EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000005205 (Gene tree)
Gene ID: 109961985
Gene Symbol: tomm20a
Alias: arid4b|ch1073-321c8.1|wu:fk47b11
Full Name: AT-rich interaction domain 4B
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 42944 bases
Position: chrKV884691.1:5776724-5819667
Accession: 109961985
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000007319	Tudor-knot	PF11717.8	1.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000007470	-	6014	XM_020603298	ENSMALP00000007319	1293 (aa)	XP_020458954	UPI0009B4C383
ENSMALT00000007493	-	5831	XM_020603314	ENSMALP00000007342	1232 (aa)	XP_020458970	UPI0009B45131

Gene Model

Click here to download ENSMALG00000005205's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000005205's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000005205	tomm20a	67	74.272	ENSG00000054267	ARID4B	85	74.272	Homo_sapiens
ENSMALG00000005205	tomm20a	100	90.651	ENSAPOG00000010823	tomm20a	100	90.115	Acanthochromis_polyacanthus
ENSMALG00000005205	tomm20a	90	74.634	ENSAMEG00000008801	ARID4B	92	60.552	Ailuropoda_melanoleuca
ENSMALG00000005205	tomm20a	93	92.199	ENSACIG00000006313	tomm20a	100	92.199	Amphilophus_citrinellus
ENSMALG00000005205	tomm20a	100	90.575	ENSAOCG00000003330	tomm20a	100	90.115	Amphiprion_ocellaris
ENSMALG00000005205	tomm20a	100	90.498	ENSAPEG00000024018	tomm20a	100	90.038	Amphiprion_percula
ENSMALG00000005205	tomm20a	100	89.051	ENSATEG00000014930	tomm20a	100	89.204	Anabas_testudineus
ENSMALG00000005205	tomm20a	100	50.712	ENSAPLG00000004422	ARID4B	99	49.527	Anas_platyrhynchos
ENSMALG00000005205	tomm20a	52	60.140	ENSACAG00000001289	ARID4B	99	50.769	Anolis_carolinensis
ENSMALG00000005205	tomm20a	67	74.029	ENSANAG00000038088	ARID4B	92	60.274	Aotus_nancymaae
ENSMALG00000005205	tomm20a	93	82.185	ENSACLG00000023521	tomm20a	100	81.274	Astatotilapia_calliptera
ENSMALG00000005205	tomm20a	95	61.236	ENSAMXG00000003657	tomm20a	91	76.998	Astyanax_mexicanus
ENSMALG00000005205	tomm20a	99	50.691	ENSCPOG00000034766	ARID4B	99	50.993	Cavia_porcellus
ENSMALG00000005205	tomm20a	59	45.869	ENSCLAG00000003255	ARID4B	99	52.206	Chinchilla_lanigera
ENSMALG00000005205	tomm20a	99	83.450	ENSCSEG00000012928	tomm20a	99	83.061	Cynoglossus_semilaevis
ENSMALG00000005205	tomm20a	100	82.655	ENSCVAG00000003244	tomm20a	100	81.658	Cyprinodon_variegatus
ENSMALG00000005205	tomm20a	100	66.009	ENSDARG00000090656	tomm20a	99	65.325	Danio_rerio
ENSMALG00000005205	tomm20a	88	62.198	ENSETEG00000005596	ARID4B	88	61.662	Echinops_telfairi
ENSMALG00000005205	tomm20a	69	54.054	ENSELUG00000018441	tomm20a	93	53.614	Esox_lucius
ENSMALG00000005205	tomm20a	54	59.387	ENSFCAG00000030096	ARID4B	54	60.602	Felis_catus
ENSMALG00000005205	tomm20a	100	82.698	ENSFHEG00000003798	tomm20a	100	82.470	Fundulus_heteroclitus
ENSMALG00000005205	tomm20a	90	74.118	ENSGMOG00000018747	tomm20a	91	71.245	Gadus_morhua
ENSMALG00000005205	tomm20a	99	79.848	ENSGACG00000004298	tomm20a	100	79.924	Gasterosteus_aculeatus
ENSMALG00000005205	tomm20a	100	86.559	ENSHBUG00000020369	tomm20a	100	86.713	Haplochromis_burtoni
ENSMALG00000005205	tomm20a	100	51.435	ENSHGLG00000012546	ARID4B	54	60.490	Heterocephalus_glaber_female
ENSMALG00000005205	tomm20a	100	51.435	ENSHGLG00100015436	ARID4B	54	60.490	Heterocephalus_glaber_male
ENSMALG00000005205	tomm20a	95	84.934	ENSHCOG00000010376	tomm20a	100	84.279	Hippocampus_comes
ENSMALG00000005205	tomm20a	100	64.329	ENSIPUG00000014234	arid4b	99	64.269	Ictalurus_punctatus
ENSMALG00000005205	tomm20a	100	52.177	ENSJJAG00000021368	Arid4b	99	51.800	Jaculus_jaculus
ENSMALG00000005205	tomm20a	92	76.051	ENSKMAG00000010987	tomm20a	98	74.140	Kryptolebias_marmoratus
ENSMALG00000005205	tomm20a	100	60.060	ENSLOCG00000015899	tomm20a	99	61.214	Lepisosteus_oculatus
ENSMALG00000005205	tomm20a	53	59.618	ENSLAFG00000014295	ARID4B	54	60.055	Loxodonta_africana
ENSMALG00000005205	tomm20a	93	89.530	ENSMAMG00000017134	tomm20a	99	89.818	Mastacembelus_armatus
ENSMALG00000005205	tomm20a	100	86.482	ENSMZEG00005009879	tomm20a	100	86.636	Maylandia_zebra
ENSMALG00000005205	tomm20a	67	74.515	ENSMICG00000016358	ARID4B	92	60.714	Microcebus_murinus
ENSMALG00000005205	tomm20a	94	89.059	ENSMMOG00000000561	tomm20a	98	87.965	Mola_mola
ENSMALG00000005205	tomm20a	93	87.736	ENSNBRG00000019684	tomm20a	100	90.566	Neolamprologus_brichardi
ENSMALG00000005205	tomm20a	53	60.218	ENSOCUG00000006605	ARID4B	54	60.749	Oryctolagus_cuniculus
ENSMALG00000005205	tomm20a	100	79.173	ENSORLG00000012510	tomm20a	100	78.931	Oryzias_latipes
ENSMALG00000005205	tomm20a	92	84.450	ENSORLG00020013988	tomm20a	100	85.412	Oryzias_latipes_hni
ENSMALG00000005205	tomm20a	92	85.096	ENSORLG00015022835	tomm20a	100	85.816	Oryzias_latipes_hsok
ENSMALG00000005205	tomm20a	100	79.969	ENSOMEG00000000521	tomm20a	100	79.739	Oryzias_melastigma
ENSMALG00000005205	tomm20a	90	73.747	ENSOGAG00000012476	ARID4B	86	60.863	Otolemur_garnettii
ENSMALG00000005205	tomm20a	53	61.149	ENSOARG00000003481	ARID4B	53	61.241	Ovis_aries
ENSMALG00000005205	tomm20a	52	80.451	ENSPMGG00000001596	tomm20a	89	80.451	Periophthalmus_magnuspinnatus
ENSMALG00000005205	tomm20a	100	51.570	ENSPCIG00000029756	ARID4B	54	61.506	Phascolarctos_cinereus
ENSMALG00000005205	tomm20a	100	82.698	ENSPFOG00000019430	tomm20a	100	83.765	Poecilia_formosa
ENSMALG00000005205	tomm20a	100	82.622	ENSPLAG00000010554	tomm20a	100	83.689	Poecilia_latipinna
ENSMALG00000005205	tomm20a	100	80.597	ENSPMEG00000003093	tomm20a	100	77.175	Poecilia_mexicana
ENSMALG00000005205	tomm20a	100	83.563	ENSPREG00000007996	tomm20a	100	82.722	Poecilia_reticulata
ENSMALG00000005205	tomm20a	67	74.515	ENSPCOG00000024328	ARID4B	92	59.918	Propithecus_coquereli
ENSMALG00000005205	tomm20a	88	60.354	ENSPVAG00000015159	ARID4B	90	61.250	Pteropus_vampyrus
ENSMALG00000005205	tomm20a	99	81.033	ENSPNYG00000013988	tomm20a	100	79.568	Pundamilia_nyererei
ENSMALG00000005205	tomm20a	100	68.175	ENSPNAG00000000523	tomm20a	92	66.462	Pygocentrus_nattereri
ENSMALG00000005205	tomm20a	66	72.167	ENSRBIG00000042029	ARID4B	96	48.981	Rhinopithecus_bieti
ENSMALG00000005205	tomm20a	53	59.811	ENSSHAG00000015214	ARID4B	99	51.684	Sarcophilus_harrisii
ENSMALG00000005205	tomm20a	100	60.909	ENSSFOG00015000132	arid4b	99	62.000	Scleropages_formosus
ENSMALG00000005205	tomm20a	75	51.988	ENSSFOG00015008923	tomm20a	94	50.790	Scleropages_formosus
ENSMALG00000005205	tomm20a	100	85.489	ENSSMAG00000010430	tomm20a	100	85.188	Scophthalmus_maximus
ENSMALG00000005205	tomm20a	100	91.859	ENSSDUG00000003019	tomm20a	100	91.782	Seriola_dumerili
ENSMALG00000005205	tomm20a	100	89.877	ENSSPAG00000007358	tomm20a	100	89.417	Stegastes_partitus
ENSMALG00000005205	tomm20a	69	74.447	ENSTRUG00000002893	tomm20a	100	74.336	Takifugu_rubripes
ENSMALG00000005205	tomm20a	70	67.813	ENSTBEG00000003961	ARID4B	62	67.568	Tupaia_belangeri
ENSMALG00000005205	tomm20a	100	51.578	ENSTTRG00000002228	ARID4B	99	51.681	Tursiops_truncatus
ENSMALG00000005205	tomm20a	89	71.320	ENSUMAG00000006905	ARID4B	99	51.004	Ursus_maritimus
ENSMALG00000005205	tomm20a	100	50.110	ENSXETG00000024651	arid4b	87	58.659	Xenopus_tropicalis
ENSMALG00000005205	tomm20a	100	84.025	ENSXMAG00000006538	tomm20a	100	83.871	Xiphophorus_maculatus