecilia_latipinna
ENSMALG00000004034	gfi1b	100	80.236	ENSPLAG00000017181	GFI1B	100	80.236	Poecilia_latipinna
ENSMALG00000004034	gfi1b	100	82.979	ENSPMEG00000019220	gfi1b	100	82.979	Poecilia_mexicana
ENSMALG00000004034	gfi1b	100	82.979	ENSPMEG00000001556	GFI1B	100	82.979	Poecilia_mexicana
ENSMALG00000004034	gfi1b	100	82.979	ENSPREG00000021718	gfi1b	100	82.979	Poecilia_reticulata
ENSMALG00000004034	gfi1b	99	75.758	ENSPNYG00000018422	gfi1b	99	75.758	Pundamilia_nyererei
ENSMALG00000004034	gfi1b	100	69.436	ENSPNAG00000021118	gfi1b	100	69.436	Pygocentrus_nattereri
ENSMALG00000004034	gfi1b	100	48.936	ENSSHAG00000006462	GFI1B	100	48.936	Sarcophilus_harrisii
ENSMALG00000004034	gfi1b	83	62.500	ENSSFOG00015011566	gfi1b	90	62.500	Scleropages_formosus
ENSMALG00000004034	gfi1b	100	84.195	ENSSMAG00000015181	gfi1b	98	84.195	Scophthalmus_maximus
ENSMALG00000004034	gfi1b	100	89.329	ENSSDUG00000011604	gfi1b	100	89.329	Seriola_dumerili
ENSMALG00000004034	gfi1b	100	89.024	ENSSLDG00000013823	gfi1b	100	89.024	Seriola_lalandi_dorsalis
ENSMALG00000004034	gfi1b	100	48.397	ENSSPUG00000016039	GFI1B	100	48.397	Sphenodon_punctatus
ENSMALG00000004034	gfi1b	100	84.451	ENSSPAG00000022914	gfi1b	100	84.451	Stegastes_partitus
ENSMALG00000004034	gfi1b	51	92.105	ENSTGUG00000005282	-	100	92.105	Taeniopygia_guttata
ENSMALG00000004034	gfi1b	100	81.402	ENSTRUG00000004525	gfi1b	100	81.402	Takifugu_rubripes
ENSMALG00000004034	gfi1b	100	79.635	ENSTNIG00000003834	gfi1b	100	79.635	Tetraodon_nigroviridis
ENSMALG00000004034	gfi1b	100	42.943	ENSTBEG00000014459	GFI1B	100	42.943	Tupaia_belangeri
ENSMALG00000004034	gfi1b	100	57.522	ENSXETG00000006263	gfi1b	100	58.407	Xenopus_tropicalis
ENSMALG00000004034	gfi1b	100	83.891	ENSXMAG00000027589	gfi1b	100	83.891	Xiphophorus_maculatus