EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000004680 (Gene tree)
Gene ID: 109956055
Gene Symbol: RBM38
Alias: HSRNASEB|RNPC1|SEB4D|dJ800J21.2|seb4B
Full Name: RNA-binding protein 38-like
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 8482 bases
Position: chrKV884706.1:6660279-6668760
Accession: 109956055
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000006559	RRM_1	PF00076.22	3.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000006698	RBM38-201	1142	XM_020592858	ENSMALP00000006559	262 (aa)	XP_020448514	-

Gene Model

Click here to download ENSMALG00000004680's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000004680's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000004680	RBM38	58	74.214	ENSMALG00000011585	rbm24b	85	68.317
ENSMALG00000004680	RBM38	60	75.625	ENSMALG00000022327	rbm38	68	75.625
ENSMALG00000004680	RBM38	58	71.975	ENSMALG00000014068	rbm24a	72	71.429

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000004680	RBM38	70	74.074	ENSG00000132819	RBM38	94	86.441	Homo_sapiens
ENSMALG00000004680	RBM38	72	96.296	ENSAPOG00000009939	-	86	96.296	Acanthochromis_polyacanthus
ENSMALG00000004680	RBM38	84	67.556	ENSAPOG00000003301	rbm38	76	75.263	Acanthochromis_polyacanthus
ENSMALG00000004680	RBM38	72	97.884	ENSACIG00000012502	-	100	98.305	Amphilophus_citrinellus
ENSMALG00000004680	RBM38	89	64.435	ENSACIG00000000010	rbm38	75	73.684	Amphilophus_citrinellus
ENSMALG00000004680	RBM38	72	95.767	ENSAOCG00000012559	RBM38	81	95.699	Amphiprion_ocellaris
ENSMALG00000004680	RBM38	84	67.556	ENSAOCG00000013497	-	76	75.263	Amphiprion_ocellaris
ENSMALG00000004680	RBM38	84	67.556	ENSAPEG00000013137	rbm38	81	75.263	Amphiprion_percula
ENSMALG00000004680	RBM38	72	95.767	ENSAPEG00000023581	-	77	95.767	Amphiprion_percula
ENSMALG00000004680	RBM38	89	63.445	ENSATEG00000016366	rbm38	78	72.678	Anabas_testudineus
ENSMALG00000004680	RBM38	72	97.354	ENSATEG00000016710	-	77	97.354	Anabas_testudineus
ENSMALG00000004680	RBM38	70	75.401	ENSACAG00000016238	RBM38	76	75.401	Anolis_carolinensis
ENSMALG00000004680	RBM38	67	76.374	ENSANAG00000031959	RBM38	82	90.099	Aotus_nancymaae
ENSMALG00000004680	RBM38	72	96.296	ENSACLG00000019514	-	77	96.296	Astatotilapia_calliptera
ENSMALG00000004680	RBM38	72	87.234	ENSAMXG00000015601	-	79	87.234	Astyanax_mexicanus
ENSMALG00000004680	RBM38	66	76.437	ENSAMXG00000038120	rbm38	73	76.437	Astyanax_mexicanus
ENSMALG00000004680	RBM38	70	73.016	ENSBTAG00000008105	RBM38	77	73.016	Bos_taurus
ENSMALG00000004680	RBM38	70	75.132	ENSCJAG00000019139	RBM38	82	90.099	Callithrix_jacchus
ENSMALG00000004680	RBM38	70	75.132	ENSCAFG00020021943	RBM38	77	75.132	Canis_lupus_dingo
ENSMALG00000004680	RBM38	70	71.958	ENSCHIG00000002609	RBM38	77	71.958	Capra_hircus
ENSMALG00000004680	RBM38	70	73.545	ENSCPOG00000012781	RBM38	77	73.545	Cavia_porcellus
ENSMALG00000004680	RBM38	70	75.132	ENSCCAG00000036872	RBM38	82	90.099	Cebus_capucinus
ENSMALG00000004680	RBM38	70	74.074	ENSCATG00000032133	RBM38	82	90.099	Cercocebus_atys
ENSMALG00000004680	RBM38	70	74.074	ENSCLAG00000005906	RBM38	80	74.074	Chinchilla_lanigera
ENSMALG00000004680	RBM38	70	74.074	ENSCSAG00000015503	RBM38	78	74.074	Chlorocebus_sabaeus
ENSMALG00000004680	RBM38	69	76.882	ENSCPBG00000024059	RBM38	84	76.882	Chrysemys_picta_bellii
ENSMALG00000004680	RBM38	56	61.538	ENSCING00000025102	-	66	62.658	Ciona_intestinalis
ENSMALG00000004680	RBM38	57	63.057	ENSCSAVG00000001132	-	58	63.057	Ciona_savignyi
ENSMALG00000004680	RBM38	67	56.425	ENSCANG00000030105	-	64	55.866	Colobus_angolensis_palliatus
ENSMALG00000004680	RBM38	71	71.503	ENSCGRG00001012928	Rbm38	80	71.503	Cricetulus_griseus_chok1gshd
ENSMALG00000004680	RBM38	72	93.122	ENSCSEG00000004701	-	78	94.382	Cynoglossus_semilaevis
ENSMALG00000004680	RBM38	80	59.155	ENSCSEG00000020943	rbm38	59	66.667	Cynoglossus_semilaevis
ENSMALG00000004680	RBM38	72	91.534	ENSCVAG00000005472	-	77	91.534	Cyprinodon_variegatus
ENSMALG00000004680	RBM38	71	70.000	ENSCVAG00000015952	rbm38	75	70.000	Cyprinodon_variegatus
ENSMALG00000004680	RBM38	82	75.000	ENSDARG00000058818	rbm38	79	82.540	Danio_rerio
ENSMALG00000004680	RBM38	67	76.111	ENSDNOG00000032004	RBM38	85	76.111	Dasypus_novemcinctus
ENSMALG00000004680	RBM38	70	73.016	ENSECAG00000007700	RBM38	77	73.016	Equus_caballus
ENSMALG00000004680	RBM38	71	70.103	ENSEEUG00000013489	RBM38	78	71.134	Erinaceus_europaeus
ENSMALG00000004680	RBM38	69	74.054	ENSELUG00000000585	-	80	74.054	Esox_lucius
ENSMALG00000004680	RBM38	72	88.660	ENSELUG00000005849	-	79	88.660	Esox_lucius
ENSMALG00000004680	RBM38	70	74.074	ENSFCAG00000042916	RBM38	82	89.109	Felis_catus
ENSMALG00000004680	RBM38	66	75.706	ENSFALG00000010805	RBM38	90	75.706	Ficedula_albicollis
ENSMALG00000004680	RBM38	86	62.771	ENSFHEG00000017748	rbm38	75	70.000	Fundulus_heteroclitus
ENSMALG00000004680	RBM38	77	86.070	ENSFHEG00000006160	-	84	90.476	Fundulus_heteroclitus
ENSMALG00000004680	RBM38	69	88.043	ENSGMOG00000016655	-	98	88.043	Gadus_morhua
ENSMALG00000004680	RBM38	69	75.806	ENSGALG00000026081	RBM38	84	75.806	Gallus_gallus
ENSMALG00000004680	RBM38	69	77.049	ENSGACG00000015224	rbm38	87	77.049	Gasterosteus_aculeatus
ENSMALG00000004680	RBM38	69	91.209	ENSGACG00000009873	-	84	91.209	Gasterosteus_aculeatus
ENSMALG00000004680	RBM38	69	77.419	ENSGAGG00000001187	RBM38	84	77.419	Gopherus_agassizii
ENSMALG00000004680	RBM38	89	64.017	ENSHBUG00000012058	rbm38	76	73.626	Haplochromis_burtoni
ENSMALG00000004680	RBM38	72	96.296	ENSHBUG00000011778	-	82	96.296	Haplochromis_burtoni
ENSMALG00000004680	RBM38	70	69.681	ENSHGLG00000015077	RBM38	77	73.016	Heterocephalus_glaber_female
ENSMALG00000004680	RBM38	72	93.651	ENSHCOG00000005622	-	54	93.651	Hippocampus_comes
ENSMALG00000004680	RBM38	71	58.919	ENSHCOG00000019040	rbm38	73	58.919	Hippocampus_comes
ENSMALG00000004680	RBM38	72	81.481	ENSIPUG00000019349	-	78	81.481	Ictalurus_punctatus
ENSMALG00000004680	RBM38	83	57.895	ENSKMAG00000012402	rbm38	79	64.674	Kryptolebias_marmoratus
ENSMALG00000004680	RBM38	81	66.972	ENSLBEG00000018878	rbm38	75	73.684	Labrus_bergylta
ENSMALG00000004680	RBM38	72	96.296	ENSLBEG00000016163	RBM38	82	96.296	Labrus_bergylta
ENSMALG00000004680	RBM38	91	71.130	ENSLOCG00000003456	rbm38	80	85.185	Lepisosteus_oculatus
ENSMALG00000004680	RBM38	70	74.074	ENSMFAG00000043808	RBM38	82	90.099	Macaca_fascicularis
ENSMALG00000004680	RBM38	70	74.074	ENSMMUG00000031391	RBM38	82	90.099	Macaca_mulatta
ENSMALG00000004680	RBM38	70	74.074	ENSMNEG00000034683	RBM38	82	90.099	Macaca_nemestrina
ENSMALG00000004680	RBM38	89	65.272	ENSMAMG00000024135	rbm38	75	75.263	Mastacembelus_armatus
ENSMALG00000004680	RBM38	72	96.296	ENSMAMG00000020499	RBM38	78	96.296	Mastacembelus_armatus
ENSMALG00000004680	RBM38	89	64.017	ENSMZEG00005026036	rbm38	75	73.158	Maylandia_zebra
ENSMALG00000004680	RBM38	72	96.296	ENSMZEG00005000849	-	82	96.296	Maylandia_zebra
ENSMALG00000004680	RBM38	71	73.057	ENSMAUG00000021211	Rbm38	80	73.057	Mesocricetus_auratus
ENSMALG00000004680	RBM38	67	75.824	ENSMICG00000038011	RBM38	83	75.824	Microcebus_murinus
ENSMALG00000004680	RBM38	72	72.165	ENSMOCG00000008715	Rbm38	80	72.165	Microtus_ochrogaster
ENSMALG00000004680	RBM38	72	96.825	ENSMMOG00000020051	-	82	97.297	Mola_mola
ENSMALG00000004680	RBM38	69	75.269	ENSMODG00000016458	RBM38	77	75.269	Monodelphis_domestica
ENSMALG00000004680	RBM38	72	68.394	MGP_CAROLIEiJ_G0024745	Rbm38	71	80.702	Mus_caroli
ENSMALG00000004680	RBM38	72	68.394	ENSMUSG00000027510	Rbm38	71	80.702	Mus_musculus
ENSMALG00000004680	RBM38	72	68.394	MGP_PahariEiJ_G0026186	Rbm38	71	80.702	Mus_pahari
ENSMALG00000004680	RBM38	72	68.394	MGP_SPRETEiJ_G0025665	Rbm38	71	80.702	Mus_spretus
ENSMALG00000004680	RBM38	67	75.275	ENSMPUG00000006518	RBM38	89	75.275	Mustela_putorius_furo
ENSMALG00000004680	RBM38	67	74.725	ENSMLUG00000011140	RBM38	83	74.725	Myotis_lucifugus
ENSMALG00000004680	RBM38	89	64.435	ENSNBRG00000022685	rbm38	78	73.016	Neolamprologus_brichardi
ENSMALG00000004680	RBM38	72	96.296	ENSNBRG00000022545	-	77	96.296	Neolamprologus_brichardi
ENSMALG00000004680	RBM38	70	74.603	ENSODEG00000007980	RBM38	77	74.603	Octodon_degus
ENSMALG00000004680	RBM38	89	64.435	ENSONIG00000017073	rbm38	77	73.684	Oreochromis_niloticus
ENSMALG00000004680	RBM38	72	96.296	ENSONIG00000020324	-	78	96.296	Oreochromis_niloticus
ENSMALG00000004680	RBM38	67	76.667	ENSOANG00000009259	RBM38	71	73.822	Ornithorhynchus_anatinus
ENSMALG00000004680	RBM38	71	66.316	ENSORLG00000012154	rbm38	75	66.316	Oryzias_latipes
ENSMALG00000004680	RBM38	72	91.534	ENSORLG00000027180	-	77	91.534	Oryzias_latipes
ENSMALG00000004680	RBM38	72	91.534	ENSORLG00020020751	-	77	91.534	Oryzias_latipes_hni
ENSMALG00000004680	RBM38	84	60.268	ENSORLG00020017871	rbm38	75	66.316	Oryzias_latipes_hni
ENSMALG00000004680	RBM38	72	91.534	ENSORLG00015017040	-	77	91.534	Oryzias_latipes_hsok
ENSMALG00000004680	RBM38	84	60.714	ENSORLG00015012606	rbm38	78	65.405	Oryzias_latipes_hsok
ENSMALG00000004680	RBM38	72	92.593	ENSOMEG00000023912	-	77	92.593	Oryzias_melastigma
ENSMALG00000004680	RBM38	84	62.054	ENSOMEG00000006805	rbm38	75	68.421	Oryzias_melastigma
ENSMALG00000004680	RBM38	70	74.603	ENSOGAG00000029136	RBM38	77	74.603	Otolemur_garnettii
ENSMALG00000004680	RBM38	70	74.074	ENSPPRG00000009507	RBM38	82	89.109	Panthera_pardus
ENSMALG00000004680	RBM38	70	74.074	ENSPTRG00000013661	RBM38	82	90.099	Pan_troglodytes
ENSMALG00000004680	RBM38	67	59.890	ENSPANG00000033127	-	76	58.791	Papio_anubis
ENSMALG00000004680	RBM38	70	74.074	ENSPANG00000020919	-	82	90.099	Papio_anubis
ENSMALG00000004680	RBM38	72	78.238	ENSPKIG00000025417	rbm38	79	78.238	Paramormyrops_kingsleyae
ENSMALG00000004680	RBM38	80	74.299	ENSPKIG00000018122	-	97	89.474	Paramormyrops_kingsleyae
ENSMALG00000004680	RBM38	71	76.316	ENSPSIG00000011649	RBM38	79	76.316	Pelodiscus_sinensis
ENSMALG00000004680	RBM38	72	86.458	ENSPMGG00000017094	-	78	86.458	Periophthalmus_magnuspinnatus
ENSMALG00000004680	RBM38	70	71.958	ENSPMGG00000011343	rbm38	75	71.958	Periophthalmus_magnuspinnatus
ENSMALG00000004680	RBM38	69	75.806	ENSPCIG00000013648	RBM38	77	75.806	Phascolarctos_cinereus
ENSMALG00000004680	RBM38	71	68.394	ENSPFOG00000011658	rbm38	76	69.588	Poecilia_formosa
ENSMALG00000004680	RBM38	72	90.526	ENSPLAG00000002500	-	77	90.526	Poecilia_latipinna
ENSMALG00000004680	RBM38	71	69.072	ENSPLAG00000005218	rbm38	76	69.072	Poecilia_latipinna
ENSMALG00000004680	RBM38	71	68.394	ENSPMEG00000015770	rbm38	76	69.588	Poecilia_mexicana
ENSMALG00000004680	RBM38	71	68.394	ENSPREG00000007398	rbm38	76	69.588	Poecilia_reticulata
ENSMALG00000004680	RBM38	70	73.545	ENSPCOG00000026201	RBM38	81	90.099	Propithecus_coquereli
ENSMALG00000004680	RBM38	71	46.354	ENSPVAG00000006457	RBM38	52	87.097	Pteropus_vampyrus
ENSMALG00000004680	RBM38	72	96.296	ENSPNYG00000019727	-	100	97.458	Pundamilia_nyererei
ENSMALG00000004680	RBM38	89	63.598	ENSPNYG00000021373	rbm38	75	72.632	Pundamilia_nyererei
ENSMALG00000004680	RBM38	72	79.474	ENSPNAG00000010596	rbm38	79	79.474	Pygocentrus_nattereri
ENSMALG00000004680	RBM38	72	85.714	ENSPNAG00000015123	-	98	82.222	Pygocentrus_nattereri
ENSMALG00000004680	RBM38	72	71.649	ENSRNOG00000006420	Rbm38	80	71.649	Rattus_norvegicus
ENSMALG00000004680	RBM38	70	59.677	ENSRROG00000036388	-	75	64.384	Rhinopithecus_roxellana
ENSMALG00000004680	RBM38	67	76.374	ENSSBOG00000031053	RBM38	93	90.099	Saimiri_boliviensis_boliviensis
ENSMALG00000004680	RBM38	81	71.163	ENSSFOG00015004453	rbm38	81	80.208	Scleropages_formosus
ENSMALG00000004680	RBM38	71	76.842	ENSSDUG00000022611	rbm38	75	76.842	Seriola_dumerili
ENSMALG00000004680	RBM38	72	97.884	ENSSDUG00000021082	RBM38	77	97.884	Seriola_dumerili
ENSMALG00000004680	RBM38	71	76.842	ENSSLDG00000010845	rbm38	82	76.190	Seriola_lalandi_dorsalis
ENSMALG00000004680	RBM38	72	98.942	ENSSLDG00000011778	RBM38	77	98.942	Seriola_lalandi_dorsalis
ENSMALG00000004680	RBM38	89	65.272	ENSSPAG00000011113	rbm38	75	74.737	Stegastes_partitus
ENSMALG00000004680	RBM38	72	96.296	ENSSPAG00000020989	RBM38	86	96.296	Stegastes_partitus
ENSMALG00000004680	RBM38	70	73.016	ENSSSCG00000007504	RBM38	77	73.016	Sus_scrofa
ENSMALG00000004680	RBM38	71	73.158	ENSTRUG00000024954	rbm38	76	73.158	Takifugu_rubripes
ENSMALG00000004680	RBM38	72	93.651	ENSTRUG00000019869	-	77	93.651	Takifugu_rubripes
ENSMALG00000004680	RBM38	69	94.505	ENSTNIG00000007093	-	82	94.505	Tetraodon_nigroviridis
ENSMALG00000004680	RBM38	70	74.074	ENSUAMG00000019780	RBM38	77	74.074	Ursus_americanus
ENSMALG00000004680	RBM38	70	75.132	ENSVVUG00000017246	RBM38	77	75.132	Vulpes_vulpes
ENSMALG00000004680	RBM38	69	72.581	ENSXETG00000011268	rbm38	82	72.581	Xenopus_tropicalis
ENSMALG00000004680	RBM38	64	76.301	ENSXCOG00000017324	-	70	76.301	Xiphophorus_couchianus
ENSMALG00000004680	RBM38	71	70.526	ENSXMAG00000023662	rbm38	75	70.526	Xiphophorus_maculatus