EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000004269 (Gene tree)
Gene ID: 109964219
Gene Symbol: -
Alias: -
Full Name: ADP-ribosylation factor 1-like
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 4492 bases
Position: chrKV884773.1:182014-186505
Accession: 109964219
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000005959	MMR_HSR1	PF01926.23	4e-05	1	1
ENSMALP00000005972	MMR_HSR1	PF01926.23	6.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000006091	-	3626	XM_020607361	ENSMALP00000005959	180 (aa)	XP_020463017	UPI0009B3F35D
ENSMALT00000006104	-	3501	-	ENSMALP00000005972	227 (aa)	-	-

Gene Model

Click here to download ENSMALG00000004269's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000004269's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000004269	-	100	41.304	ENSMALG00000016513	ARL6	99	41.304
ENSMALG00000004269	-	88	46.988	ENSMALG00000010932	-	85	46.988
ENSMALG00000004269	-	95	47.953	ENSMALG00000009306	arl5c	97	47.953
ENSMALG00000004269	-	90	44.172	ENSMALG00000002001	arl11	94	44.172
ENSMALG00000004269	-	96	48.256	ENSMALG00000018749	arl2	93	48.256
ENSMALG00000004269	-	92	46.386	ENSMALG00000005347	arl3	91	46.386
ENSMALG00000004269	-	96	69.364	ENSMALG00000022638	zgc:110286	97	69.364
ENSMALG00000004269	-	93	44.910	ENSMALG00000014013	arl3l2	89	44.910
ENSMALG00000004269	-	63	30.081	ENSMALG00000012003	rab1ab	58	30.081
ENSMALG00000004269	-	100	93.370	ENSMALG00000015008	-	100	93.370
ENSMALG00000004269	-	63	30.081	ENSMALG00000006985	-	58	30.081
ENSMALG00000004269	-	92	32.530	ENSMALG00000019198	arl8a	89	32.530
ENSMALG00000004269	-	97	50.000	ENSMALG00000002500	arl5a	97	50.000
ENSMALG00000004269	-	98	31.351	ENSMALG00000014655	arl13b	53	32.164
ENSMALG00000004269	-	97	82.759	ENSMALG00000010117	-	97	82.759
ENSMALG00000004269	-	96	50.581	ENSMALG00000020370	ARL5B	96	50.581
ENSMALG00000004269	-	88	30.409	ENSMALG00000012595	srprb	63	30.409
ENSMALG00000004269	-	96	83.237	ENSMALG00000006020	-	96	83.237
ENSMALG00000004269	-	96	32.184	ENSMALG00000008164	arl8bb	94	32.184
ENSMALG00000004269	-	91	43.030	ENSMALG00000004143	ARL6	91	43.030
ENSMALG00000004269	-	61	31.884	ENSMALG00000016635	sar1b	72	30.370
ENSMALG00000004269	-	100	93.370	ENSMALG00000014343	arf3b	100	93.370
ENSMALG00000004269	-	96	32.759	ENSMALG00000001217	arl8ba	94	32.759
ENSMALG00000004269	-	96	46.629	ENSMALG00000011378	arl4cb	91	46.629
ENSMALG00000004269	-	94	59.172	ENSMALG00000003003	arl1	98	59.509
ENSMALG00000004269	-	96	46.369	ENSMALG00000006786	-	88	46.369
ENSMALG00000004269	-	100	94.475	ENSMALG00000017258	arf2b	100	94.475

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000004269	-	100	98.333	ENSACIG00000012192	-	100	98.333	Amphilophus_citrinellus
ENSMALG00000004269	-	84	97.351	ENSAOCG00000001275	-	94	91.566	Amphiprion_ocellaris
ENSMALG00000004269	-	100	97.778	ENSAPEG00000016909	-	100	97.778	Amphiprion_percula
ENSMALG00000004269	-	100	98.889	ENSATEG00000003174	-	100	98.889	Anabas_testudineus
ENSMALG00000004269	-	100	96.667	ENSACLG00000004123	-	100	96.667	Astatotilapia_calliptera
ENSMALG00000004269	-	100	94.475	ENSAMXG00000019845	arf1	100	94.475	Astyanax_mexicanus
ENSMALG00000004269	-	100	97.778	ENSCVAG00000013374	-	100	97.778	Cyprinodon_variegatus
ENSMALG00000004269	-	100	94.475	ENSDARG00000009484	arf1	100	94.475	Danio_rerio
ENSMALG00000004269	-	100	95.028	ENSELUG00000022533	arf1	79	95.028	Esox_lucius
ENSMALG00000004269	-	100	97.222	ENSFHEG00000005859	-	100	97.222	Fundulus_heteroclitus
ENSMALG00000004269	-	96	89.017	ENSGMOG00000000429	arf1	95	89.017	Gadus_morhua
ENSMALG00000004269	-	100	97.778	ENSGAFG00000018151	-	100	97.778	Gambusia_affinis
ENSMALG00000004269	-	100	87.222	ENSGACG00000014195	-	97	87.222	Gasterosteus_aculeatus
ENSMALG00000004269	-	100	96.667	ENSHBUG00000002636	-	100	96.667	Haplochromis_burtoni
ENSMALG00000004269	-	100	93.923	ENSIPUG00000006311	arf1	100	93.923	Ictalurus_punctatus
ENSMALG00000004269	-	100	95.556	ENSKMAG00000018315	-	100	95.556	Kryptolebias_marmoratus
ENSMALG00000004269	-	99	90.503	ENSLBEG00000001998	arf1	99	90.503	Labrus_bergylta
ENSMALG00000004269	-	99	89.326	ENSLBEG00000023263	-	98	89.326	Labrus_bergylta
ENSMALG00000004269	-	100	98.333	ENSMAMG00000001553	-	100	98.333	Mastacembelus_armatus
ENSMALG00000004269	-	100	96.667	ENSMZEG00005022594	-	100	96.667	Maylandia_zebra
ENSMALG00000004269	-	100	96.667	ENSNBRG00000016455	-	100	96.667	Neolamprologus_brichardi
ENSMALG00000004269	-	100	96.667	ENSONIG00000001286	-	100	96.667	Oreochromis_niloticus
ENSMALG00000004269	-	100	97.778	ENSORLG00000023270	-	100	97.778	Oryzias_latipes
ENSMALG00000004269	-	100	97.222	ENSORLG00020006712	-	100	97.222	Oryzias_latipes_hni
ENSMALG00000004269	-	100	97.778	ENSORLG00015019836	-	100	97.778	Oryzias_latipes_hsok
ENSMALG00000004269	-	100	97.778	ENSOMEG00000023784	-	100	97.778	Oryzias_melastigma
ENSMALG00000004269	-	100	90.055	ENSPMGG00000014174	arf1	100	90.055	Periophthalmus_magnuspinnatus
ENSMALG00000004269	-	100	93.889	ENSPMAG00000002035	arf1	100	93.889	Petromyzon_marinus
ENSMALG00000004269	-	100	97.778	ENSPFOG00000014787	-	100	97.778	Poecilia_formosa
ENSMALG00000004269	-	100	97.778	ENSPLAG00000001041	-	100	97.778	Poecilia_latipinna
ENSMALG00000004269	-	100	97.778	ENSPMEG00000024077	-	100	97.778	Poecilia_mexicana
ENSMALG00000004269	-	100	97.778	ENSPREG00000009009	-	100	97.778	Poecilia_reticulata
ENSMALG00000004269	-	100	96.667	ENSPNYG00000009472	-	100	96.667	Pundamilia_nyererei
ENSMALG00000004269	-	94	96.450	ENSPNAG00000000098	arf1	93	96.450	Pygocentrus_nattereri
ENSMALG00000004269	-	99	78.333	YDL192W	-	99	78.333	Saccharomyces_cerevisiae
ENSMALG00000004269	-	99	77.654	YDL137W	-	99	77.654	Saccharomyces_cerevisiae
ENSMALG00000004269	-	100	92.222	ENSSMAG00000006125	-	100	92.222	Scophthalmus_maximus
ENSMALG00000004269	-	100	98.333	ENSSDUG00000017356	-	100	98.333	Seriola_dumerili
ENSMALG00000004269	-	100	98.333	ENSSLDG00000008504	-	100	98.333	Seriola_lalandi_dorsalis
ENSMALG00000004269	-	100	99.444	ENSSPAG00000011431	-	100	99.444	Stegastes_partitus
ENSMALG00000004269	-	100	96.667	ENSTRUG00000019870	-	100	96.667	Takifugu_rubripes
ENSMALG00000004269	-	100	95.000	ENSTNIG00000011685	-	100	95.000	Tetraodon_nigroviridis
ENSMALG00000004269	-	100	97.778	ENSXCOG00000016687	-	98	97.778	Xiphophorus_couchianus
ENSMALG00000004269	-	100	97.778	ENSXMAG00000009193	-	100	97.778	Xiphophorus_maculatus