EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000005167 (Gene tree)
Gene ID: 109961351
Gene Symbol: rbm47
Alias: si:ch211-241e15.2|wu:fj94a03
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 27760 bases
Position: chrKV884742.1:2321046-2348805
Accession: 109961351
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000007284	RRM_1	PF00076.22	6e-40	1	3
ENSMALP00000007284	RRM_1	PF00076.22	6e-40	2	3
ENSMALP00000007284	RRM_1	PF00076.22	6e-40	3	3
ENSMALP00000007329	RRM_1	PF00076.22	8.7e-40	1	3
ENSMALP00000007329	RRM_1	PF00076.22	8.7e-40	2	3
ENSMALP00000007329	RRM_1	PF00076.22	8.7e-40	3	3
ENSMALP00000007268	RRM_1	PF00076.22	9.9e-40	1	3
ENSMALP00000007268	RRM_1	PF00076.22	9.9e-40	2	3
ENSMALP00000007268	RRM_1	PF00076.22	9.9e-40	3	3
ENSMALP00000007256	RRM_1	PF00076.22	1.1e-39	1	3
ENSMALP00000007256	RRM_1	PF00076.22	1.1e-39	2	3
ENSMALP00000007256	RRM_1	PF00076.22	1.1e-39	3	3
ENSMALP00000007302	RRM_1	PF00076.22	1.1e-39	1	3
ENSMALP00000007302	RRM_1	PF00076.22	1.1e-39	2	3
ENSMALP00000007302	RRM_1	PF00076.22	1.1e-39	3	3
ENSMALP00000007317	RRM_1	PF00076.22	1.1e-39	1	3
ENSMALP00000007317	RRM_1	PF00076.22	1.1e-39	2	3
ENSMALP00000007317	RRM_1	PF00076.22	1.1e-39	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000007406	-	2602	XM_020602069	ENSMALP00000007256	611 (aa)	XP_020457725	UPI0009B36F03
ENSMALT00000007468	-	2015	XM_020602073	ENSMALP00000007317	611 (aa)	XP_020457729	UPI0009B36F03
ENSMALT00000007480	-	1758	-	ENSMALP00000007329	585 (aa)	-	-
ENSMALT00000007435	-	2368	-	ENSMALP00000007284	533 (aa)	-	-
ENSMALT00000007453	-	2122	-	ENSMALP00000007302	611 (aa)	-	UPI0009B36F03
ENSMALT00000007419	-	2578	XM_020602076	ENSMALP00000007268	603 (aa)	XP_020457732	UPI0009B37157

Gene Model

Click here to download ENSMALG00000005167's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000005167's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000005167	rbm47	55	66.212	ENSMALG00000006185	rbm46	63	66.894
ENSMALG00000005167	rbm47	82	53.462	ENSMALG00000012992	a1cf	94	53.846
ENSMALG00000005167	rbm47	56	53.947	ENSMALG00000008623	hnrnpr	68	45.093
ENSMALG00000005167	rbm47	56	53.000	ENSMALG00000012279	syncripl	70	44.769

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000005167	rbm47	100	81.383	ENSG00000163694	RBM47	100	84.793	Homo_sapiens
ENSMALG00000005167	rbm47	100	95.630	ENSAPOG00000011062	rbm47	100	95.630	Acanthochromis_polyacanthus
ENSMALG00000005167	rbm47	94	84.225	ENSAMEG00000009672	RBM47	100	75.914	Ailuropoda_melanoleuca
ENSMALG00000005167	rbm47	100	93.209	ENSACIG00000011531	rbm47	100	93.548	Amphilophus_citrinellus
ENSMALG00000005167	rbm47	100	95.373	ENSAOCG00000022245	rbm47	100	95.373	Amphiprion_ocellaris
ENSMALG00000005167	rbm47	100	95.373	ENSAPEG00000018304	rbm47	100	95.373	Amphiprion_percula
ENSMALG00000005167	rbm47	100	96.124	ENSATEG00000018400	rbm47	100	94.617	Anabas_testudineus
ENSMALG00000005167	rbm47	100	75.833	ENSAPLG00000013974	RBM47	100	74.833	Anas_platyrhynchos
ENSMALG00000005167	rbm47	100	78.663	ENSACAG00000011833	RBM47	100	74.834	Anolis_carolinensis
ENSMALG00000005167	rbm47	100	83.245	ENSANAG00000029440	RBM47	100	82.979	Aotus_nancymaae
ENSMALG00000005167	rbm47	100	93.540	ENSACLG00000016902	rbm47	100	93.540	Astatotilapia_calliptera
ENSMALG00000005167	rbm47	100	85.347	ENSAMXG00000021794	rbm47	100	86.154	Astyanax_mexicanus
ENSMALG00000005167	rbm47	100	79.744	ENSBTAG00000002356	RBM47	100	77.349	Bos_taurus
ENSMALG00000005167	rbm47	98	85.319	ENSCJAG00000019385	RBM47	100	80.513	Callithrix_jacchus
ENSMALG00000005167	rbm47	93	80.697	ENSCAFG00000015898	RBM47	100	75.418	Canis_familiaris
ENSMALG00000005167	rbm47	78	84.136	ENSCAFG00020010558	RBM47	94	80.371	Canis_lupus_dingo
ENSMALG00000005167	rbm47	100	79.744	ENSCHIG00000026214	RBM47	100	77.349	Capra_hircus
ENSMALG00000005167	rbm47	84	86.547	ENSTSYG00000033612	RBM47	93	85.398	Carlito_syrichta
ENSMALG00000005167	rbm47	100	73.196	ENSCAPG00000008426	RBM47	100	71.906	Cavia_aperea
ENSMALG00000005167	rbm47	100	82.586	ENSCPOG00000014100	RBM47	100	76.461	Cavia_porcellus
ENSMALG00000005167	rbm47	99	55.630	ENSCCAG00000024397	-	99	55.462	Cebus_capucinus
ENSMALG00000005167	rbm47	100	84.574	ENSCCAG00000030129	-	100	80.256	Cebus_capucinus
ENSMALG00000005167	rbm47	100	81.383	ENSCATG00000042064	RBM47	100	83.245	Cercocebus_atys
ENSMALG00000005167	rbm47	100	82.493	ENSCLAG00000001684	RBM47	100	81.491	Chinchilla_lanigera
ENSMALG00000005167	rbm47	94	84.746	ENSCSAG00000017060	RBM47	100	77.205	Chlorocebus_sabaeus
ENSMALG00000005167	rbm47	89	74.550	ENSCHOG00000011731	RBM47	88	75.561	Choloepus_hoffmanni
ENSMALG00000005167	rbm47	100	82.564	ENSCPBG00000013831	RBM47	100	77.870	Chrysemys_picta_bellii
ENSMALG00000005167	rbm47	100	82.540	ENSCANG00000019997	RBM47	100	83.245	Colobus_angolensis_palliatus
ENSMALG00000005167	rbm47	100	82.979	ENSCGRG00001000623	-	100	80.256	Cricetulus_griseus_chok1gshd
ENSMALG00000005167	rbm47	100	77.984	ENSCGRG00001020102	-	100	79.576	Cricetulus_griseus_chok1gshd
ENSMALG00000005167	rbm47	100	80.000	ENSCGRG00000007762	-	100	80.380	Cricetulus_griseus_crigri
ENSMALG00000005167	rbm47	100	77.719	ENSCGRG00000014760	-	100	79.310	Cricetulus_griseus_crigri
ENSMALG00000005167	rbm47	100	90.339	ENSCSEG00000004545	rbm47	100	90.339	Cynoglossus_semilaevis
ENSMALG00000005167	rbm47	100	93.316	ENSCVAG00000020144	rbm47	100	93.316	Cyprinodon_variegatus
ENSMALG00000005167	rbm47	100	86.118	ENSDARG00000061985	rbm47	100	86.118	Danio_rerio
ENSMALG00000005167	rbm47	94	85.674	ENSDNOG00000046854	RBM47	100	77.872	Dasypus_novemcinctus
ENSMALG00000005167	rbm47	100	79.644	ENSDORG00000010144	Rbm47	100	75.868	Dipodomys_ordii
ENSMALG00000005167	rbm47	94	82.682	ENSETEG00000009194	RBM47	100	77.129	Echinops_telfairi
ENSMALG00000005167	rbm47	91	74.855	ENSEBUG00000011912	rbm47	83	73.410	Eptatretus_burgeri
ENSMALG00000005167	rbm47	94	85.393	ENSEASG00005008443	RBM47	100	77.554	Equus_asinus_asinus
ENSMALG00000005167	rbm47	94	85.393	ENSECAG00000004400	RBM47	100	77.554	Equus_caballus
ENSMALG00000005167	rbm47	75	83.550	ENSEEUG00000001194	RBM47	75	83.550	Erinaceus_europaeus
ENSMALG00000005167	rbm47	100	89.594	ENSELUG00000006148	rbm47	100	89.594	Esox_lucius
ENSMALG00000005167	rbm47	94	84.225	ENSFCAG00000012399	RBM47	100	77.479	Felis_catus
ENSMALG00000005167	rbm47	100	82.051	ENSFALG00000002861	RBM47	100	77.667	Ficedula_albicollis
ENSMALG00000005167	rbm47	100	81.600	ENSFDAG00000016326	RBM47	100	75.966	Fukomys_damarensis
ENSMALG00000005167	rbm47	100	91.774	ENSFHEG00000007938	rbm47	100	89.915	Fundulus_heteroclitus
ENSMALG00000005167	rbm47	100	87.848	ENSGMOG00000014802	rbm47	100	87.848	Gadus_morhua
ENSMALG00000005167	rbm47	73	82.353	ENSGALG00000014267	RBM47	99	84.043	Gallus_gallus
ENSMALG00000005167	rbm47	73	89.147	ENSGAFG00000020571	rbm47	98	92.703	Gambusia_affinis
ENSMALG00000005167	rbm47	100	91.774	ENSGACG00000016223	rbm47	100	91.774	Gasterosteus_aculeatus
ENSMALG00000005167	rbm47	100	82.564	ENSGAGG00000020051	RBM47	100	77.870	Gopherus_agassizii
ENSMALG00000005167	rbm47	100	81.383	ENSGGOG00000001367	RBM47	100	83.245	Gorilla_gorilla
ENSMALG00000005167	rbm47	100	93.540	ENSHBUG00000003520	rbm47	100	93.540	Haplochromis_burtoni
ENSMALG00000005167	rbm47	100	60.111	ENSHGLG00000016914	RBM47	100	76.582	Heterocephalus_glaber_female
ENSMALG00000005167	rbm47	100	82.667	ENSHGLG00100014028	-	100	79.337	Heterocephalus_glaber_male
ENSMALG00000005167	rbm47	100	76.607	ENSHGLG00100003071	-	100	67.899	Heterocephalus_glaber_male
ENSMALG00000005167	rbm47	99	91.963	ENSHCOG00000002074	rbm47	99	94.087	Hippocampus_comes
ENSMALG00000005167	rbm47	100	87.113	ENSIPUG00000004743	rbm47	100	84.864	Ictalurus_punctatus
ENSMALG00000005167	rbm47	100	81.167	ENSSTOG00000004727	RBM47	100	79.692	Ictidomys_tridecemlineatus
ENSMALG00000005167	rbm47	94	85.915	ENSJJAG00000013823	Rbm47	100	75.581	Jaculus_jaculus
ENSMALG00000005167	rbm47	100	91.282	ENSKMAG00000000084	rbm47	100	92.308	Kryptolebias_marmoratus
ENSMALG00000005167	rbm47	100	94.344	ENSLBEG00000008436	rbm47	100	94.207	Labrus_bergylta
ENSMALG00000005167	rbm47	94	87.395	ENSLACG00000007196	RBM47	100	77.629	Latimeria_chalumnae
ENSMALG00000005167	rbm47	100	81.557	ENSLOCG00000012966	rbm47	95	82.939	Lepisosteus_oculatus
ENSMALG00000005167	rbm47	100	77.892	ENSLAFG00000011998	RBM47	100	76.795	Loxodonta_africana
ENSMALG00000005167	rbm47	100	81.383	ENSMFAG00000037967	RBM47	100	83.245	Macaca_fascicularis
ENSMALG00000005167	rbm47	94	84.746	ENSMMUG00000012036	RBM47	100	82.902	Macaca_mulatta
ENSMALG00000005167	rbm47	100	81.117	ENSMNEG00000040774	RBM47	100	83.245	Macaca_nemestrina
ENSMALG00000005167	rbm47	100	82.857	ENSMLEG00000041432	RBM47	100	83.492	Mandrillus_leucophaeus
ENSMALG00000005167	rbm47	100	94.574	ENSMAMG00000019143	rbm47	100	94.574	Mastacembelus_armatus
ENSMALG00000005167	rbm47	100	93.540	ENSMZEG00005023659	rbm47	100	91.748	Maylandia_zebra
ENSMALG00000005167	rbm47	100	82.564	ENSMGAG00000012226	RBM47	100	77.280	Meleagris_gallopavo
ENSMALG00000005167	rbm47	100	81.963	ENSMAUG00000006493	Rbm47	100	79.747	Mesocricetus_auratus
ENSMALG00000005167	rbm47	100	78.933	ENSMICG00000026417	RBM47	100	78.149	Microcebus_murinus
ENSMALG00000005167	rbm47	100	82.447	ENSMOCG00000021170	Rbm47	100	80.380	Microtus_ochrogaster
ENSMALG00000005167	rbm47	100	93.798	ENSMMOG00000007260	rbm47	100	93.798	Mola_mola
ENSMALG00000005167	rbm47	100	81.748	ENSMODG00000007003	RBM47	100	77.667	Monodelphis_domestica
ENSMALG00000005167	rbm47	57	78.135	ENSMODG00000015426	-	97	76.452	Monodelphis_domestica
ENSMALG00000005167	rbm47	100	75.306	ENSMODG00000020561	-	100	72.466	Monodelphis_domestica
ENSMALG00000005167	rbm47	100	82.447	MGP_CAROLIEiJ_G0027258	Rbm47	100	82.181	Mus_caroli
ENSMALG00000005167	rbm47	100	82.447	ENSMUSG00000070780	Rbm47	100	82.181	Mus_musculus
ENSMALG00000005167	rbm47	100	82.713	MGP_PahariEiJ_G0017040	Rbm47	100	82.447	Mus_pahari
ENSMALG00000005167	rbm47	100	82.447	MGP_SPRETEiJ_G0028253	Rbm47	100	82.181	Mus_spretus
ENSMALG00000005167	rbm47	94	85.070	ENSMPUG00000006177	RBM47	94	76.461	Mustela_putorius_furo
ENSMALG00000005167	rbm47	100	80.818	ENSMLUG00000000889	RBM47	100	75.960	Myotis_lucifugus
ENSMALG00000005167	rbm47	100	80.256	ENSNGAG00000003325	Rbm47	100	75.541	Nannospalax_galili
ENSMALG00000005167	rbm47	100	94.057	ENSNBRG00000015092	rbm47	100	91.817	Neolamprologus_brichardi
ENSMALG00000005167	rbm47	100	81.383	ENSNLEG00000017151	RBM47	100	83.245	Nomascus_leucogenys
ENSMALG00000005167	rbm47	66	86.479	ENSMEUG00000009516	-	99	78.638	Notamacropus_eugenii
ENSMALG00000005167	rbm47	86	86.307	ENSOPRG00000016507	-	75	86.307	Ochotona_princeps
ENSMALG00000005167	rbm47	94	84.507	ENSODEG00000004873	RBM47	100	81.234	Octodon_degus
ENSMALG00000005167	rbm47	100	93.299	ENSONIG00000009061	rbm47	100	91.776	Oreochromis_niloticus
ENSMALG00000005167	rbm47	100	80.867	ENSOANG00000008978	RBM47	100	76.923	Ornithorhynchus_anatinus
ENSMALG00000005167	rbm47	100	79.434	ENSOCUG00000012034	RBM47	100	79.949	Oryctolagus_cuniculus
ENSMALG00000005167	rbm47	100	93.041	ENSORLG00000005847	rbm47	100	93.041	Oryzias_latipes
ENSMALG00000005167	rbm47	100	93.041	ENSORLG00020005154	rbm47	100	93.041	Oryzias_latipes_hni
ENSMALG00000005167	rbm47	100	93.299	ENSORLG00015000066	rbm47	100	93.299	Oryzias_latipes_hsok
ENSMALG00000005167	rbm47	100	93.282	ENSOMEG00000010730	rbm47	100	93.282	Oryzias_melastigma
ENSMALG00000005167	rbm47	94	85.070	ENSOGAG00000029367	-	100	76.628	Otolemur_garnettii
ENSMALG00000005167	rbm47	94	79.718	ENSOGAG00000025193	-	100	72.437	Otolemur_garnettii
ENSMALG00000005167	rbm47	100	68.792	ENSOARG00000012711	RBM47	100	69.463	Ovis_aries
ENSMALG00000005167	rbm47	94	84.746	ENSPPAG00000029763	RBM47	95	83.245	Pan_paniscus
ENSMALG00000005167	rbm47	100	81.530	ENSPPRG00000012873	RBM47	99	82.400	Panthera_pardus
ENSMALG00000005167	rbm47	86	76.494	ENSPTIG00000017046	RBM47	100	77.092	Panthera_tigris_altaica
ENSMALG00000005167	rbm47	100	81.383	ENSPTRG00000016006	RBM47	100	83.245	Pan_troglodytes
ENSMALG00000005167	rbm47	100	81.383	ENSPANG00000005980	RBM47	100	83.245	Papio_anubis
ENSMALG00000005167	rbm47	97	89.489	ENSPKIG00000013431	RBM47	98	84.496	Paramormyrops_kingsleyae
ENSMALG00000005167	rbm47	97	80.977	ENSPKIG00000005037	rbm47	100	78.536	Paramormyrops_kingsleyae
ENSMALG00000005167	rbm47	87	83.077	ENSPSIG00000017516	RBM47	97	79.096	Pelodiscus_sinensis
ENSMALG00000005167	rbm47	100	91.993	ENSPMGG00000018540	rbm47	100	91.993	Periophthalmus_magnuspinnatus
ENSMALG00000005167	rbm47	100	82.181	ENSPEMG00000011088	Rbm47	100	81.915	Peromyscus_maniculatus_bairdii
ENSMALG00000005167	rbm47	100	90.561	ENSPFOG00000007997	rbm47	100	90.561	Poecilia_formosa
ENSMALG00000005167	rbm47	100	90.306	ENSPLAG00000002072	rbm47	100	92.412	Poecilia_latipinna
ENSMALG00000005167	rbm47	100	90.537	ENSPMEG00000017492	rbm47	100	90.746	Poecilia_mexicana
ENSMALG00000005167	rbm47	100	90.537	ENSPREG00000008456	rbm47	100	92.412	Poecilia_reticulata
ENSMALG00000005167	rbm47	93	74.719	ENSPPYG00000014688	RBM47	100	68.067	Pongo_abelii
ENSMALG00000005167	rbm47	89	77.273	ENSPCAG00000011879	RBM47	81	82.707	Procavia_capensis
ENSMALG00000005167	rbm47	100	81.383	ENSPCOG00000023451	RBM47	100	81.915	Propithecus_coquereli
ENSMALG00000005167	rbm47	94	83.754	ENSPVAG00000003812	RBM47	100	76.127	Pteropus_vampyrus
ENSMALG00000005167	rbm47	100	93.540	ENSPNYG00000022868	rbm47	100	91.028	Pundamilia_nyererei
ENSMALG00000005167	rbm47	100	86.632	ENSPNAG00000007940	rbm47	100	84.072	Pygocentrus_nattereri
ENSMALG00000005167	rbm47	100	80.256	ENSRNOG00000002408	Rbm47	100	76.628	Rattus_norvegicus
ENSMALG00000005167	rbm47	100	82.540	ENSRBIG00000039601	RBM47	100	83.245	Rhinopithecus_bieti
ENSMALG00000005167	rbm47	100	82.540	ENSRROG00000044696	RBM47	100	83.245	Rhinopithecus_roxellana
ENSMALG00000005167	rbm47	100	75.169	ENSSBOG00000028475	RBM47	100	79.835	Saimiri_boliviensis_boliviensis
ENSMALG00000005167	rbm47	100	81.491	ENSSHAG00000017576	RBM47	100	80.720	Sarcophilus_harrisii
ENSMALG00000005167	rbm47	100	78.678	ENSSFOG00015012445	rbm47	100	78.017	Scleropages_formosus
ENSMALG00000005167	rbm47	99	78.912	ENSSFOG00015024101	RBM47	99	78.912	Scleropages_formosus
ENSMALG00000005167	rbm47	100	93.830	ENSSMAG00000009744	rbm47	100	94.177	Scophthalmus_maximus
ENSMALG00000005167	rbm47	100	94.023	ENSSDUG00000022684	rbm47	100	94.184	Seriola_dumerili
ENSMALG00000005167	rbm47	100	95.400	ENSSLDG00000003109	rbm47	100	95.571	Seriola_lalandi_dorsalis
ENSMALG00000005167	rbm47	85	79.733	ENSSARG00000001735	RBM47	75	80.752	Sorex_araneus
ENSMALG00000005167	rbm47	100	82.632	ENSSPUG00000007515	RBM47	100	81.746	Sphenodon_punctatus
ENSMALG00000005167	rbm47	100	96.088	ENSSPAG00000001257	rbm47	100	96.088	Stegastes_partitus
ENSMALG00000005167	rbm47	100	81.746	ENSSSCG00000008796	RBM47	100	77.013	Sus_scrofa
ENSMALG00000005167	rbm47	100	81.934	ENSTGUG00000008705	RBM47	100	77.129	Taeniopygia_guttata
ENSMALG00000005167	rbm47	100	90.614	ENSTRUG00000014050	rbm47	100	90.614	Takifugu_rubripes
ENSMALG00000005167	rbm47	100	92.248	ENSTNIG00000006127	rbm47	100	91.391	Tetraodon_nigroviridis
ENSMALG00000005167	rbm47	82	83.051	ENSTBEG00000001607	RBM47	76	79.733	Tupaia_belangeri
ENSMALG00000005167	rbm47	94	85.393	ENSTTRG00000002839	RBM47	100	77.143	Tursiops_truncatus
ENSMALG00000005167	rbm47	94	84.225	ENSUAMG00000021346	RBM47	100	76.461	Ursus_americanus
ENSMALG00000005167	rbm47	52	83.333	ENSVPAG00000000641	-	56	77.931	Vicugna_pacos
ENSMALG00000005167	rbm47	93	84.986	ENSVVUG00000014774	RBM47	100	75.879	Vulpes_vulpes
ENSMALG00000005167	rbm47	100	81.122	ENSXETG00000012802	rbm47	100	76.333	Xenopus_tropicalis
ENSMALG00000005167	rbm47	100	86.220	ENSXCOG00000000780	rbm47	100	92.954	Xiphophorus_couchianus
ENSMALG00000005167	rbm47	100	91.517	ENSXMAG00000009874	rbm47	100	91.688	Xiphophorus_maculatus