EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000004057 (Gene tree)
Gene ID: 109954411
Gene Symbol: parp1
Alias: si:dkey-206f10.3|wu:fc60f12|zgc:110092
Full Name: poly(ADP-ribose) polymerase 1
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 13859 bases
Position: chrKV884697.1:2678936-2692794
Accession: 109954411
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000005703	PARP	PF00644.20	1.4e-74	1	1
ENSMALP00000005751	PARP	PF00644.20	7.6e-64	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000005876	-	3057	-	ENSMALP00000005751	1018 (aa)	-	-
ENSMALT00000005828	-	3985	XM_020589753	ENSMALP00000005703	1014 (aa)	XP_020445409	UPI0009B37F91

Gene Model

Click here to download ENSMALG00000004057's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb03410	Base excision repair	KEGG
malb04210	Apoptosis	KEGG
malb04217	Necroptosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000004057's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000004057	parp1	50	41.085	ENSMALG00000014182	parp2	94	42.153

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000004057	parp1	100	68.560	ENSG00000143799	PARP1	100	68.560	Homo_sapiens
ENSMALG00000004057	parp1	100	88.363	ENSAPOG00000006414	parp1	100	88.363	Acanthochromis_polyacanthus
ENSMALG00000004057	parp1	96	67.442	ENSAMEG00000014451	PARP1	100	67.543	Ailuropoda_melanoleuca
ENSMALG00000004057	parp1	100	88.067	ENSACIG00000005651	parp1	100	88.067	Amphilophus_citrinellus
ENSMALG00000004057	parp1	100	89.448	ENSAOCG00000021005	parp1	100	89.448	Amphiprion_ocellaris
ENSMALG00000004057	parp1	100	89.448	ENSAPEG00000004784	parp1	100	89.448	Amphiprion_percula
ENSMALG00000004057	parp1	100	88.363	ENSATEG00000010457	parp1	100	88.363	Anabas_testudineus
ENSMALG00000004057	parp1	87	72.820	ENSAPLG00000014039	PARP1	99	72.140	Anas_platyrhynchos
ENSMALG00000004057	parp1	100	70.138	ENSACAG00000006189	PARP1	100	70.432	Anolis_carolinensis
ENSMALG00000004057	parp1	100	68.328	ENSANAG00000032699	PARP1	100	68.915	Aotus_nancymaae
ENSMALG00000004057	parp1	100	87.771	ENSACLG00000015489	parp1	100	87.771	Astatotilapia_calliptera
ENSMALG00000004057	parp1	100	78.474	ENSAMXG00000006465	parp1	100	79.354	Astyanax_mexicanus
ENSMALG00000004057	parp1	100	66.373	ENSBTAG00000000837	PARP1	100	66.960	Bos_taurus
ENSMALG00000004057	parp1	85	42.748	WBGene00004049	parp-1	98	45.914	Caenorhabditis_elegans
ENSMALG00000004057	parp1	100	67.840	ENSCJAG00000012831	PARP1	100	68.426	Callithrix_jacchus
ENSMALG00000004057	parp1	96	66.973	ENSCAFG00000016089	PARP1	100	67.551	Canis_familiaris
ENSMALG00000004057	parp1	100	67.644	ENSCAFG00020001660	PARP1	100	67.840	Canis_lupus_dingo
ENSMALG00000004057	parp1	100	66.993	ENSCHIG00000018072	PARP1	100	67.610	Capra_hircus
ENSMALG00000004057	parp1	90	69.760	ENSTSYG00000003699	PARP1	99	69.760	Carlito_syrichta
ENSMALG00000004057	parp1	96	57.215	ENSCAPG00000011113	-	99	57.361	Cavia_aperea
ENSMALG00000004057	parp1	100	67.906	ENSCPOG00000015643	-	100	67.906	Cavia_porcellus
ENSMALG00000004057	parp1	100	68.952	ENSCCAG00000033484	PARP1	100	68.952	Cebus_capucinus
ENSMALG00000004057	parp1	100	68.426	ENSCATG00000038981	PARP1	100	68.426	Cercocebus_atys
ENSMALG00000004057	parp1	99	67.815	ENSCLAG00000006637	PARP1	99	67.850	Chinchilla_lanigera
ENSMALG00000004057	parp1	66	78.125	ENSCHOG00000003539	PARP1	66	78.125	Choloepus_hoffmanni
ENSMALG00000004057	parp1	99	71.330	ENSCPBG00000011958	PARP1	99	71.330	Chrysemys_picta_bellii
ENSMALG00000004057	parp1	98	67.400	ENSCANG00000041340	PARP1	100	68.228	Colobus_angolensis_palliatus
ENSMALG00000004057	parp1	100	67.843	ENSCGRG00001020559	Parp1	100	68.235	Cricetulus_griseus_chok1gshd
ENSMALG00000004057	parp1	96	67.926	ENSCGRG00000004864	Parp1	100	68.335	Cricetulus_griseus_crigri
ENSMALG00000004057	parp1	100	90.361	ENSCSEG00000020665	parp1	100	85.222	Cynoglossus_semilaevis
ENSMALG00000004057	parp1	99	86.605	ENSCVAG00000021372	parp1	99	86.605	Cyprinodon_variegatus
ENSMALG00000004057	parp1	100	80.550	ENSDARG00000019529	parp1	100	80.039	Danio_rerio
ENSMALG00000004057	parp1	96	66.940	ENSDNOG00000012059	PARP1	100	67.656	Dasypus_novemcinctus
ENSMALG00000004057	parp1	96	66.803	ENSDORG00000005234	Parp1	100	67.518	Dipodomys_ordii
ENSMALG00000004057	parp1	99	41.089	FBgn0010247	Parp	99	41.089	Drosophila_melanogaster
ENSMALG00000004057	parp1	87	78.125	ENSETEG00000013254	PARP1	88	78.125	Echinops_telfairi
ENSMALG00000004057	parp1	97	57.753	ENSEBUG00000005820	parp1	100	57.789	Eptatretus_burgeri
ENSMALG00000004057	parp1	98	67.498	ENSEASG00005013275	PARP1	99	68.495	Equus_asinus_asinus
ENSMALG00000004057	parp1	100	67.385	ENSECAG00000019207	PARP1	100	68.266	Equus_caballus
ENSMALG00000004057	parp1	99	65.388	ENSEEUG00000012253	PARP1	99	65.947	Erinaceus_europaeus
ENSMALG00000004057	parp1	100	79.586	ENSELUG00000017336	parp1	98	82.292	Esox_lucius
ENSMALG00000004057	parp1	97	67.444	ENSFCAG00000005777	PARP1	100	68.560	Felis_catus
ENSMALG00000004057	parp1	99	71.677	ENSFALG00000011578	PARP1	100	72.495	Ficedula_albicollis
ENSMALG00000004057	parp1	96	67.109	ENSFDAG00000017662	PARP1	100	67.109	Fukomys_damarensis
ENSMALG00000004057	parp1	100	86.305	ENSFHEG00000001117	parp1	100	86.305	Fundulus_heteroclitus
ENSMALG00000004057	parp1	99	81.416	ENSGMOG00000014929	parp1	100	81.416	Gadus_morhua
ENSMALG00000004057	parp1	99	72.359	ENSGALG00000009228	PARP1	99	72.557	Gallus_gallus
ENSMALG00000004057	parp1	100	86.798	ENSGAFG00000010450	parp1	100	86.798	Gambusia_affinis
ENSMALG00000004057	parp1	100	87.205	ENSGACG00000011280	parp1	100	87.205	Gasterosteus_aculeatus
ENSMALG00000004057	parp1	99	70.652	ENSGAGG00000010066	PARP1	99	71.105	Gopherus_agassizii
ENSMALG00000004057	parp1	100	68.266	ENSGGOG00000006308	PARP1	100	68.266	Gorilla_gorilla
ENSMALG00000004057	parp1	100	88.659	ENSHBUG00000010490	parp1	100	88.659	Haplochromis_burtoni
ENSMALG00000004057	parp1	99	66.004	ENSHGLG00000003992	PARP1	95	66.004	Heterocephalus_glaber_female
ENSMALG00000004057	parp1	99	66.004	ENSHGLG00100016965	PARP1	95	66.004	Heterocephalus_glaber_male
ENSMALG00000004057	parp1	100	84.510	ENSHCOG00000011619	parp1	100	85.196	Hippocampus_comes
ENSMALG00000004057	parp1	100	79.395	ENSIPUG00000020250	parp1	100	79.004	Ictalurus_punctatus
ENSMALG00000004057	parp1	100	68.622	ENSSTOG00000016000	PARP1	100	68.622	Ictidomys_tridecemlineatus
ENSMALG00000004057	parp1	100	67.451	ENSJJAG00000023497	Parp1	100	68.039	Jaculus_jaculus
ENSMALG00000004057	parp1	100	86.305	ENSKMAG00000011627	parp1	100	86.404	Kryptolebias_marmoratus
ENSMALG00000004057	parp1	100	88.363	ENSLBEG00000013376	parp1	100	88.363	Labrus_bergylta
ENSMALG00000004057	parp1	99	55.230	ENSLACG00000002735	PARP1	99	55.545	Latimeria_chalumnae
ENSMALG00000004057	parp1	100	76.598	ENSLOCG00000015798	parp1	100	77.625	Lepisosteus_oculatus
ENSMALG00000004057	parp1	99	66.633	ENSLAFG00000007830	PARP1	100	67.380	Loxodonta_africana
ENSMALG00000004057	parp1	100	68.328	ENSMFAG00000002526	PARP1	100	68.328	Macaca_fascicularis
ENSMALG00000004057	parp1	100	68.426	ENSMMUG00000021820	PARP1	100	68.426	Macaca_mulatta
ENSMALG00000004057	parp1	100	68.426	ENSMNEG00000034074	PARP1	100	68.426	Macaca_nemestrina
ENSMALG00000004057	parp1	100	66.764	ENSMLEG00000012344	PARP1	100	66.764	Mandrillus_leucophaeus
ENSMALG00000004057	parp1	100	89.250	ENSMAMG00000020652	parp1	100	89.250	Mastacembelus_armatus
ENSMALG00000004057	parp1	100	88.955	ENSMZEG00005016907	parp1	100	88.955	Maylandia_zebra
ENSMALG00000004057	parp1	99	72.364	ENSMGAG00000007760	PARP1	100	72.671	Meleagris_gallopavo
ENSMALG00000004057	parp1	100	68.235	ENSMAUG00000008306	Parp1	100	68.235	Mesocricetus_auratus
ENSMALG00000004057	parp1	100	65.689	ENSMICG00000017076	PARP1	100	65.689	Microcebus_murinus
ENSMALG00000004057	parp1	100	68.235	ENSMOCG00000014315	Parp1	100	68.235	Microtus_ochrogaster
ENSMALG00000004057	parp1	100	87.046	ENSMMOG00000015966	parp1	100	86.948	Mola_mola
ENSMALG00000004057	parp1	100	68.333	ENSMODG00000006076	PARP1	100	68.627	Monodelphis_domestica
ENSMALG00000004057	parp1	100	67.805	MGP_CAROLIEiJ_G0014978	Parp1	100	78.571	Mus_caroli
ENSMALG00000004057	parp1	100	67.707	ENSMUSG00000026496	Parp1	99	78.571	Mus_musculus
ENSMALG00000004057	parp1	100	67.707	MGP_SPRETEiJ_G0015777	Parp1	100	78.571	Mus_spretus
ENSMALG00000004057	parp1	100	67.644	ENSMPUG00000004585	PARP1	100	67.742	Mustela_putorius_furo
ENSMALG00000004057	parp1	73	75.116	ENSMLUG00000012285	PARP1	81	75.116	Myotis_lucifugus
ENSMALG00000004057	parp1	99	67.653	ENSNGAG00000003885	Parp1	99	68.047	Nannospalax_galili
ENSMALG00000004057	parp1	100	87.771	ENSNBRG00000017434	parp1	100	87.771	Neolamprologus_brichardi
ENSMALG00000004057	parp1	100	61.779	ENSNLEG00000013905	PARP1	100	61.779	Nomascus_leucogenys
ENSMALG00000004057	parp1	67	79.104	ENSMEUG00000007720	PARP1	87	79.104	Notamacropus_eugenii
ENSMALG00000004057	parp1	100	69.246	ENSOPRG00000011722	PARP1	100	69.833	Ochotona_princeps
ENSMALG00000004057	parp1	100	67.353	ENSODEG00000007424	PARP1	100	67.710	Octodon_degus
ENSMALG00000004057	parp1	100	88.560	ENSONIG00000013486	parp1	100	88.560	Oreochromis_niloticus
ENSMALG00000004057	parp1	99	70.072	ENSOANG00000001488	PARP1	100	70.378	Ornithorhynchus_anatinus
ENSMALG00000004057	parp1	100	68.622	ENSOCUG00000017820	PARP1	100	69.178	Oryctolagus_cuniculus
ENSMALG00000004057	parp1	100	85.714	ENSORLG00000013691	parp1	100	85.714	Oryzias_latipes
ENSMALG00000004057	parp1	97	85.947	ENSORLG00020001074	parp1	99	85.947	Oryzias_latipes_hni
ENSMALG00000004057	parp1	100	85.911	ENSORLG00015007090	parp1	100	85.911	Oryzias_latipes_hsok
ENSMALG00000004057	parp1	100	68.462	ENSOGAG00000016206	PARP1	100	68.364	Otolemur_garnettii
ENSMALG00000004057	parp1	100	66.862	ENSOARG00000000811	PARP1	100	67.707	Ovis_aries
ENSMALG00000004057	parp1	100	68.168	ENSPPAG00000040862	PARP1	100	68.168	Pan_paniscus
ENSMALG00000004057	parp1	96	67.245	ENSPPRG00000003528	PARP1	100	68.061	Panthera_pardus
ENSMALG00000004057	parp1	93	57.922	ENSPTIG00000009102	PARP1	98	58.360	Panthera_tigris_altaica
ENSMALG00000004057	parp1	100	68.168	ENSPTRG00000002049	PARP1	100	68.168	Pan_troglodytes
ENSMALG00000004057	parp1	100	68.555	ENSPANG00000011198	PARP1	100	68.555	Papio_anubis
ENSMALG00000004057	parp1	100	78.937	ENSPKIG00000006039	parp1	100	79.445	Paramormyrops_kingsleyae
ENSMALG00000004057	parp1	99	70.540	ENSPSIG00000016374	PARP1	100	70.846	Pelodiscus_sinensis
ENSMALG00000004057	parp1	100	81.041	ENSPMGG00000008936	parp1	100	81.041	Periophthalmus_magnuspinnatus
ENSMALG00000004057	parp1	100	68.137	ENSPEMG00000020230	Parp1	100	68.137	Peromyscus_maniculatus_bairdii
ENSMALG00000004057	parp1	99	68.571	ENSPCIG00000006436	PARP1	99	71.848	Phascolarctos_cinereus
ENSMALG00000004057	parp1	100	85.222	ENSPFOG00000002342	parp1	100	85.222	Poecilia_formosa
ENSMALG00000004057	parp1	100	86.601	ENSPLAG00000000909	parp1	100	86.601	Poecilia_latipinna
ENSMALG00000004057	parp1	100	87.094	ENSPMEG00000013979	parp1	100	87.094	Poecilia_mexicana
ENSMALG00000004057	parp1	100	86.798	ENSPREG00000001114	parp1	100	86.798	Poecilia_reticulata
ENSMALG00000004057	parp1	96	68.061	ENSPPYG00000000164	PARP1	100	68.061	Pongo_abelii
ENSMALG00000004057	parp1	56	77.778	ENSPCAG00000005558	-	55	77.778	Procavia_capensis
ENSMALG00000004057	parp1	100	68.266	ENSPCOG00000016918	PARP1	100	69.013	Propithecus_coquereli
ENSMALG00000004057	parp1	90	77.358	ENSPVAG00000005543	PARP1	85	77.358	Pteropus_vampyrus
ENSMALG00000004057	parp1	100	87.771	ENSPNYG00000009702	parp1	100	87.771	Pundamilia_nyererei
ENSMALG00000004057	parp1	100	80.235	ENSPNAG00000002787	parp1	100	80.822	Pygocentrus_nattereri
ENSMALG00000004057	parp1	100	67.777	ENSRNOG00000003084	Parp1	100	67.546	Rattus_norvegicus
ENSMALG00000004057	parp1	100	68.622	ENSRBIG00000044893	PARP1	99	70.883	Rhinopithecus_bieti
ENSMALG00000004057	parp1	100	68.622	ENSRROG00000029280	PARP1	99	70.883	Rhinopithecus_roxellana
ENSMALG00000004057	parp1	99	50.839	ENSRROG00000040615	-	97	58.961	Rhinopithecus_roxellana
ENSMALG00000004057	parp1	100	68.168	ENSSBOG00000010144	PARP1	100	69.110	Saimiri_boliviensis_boliviensis
ENSMALG00000004057	parp1	99	68.814	ENSSHAG00000001991	PARP1	100	69.325	Sarcophilus_harrisii
ENSMALG00000004057	parp1	100	78.782	ENSSFOG00015020017	parp1	100	78.880	Scleropages_formosus
ENSMALG00000004057	parp1	100	87.771	ENSSMAG00000013799	parp1	100	87.771	Scophthalmus_maximus
ENSMALG00000004057	parp1	100	89.744	ENSSDUG00000016626	parp1	100	89.744	Seriola_dumerili
ENSMALG00000004057	parp1	100	89.546	ENSSLDG00000006384	parp1	100	89.546	Seriola_lalandi_dorsalis
ENSMALG00000004057	parp1	53	76.852	ENSSARG00000009436	-	58	76.852	Sorex_araneus
ENSMALG00000004057	parp1	100	66.273	ENSSPUG00000007790	PARP1	100	67.158	Sphenodon_punctatus
ENSMALG00000004057	parp1	100	85.799	ENSSPAG00000019074	parp1	100	88.590	Stegastes_partitus
ENSMALG00000004057	parp1	100	67.483	ENSSSCG00000023660	PARP1	100	68.133	Sus_scrofa
ENSMALG00000004057	parp1	98	69.967	ENSTGUG00000004260	-	100	71.872	Taeniopygia_guttata
ENSMALG00000004057	parp1	100	85.404	ENSTRUG00000014490	parp1	100	85.404	Takifugu_rubripes
ENSMALG00000004057	parp1	100	83.562	ENSTNIG00000016384	parp1	100	83.464	Tetraodon_nigroviridis
ENSMALG00000004057	parp1	88	73.864	ENSTBEG00000002364	PARP1	92	73.864	Tupaia_belangeri
ENSMALG00000004057	parp1	100	62.684	ENSTTRG00000000188	PARP1	100	63.539	Tursiops_truncatus
ENSMALG00000004057	parp1	96	67.955	ENSUAMG00000014388	PARP1	100	68.057	Ursus_americanus
ENSMALG00000004057	parp1	96	61.366	ENSUMAG00000014555	PARP1	99	61.468	Ursus_maritimus
ENSMALG00000004057	parp1	83	78.039	ENSVPAG00000011411	PARP1	83	78.039	Vicugna_pacos
ENSMALG00000004057	parp1	96	66.871	ENSVVUG00000001655	PARP1	100	67.551	Vulpes_vulpes
ENSMALG00000004057	parp1	98	69.661	ENSXETG00000022610	parp1	99	69.392	Xenopus_tropicalis
ENSMALG00000004057	parp1	100	86.305	ENSXMAG00000003632	parp1	100	86.305	Xiphophorus_maculatus