EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000005039 (Gene tree)
Gene ID: 109972896
Gene Symbol: srl
Alias: im:6899248|wu:fb94b10|zgc:153844
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 14131 bases
Position: chrKV884961.1:295308-309438
Accession: 109972896
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000007104	MMR_HSR1	PF01926.23	1.6e-08	1	1
ENSMALP00000007087	MMR_HSR1	PF01926.23	1.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000007251	-	1359	-	ENSMALP00000007104	452 (aa)	-	-
ENSMALT00000007234	-	3635	XM_020622121	ENSMALP00000007087	470 (aa)	XP_020477777	-

Gene Model

Click here to download ENSMALG00000005039's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000005039's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000005039	srl	88	32.010	ENSMALG00000005796	ehd4	71	32.010
ENSMALG00000005039	srl	82	33.780	ENSMALG00000015586	ehd3	69	34.026
ENSMALG00000005039	srl	86	31.701	ENSMALG00000012679	ehd1a	70	31.701
ENSMALG00000005039	srl	93	77.088	ENSMALG00000000670	SRL	98	77.088
ENSMALG00000005039	srl	90	33.173	ENSMALG00000008756	ehd2b	74	33.173

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000005039	srl	99	82.222	ENSG00000185739	SRL	99	83.023	Homo_sapiens
ENSMALG00000005039	srl	98	76.749	ENSAPOG00000012432	SRL	99	76.749	Acanthochromis_polyacanthus
ENSMALG00000005039	srl	100	95.329	ENSAPOG00000018093	srl	100	95.329	Acanthochromis_polyacanthus
ENSMALG00000005039	srl	98	82.353	ENSAMEG00000010862	SRL	50	82.353	Ailuropoda_melanoleuca
ENSMALG00000005039	srl	99	74.610	ENSACIG00000015419	SRL	100	74.610	Amphilophus_citrinellus
ENSMALG00000005039	srl	99	96.652	ENSACIG00000015799	srl	99	96.667	Amphilophus_citrinellus
ENSMALG00000005039	srl	96	96.774	ENSAOCG00000007574	srl	100	96.774	Amphiprion_ocellaris
ENSMALG00000005039	srl	100	76.380	ENSAOCG00000017049	SRL	98	76.837	Amphiprion_ocellaris
ENSMALG00000005039	srl	100	95.541	ENSAPEG00000006911	srl	100	95.541	Amphiprion_percula
ENSMALG00000005039	srl	100	73.230	ENSAPEG00000006533	SRL	98	73.942	Amphiprion_percula
ENSMALG00000005039	srl	99	75.325	ENSATEG00000009643	SRL	53	75.705	Anabas_testudineus
ENSMALG00000005039	srl	100	96.178	ENSATEG00000024315	srl	100	96.178	Anabas_testudineus
ENSMALG00000005039	srl	98	81.457	ENSACAG00000016380	SRL	86	79.915	Anolis_carolinensis
ENSMALG00000005039	srl	100	95.133	ENSACLG00000027685	srl	99	95.133	Astatotilapia_calliptera
ENSMALG00000005039	srl	99	73.276	ENSACLG00000024674	SRL	58	73.434	Astatotilapia_calliptera
ENSMALG00000005039	srl	98	92.325	ENSAMXG00000018789	srl	92	89.574	Astyanax_mexicanus
ENSMALG00000005039	srl	93	76.905	ENSAMXG00000038693	SRL	100	73.068	Astyanax_mexicanus
ENSMALG00000005039	srl	98	83.447	ENSBTAG00000001078	SRL	56	83.447	Bos_taurus
ENSMALG00000005039	srl	98	82.353	ENSCJAG00000019750	SRL	95	82.000	Callithrix_jacchus
ENSMALG00000005039	srl	98	82.353	ENSCAFG00000019233	SRL	82	82.353	Canis_familiaris
ENSMALG00000005039	srl	98	82.353	ENSCAFG00020025024	SRL	54	82.353	Canis_lupus_dingo
ENSMALG00000005039	srl	98	83.447	ENSCHIG00000017927	SRL	55	83.447	Capra_hircus
ENSMALG00000005039	srl	98	82.472	ENSTSYG00000007919	SRL	99	83.256	Carlito_syrichta
ENSMALG00000005039	srl	98	82.805	ENSCPOG00000012643	SRL	100	80.550	Cavia_porcellus
ENSMALG00000005039	srl	98	76.697	ENSCCAG00000032646	SRL	100	83.641	Cebus_capucinus
ENSMALG00000005039	srl	99	82.222	ENSCATG00000032227	-	95	82.222	Cercocebus_atys
ENSMALG00000005039	srl	98	83.484	ENSCLAG00000016242	SRL	100	81.184	Chinchilla_lanigera
ENSMALG00000005039	srl	85	85.455	ENSCHOG00000001618	SRL	52	85.455	Choloepus_hoffmanni
ENSMALG00000005039	srl	97	86.010	ENSCPBG00000026371	SRL	96	80.215	Chrysemys_picta_bellii
ENSMALG00000005039	srl	92	60.911	ENSCING00000005231	-	93	60.911	Ciona_intestinalis
ENSMALG00000005039	srl	99	82.000	ENSCANG00000035872	SRL	99	83.023	Colobus_angolensis_palliatus
ENSMALG00000005039	srl	98	83.258	ENSCGRG00001016630	Srl	100	80.761	Cricetulus_griseus_chok1gshd
ENSMALG00000005039	srl	98	83.258	ENSCGRG00000005458	Srl	100	80.761	Cricetulus_griseus_crigri
ENSMALG00000005039	srl	100	73.510	ENSCSEG00000011866	SRL	91	73.731	Cynoglossus_semilaevis
ENSMALG00000005039	srl	100	94.043	ENSCSEG00000016151	srl	100	94.043	Cynoglossus_semilaevis
ENSMALG00000005039	srl	100	93.617	ENSCVAG00000003513	srl	100	93.617	Cyprinodon_variegatus
ENSMALG00000005039	srl	98	76.106	ENSCVAG00000022465	SRL	61	75.271	Cyprinodon_variegatus
ENSMALG00000005039	srl	98	92.551	ENSDARG00000104587	srl	97	91.410	Danio_rerio
ENSMALG00000005039	srl	84	78.385	ENSDARG00000112959	CABZ01072309.1	100	78.385	Danio_rerio
ENSMALG00000005039	srl	98	82.805	ENSDNOG00000011643	SRL	53	82.805	Dasypus_novemcinctus
ENSMALG00000005039	srl	98	83.032	ENSDORG00000014807	Srl	96	81.718	Dipodomys_ordii
ENSMALG00000005039	srl	82	66.043	ENSEBUG00000015937	srl	94	66.043	Eptatretus_burgeri
ENSMALG00000005039	srl	98	83.447	ENSEASG00005000942	SRL	55	81.898	Equus_asinus_asinus
ENSMALG00000005039	srl	98	83.447	ENSECAG00000024219	SRL	93	83.447	Equus_caballus
ENSMALG00000005039	srl	98	86.433	ENSELUG00000015616	srl	100	83.984	Esox_lucius
ENSMALG00000005039	srl	98	82.127	ENSFCAG00000022075	SRL	93	82.127	Felis_catus
ENSMALG00000005039	srl	98	82.844	ENSFALG00000004328	SRL	63	82.844	Ficedula_albicollis
ENSMALG00000005039	srl	98	83.258	ENSFDAG00000006199	SRL	100	81.184	Fukomys_damarensis
ENSMALG00000005039	srl	100	93.617	ENSFHEG00000011239	srl	100	93.617	Fundulus_heteroclitus
ENSMALG00000005039	srl	98	76.244	ENSFHEG00000011854	SRL	98	76.471	Fundulus_heteroclitus
ENSMALG00000005039	srl	98	88.767	ENSGMOG00000014954	srl	100	88.767	Gadus_morhua
ENSMALG00000005039	srl	98	83.521	ENSGALG00000038884	SRL	96	82.599	Gallus_gallus
ENSMALG00000005039	srl	100	93.617	ENSGAFG00000000010	srl	100	93.617	Gambusia_affinis
ENSMALG00000005039	srl	99	76.837	ENSGAFG00000016984	SRL	100	76.837	Gambusia_affinis
ENSMALG00000005039	srl	98	92.952	ENSGACG00000011332	srl	99	92.952	Gasterosteus_aculeatus
ENSMALG00000005039	srl	99	82.222	ENSGGOG00000011312	-	95	82.222	Gorilla_gorilla
ENSMALG00000005039	srl	100	95.133	ENSHBUG00000007581	srl	99	95.133	Haplochromis_burtoni
ENSMALG00000005039	srl	99	73.707	ENSHBUG00000015710	SRL	58	73.707	Haplochromis_burtoni
ENSMALG00000005039	srl	98	83.032	ENSHGLG00000015271	SRL	100	80.761	Heterocephalus_glaber_female
ENSMALG00000005039	srl	98	83.032	ENSHGLG00100019378	SRL	100	80.761	Heterocephalus_glaber_male
ENSMALG00000005039	srl	99	96.205	ENSHCOG00000008687	srl	99	96.205	Hippocampus_comes
ENSMALG00000005039	srl	99	74.514	ENSHCOG00000001012	SRL	51	74.514	Hippocampus_comes
ENSMALG00000005039	srl	98	91.648	ENSIPUG00000012513	srl	97	90.487	Ictalurus_punctatus
ENSMALG00000005039	srl	96	69.037	ENSIPUG00000011609	SRL	95	69.037	Ictalurus_punctatus
ENSMALG00000005039	srl	98	82.805	ENSSTOG00000021151	-	100	80.338	Ictidomys_tridecemlineatus
ENSMALG00000005039	srl	98	83.484	ENSJJAG00000016400	Srl	100	81.395	Jaculus_jaculus
ENSMALG00000005039	srl	98	76.644	ENSKMAG00000019537	SRL	100	76.644	Kryptolebias_marmoratus
ENSMALG00000005039	srl	98	94.565	ENSKMAG00000014115	srl	95	94.565	Kryptolebias_marmoratus
ENSMALG00000005039	srl	100	93.631	ENSLBEG00000026643	srl	100	93.631	Labrus_bergylta
ENSMALG00000005039	srl	98	75.336	ENSLBEG00000013811	SRL	96	75.561	Labrus_bergylta
ENSMALG00000005039	srl	98	84.910	ENSLACG00000002825	SRL	99	84.187	Latimeria_chalumnae
ENSMALG00000005039	srl	99	88.341	ENSLOCG00000002644	srl	96	87.973	Lepisosteus_oculatus
ENSMALG00000005039	srl	98	81.900	ENSLAFG00000006329	SRL	50	81.900	Loxodonta_africana
ENSMALG00000005039	srl	95	83.023	ENSMFAG00000037383	SRL	99	83.023	Macaca_fascicularis
ENSMALG00000005039	srl	99	82.222	ENSMNEG00000019236	-	95	82.222	Macaca_nemestrina
ENSMALG00000005039	srl	99	75.111	ENSMLEG00000032156	SRL	94	75.111	Mandrillus_leucophaeus
ENSMALG00000005039	srl	98	75.109	ENSMAMG00000013756	SRL	53	75.109	Mastacembelus_armatus
ENSMALG00000005039	srl	99	96.429	ENSMAMG00000023322	srl	96	96.239	Mastacembelus_armatus
ENSMALG00000005039	srl	100	95.133	ENSMZEG00005004548	srl	99	95.133	Maylandia_zebra
ENSMALG00000005039	srl	99	73.491	ENSMZEG00005004010	SRL	58	73.491	Maylandia_zebra
ENSMALG00000005039	srl	98	83.521	ENSMGAG00000009342	SRL	96	84.960	Meleagris_gallopavo
ENSMALG00000005039	srl	98	82.619	ENSMICG00000032307	SRL	94	82.619	Microcebus_murinus
ENSMALG00000005039	srl	98	82.579	ENSMOCG00000008208	Srl	100	79.915	Microtus_ochrogaster
ENSMALG00000005039	srl	98	73.362	ENSMMOG00000021572	SRL	100	73.362	Mola_mola
ENSMALG00000005039	srl	99	94.643	ENSMMOG00000013970	srl	100	94.667	Mola_mola
ENSMALG00000005039	srl	98	83.333	ENSMODG00000016380	-	50	83.333	Monodelphis_domestica
ENSMALG00000005039	srl	98	83.937	MGP_CAROLIEiJ_G0020400	Srl	96	82.379	Mus_caroli
ENSMALG00000005039	srl	98	83.937	ENSMUSG00000022519	Srl	96	82.379	Mus_musculus
ENSMALG00000005039	srl	98	83.937	MGP_SPRETEiJ_G0021294	Srl	96	82.379	Mus_spretus
ENSMALG00000005039	srl	98	82.353	ENSMPUG00000015025	SRL	54	82.353	Mustela_putorius_furo
ENSMALG00000005039	srl	98	83.258	ENSMLUG00000030733	SRL	56	83.258	Myotis_lucifugus
ENSMALG00000005039	srl	99	83.111	ENSNGAG00000019741	Srl	96	82.159	Nannospalax_galili
ENSMALG00000005039	srl	99	95.536	ENSNBRG00000023775	srl	100	93.191	Neolamprologus_brichardi
ENSMALG00000005039	srl	99	73.276	ENSNBRG00000002422	SRL	56	75.694	Neolamprologus_brichardi
ENSMALG00000005039	srl	99	76.444	ENSNLEG00000029051	SRL	95	75.664	Nomascus_leucogenys
ENSMALG00000005039	srl	98	76.244	ENSOPRG00000000477	-	52	76.244	Ochotona_princeps
ENSMALG00000005039	srl	98	83.484	ENSODEG00000013256	SRL	96	81.938	Octodon_degus
ENSMALG00000005039	srl	99	95.787	ENSONIG00000005192	srl	100	92.754	Oreochromis_niloticus
ENSMALG00000005039	srl	100	94.255	ENSORLG00000008291	srl	97	94.255	Oryzias_latipes
ENSMALG00000005039	srl	98	74.266	ENSORLG00000015064	SRL	97	74.434	Oryzias_latipes
ENSMALG00000005039	srl	98	74.492	ENSORLG00020018173	SRL	97	74.661	Oryzias_latipes_hni
ENSMALG00000005039	srl	100	94.681	ENSORLG00020019784	srl	85	94.681	Oryzias_latipes_hni
ENSMALG00000005039	srl	100	94.255	ENSORLG00015009342	srl	97	94.255	Oryzias_latipes_hsok
ENSMALG00000005039	srl	98	74.661	ENSORLG00015019063	SRL	97	74.661	Oryzias_latipes_hsok
ENSMALG00000005039	srl	100	94.043	ENSOMEG00000010006	srl	100	94.043	Oryzias_melastigma
ENSMALG00000005039	srl	98	73.187	ENSOMEG00000005682	SRL	53	73.465	Oryzias_melastigma
ENSMALG00000005039	srl	98	82.844	ENSOGAG00000029266	SRL	54	82.844	Otolemur_garnettii
ENSMALG00000005039	srl	98	83.447	ENSOARG00000003074	SRL	55	83.447	Ovis_aries
ENSMALG00000005039	srl	99	82.222	ENSPPAG00000024919	-	99	83.023	Pan_paniscus
ENSMALG00000005039	srl	98	82.127	ENSPPRG00000010274	SRL	99	82.791	Panthera_pardus
ENSMALG00000005039	srl	98	82.127	ENSPTIG00000015162	SRL	99	82.791	Panthera_tigris_altaica
ENSMALG00000005039	srl	99	82.222	ENSPTRG00000007712	SRL	99	83.023	Pan_troglodytes
ENSMALG00000005039	srl	99	82.222	ENSPANG00000013804	SRL	98	81.360	Papio_anubis
ENSMALG00000005039	srl	98	79.684	ENSPKIG00000024974	SRL	91	78.681	Paramormyrops_kingsleyae
ENSMALG00000005039	srl	99	91.295	ENSPKIG00000006405	srl	100	89.429	Paramormyrops_kingsleyae
ENSMALG00000005039	srl	98	94.344	ENSPMGG00000021081	srl	95	94.344	Periophthalmus_magnuspinnatus
ENSMALG00000005039	srl	98	74.492	ENSPMGG00000023505	-	100	74.492	Periophthalmus_magnuspinnatus
ENSMALG00000005039	srl	98	82.805	ENSPEMG00000015842	Srl	100	80.550	Peromyscus_maniculatus_bairdii
ENSMALG00000005039	srl	93	68.578	ENSPMAG00000004786	srl	99	68.578	Petromyzon_marinus
ENSMALG00000005039	srl	98	83.108	ENSPCIG00000012128	SRL	98	82.444	Phascolarctos_cinereus
ENSMALG00000005039	srl	100	91.494	ENSPFOG00000011408	srl	96	91.379	Poecilia_formosa
ENSMALG00000005039	srl	99	94.643	ENSPLAG00000008017	srl	98	94.444	Poecilia_latipinna
ENSMALG00000005039	srl	99	75.501	ENSPLAG00000002932	SRL	100	75.501	Poecilia_latipinna
ENSMALG00000005039	srl	100	93.830	ENSPMEG00000006745	srl	98	94.444	Poecilia_mexicana
ENSMALG00000005039	srl	99	74.249	ENSPMEG00000005890	SRL	61	73.820	Poecilia_mexicana
ENSMALG00000005039	srl	99	94.866	ENSPREG00000007751	srl	100	94.457	Poecilia_reticulata
ENSMALG00000005039	srl	98	77.376	ENSPREG00000000315	SRL	100	76.615	Poecilia_reticulata
ENSMALG00000005039	srl	93	84.487	ENSPPYG00000007053	SRL	98	84.487	Pongo_abelii
ENSMALG00000005039	srl	98	82.993	ENSPCAG00000003378	-	50	82.993	Procavia_capensis
ENSMALG00000005039	srl	98	83.070	ENSPCOG00000023135	SRL	99	83.953	Propithecus_coquereli
ENSMALG00000005039	srl	98	82.579	ENSPVAG00000006586	SRL	54	82.579	Pteropus_vampyrus
ENSMALG00000005039	srl	99	73.491	ENSPNYG00000003423	SRL	58	73.491	Pundamilia_nyererei
ENSMALG00000005039	srl	100	94.912	ENSPNYG00000001200	srl	99	94.912	Pundamilia_nyererei
ENSMALG00000005039	srl	98	74.831	ENSPNAG00000007361	-	92	74.831	Pygocentrus_nattereri
ENSMALG00000005039	srl	98	91.648	ENSPNAG00000023106	srl	100	88.936	Pygocentrus_nattereri
ENSMALG00000005039	srl	99	82.222	ENSRBIG00000042358	SRL	50	82.222	Rhinopithecus_bieti
ENSMALG00000005039	srl	98	82.353	ENSSBOG00000029273	SRL	95	82.000	Saimiri_boliviensis_boliviensis
ENSMALG00000005039	srl	99	82.301	ENSSHAG00000011715	-	51	82.301	Sarcophilus_harrisii
ENSMALG00000005039	srl	98	93.679	ENSSFOG00015009773	srl	97	92.308	Scleropages_formosus
ENSMALG00000005039	srl	98	77.602	ENSSFOG00015021327	SRL	50	76.786	Scleropages_formosus
ENSMALG00000005039	srl	99	94.855	ENSSMAG00000016274	srl	100	93.843	Scophthalmus_maximus
ENSMALG00000005039	srl	98	74.725	ENSSMAG00000002232	SRL	50	74.725	Scophthalmus_maximus
ENSMALG00000005039	srl	98	96.388	ENSSDUG00000010808	srl	98	96.388	Seriola_dumerili
ENSMALG00000005039	srl	98	76.327	ENSSDUG00000009161	SRL	99	76.327	Seriola_dumerili
ENSMALG00000005039	srl	98	76.201	ENSSLDG00000014601	SRL	100	76.754	Seriola_lalandi_dorsalis
ENSMALG00000005039	srl	100	95.106	ENSSLDG00000022024	srl	100	95.106	Seriola_lalandi_dorsalis
ENSMALG00000005039	srl	98	83.258	ENSSPUG00000016859	SRL	97	83.258	Sphenodon_punctatus
ENSMALG00000005039	srl	99	96.429	ENSSPAG00000019105	srl	100	95.339	Stegastes_partitus
ENSMALG00000005039	srl	99	77.060	ENSSPAG00000014254	SRL	100	77.060	Stegastes_partitus
ENSMALG00000005039	srl	98	82.766	ENSSSCG00000007949	SRL	98	82.766	Sus_scrofa
ENSMALG00000005039	srl	80	86.188	ENSTGUG00000016121	-	100	86.188	Taeniopygia_guttata
ENSMALG00000005039	srl	98	83.070	ENSTGUG00000003951	-	98	82.366	Taeniopygia_guttata
ENSMALG00000005039	srl	93	77.327	ENSTRUG00000013310	SRL	55	77.327	Takifugu_rubripes
ENSMALG00000005039	srl	100	95.106	ENSTRUG00000006005	srl	100	95.106	Takifugu_rubripes
ENSMALG00000005039	srl	100	95.106	ENSTNIG00000009739	srl	100	95.106	Tetraodon_nigroviridis
ENSMALG00000005039	srl	98	82.353	ENSUAMG00000005701	SRL	55	82.353	Ursus_americanus
ENSMALG00000005039	srl	98	82.353	ENSUMAG00000002574	SRL	55	82.353	Ursus_maritimus
ENSMALG00000005039	srl	98	81.264	ENSXETG00000017313	srl	98	81.264	Xenopus_tropicalis
ENSMALG00000005039	srl	93	94.774	ENSXCOG00000010424	srl	97	94.774	Xiphophorus_couchianus
ENSMALG00000005039	srl	99	76.615	ENSXCOG00000014584	SRL	100	76.497	Xiphophorus_couchianus
ENSMALG00000005039	srl	99	74.138	ENSXMAG00000027598	SRL	63	74.298	Xiphophorus_maculatus
ENSMALG00000005039	srl	100	93.617	ENSXMAG00000004625	srl	95	93.617	Xiphophorus_maculatus