EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000005362 (Gene tree)
Gene ID: 109951316
Gene Symbol: setd1ba
Alias: im:7156157|si:dkey-237o15.4
Full Name: SET domain containing 1B
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 15507 bases
Position: chrKV885063.1:119221-134727
Accession: 109951316
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000007544	RRM_1	PF00076.22	1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000007707	-	8692	XM_020585756	ENSMALP00000007544	1834 (aa)	XP_020441412	UPI0009B41A58

Gene Model

Click here to download ENSMALG00000005362's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb00310	Lysine degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000005362's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000005362	setd1ba	51	64.214	ENSMALG00000007401	setd1a	57	63.312

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000005362	setd1ba	55	91.740	ENSAPOG00000014731	setd1ba	100	86.801	Acanthochromis_polyacanthus
ENSMALG00000005362	setd1ba	55	86.234	ENSACIG00000016453	setd1ba	100	77.283	Amphilophus_citrinellus
ENSMALG00000005362	setd1ba	97	86.131	ENSAOCG00000012148	setd1ba	99	86.131	Amphiprion_ocellaris
ENSMALG00000005362	setd1ba	100	82.971	ENSAPEG00000010762	setd1ba	99	82.689	Amphiprion_percula
ENSMALG00000005362	setd1ba	91	87.778	ENSATEG00000021563	setd1ba	100	87.373	Anabas_testudineus
ENSMALG00000005362	setd1ba	87	56.609	ENSAPLG00000005217	SETD1B	86	56.609	Anas_platyrhynchos
ENSMALG00000005362	setd1ba	55	87.819	ENSACLG00000016584	setd1ba	100	82.628	Astatotilapia_calliptera
ENSMALG00000005362	setd1ba	69	79.448	ENSCLAG00000013200	SETD1B	87	56.752	Chinchilla_lanigera
ENSMALG00000005362	setd1ba	55	84.387	ENSCSEG00000001458	setd1ba	100	79.575	Cynoglossus_semilaevis
ENSMALG00000005362	setd1ba	55	77.953	ENSCVAG00000022068	setd1ba	99	73.781	Cyprinodon_variegatus
ENSMALG00000005362	setd1ba	83	72.819	ENSELUG00000022712	-	87	43.473	Esox_lucius
ENSMALG00000005362	setd1ba	52	90.159	ENSGMOG00000009831	setd1ba	59	90.159	Gadus_morhua
ENSMALG00000005362	setd1ba	88	81.693	ENSGAFG00000008712	setd1ba	97	80.099	Gambusia_affinis
ENSMALG00000005362	setd1ba	55	87.328	ENSHBUG00000019992	setd1ba	100	82.149	Haplochromis_burtoni
ENSMALG00000005362	setd1ba	100	76.572	ENSHCOG00000001951	setd1ba	99	76.075	Hippocampus_comes
ENSMALG00000005362	setd1ba	55	78.663	ENSKMAG00000007804	setd1ba	99	75.978	Kryptolebias_marmoratus
ENSMALG00000005362	setd1ba	100	88.063	ENSMAMG00000011027	setd1ba	100	87.189	Mastacembelus_armatus
ENSMALG00000005362	setd1ba	55	87.819	ENSMZEG00005026617	setd1ba	100	82.628	Maylandia_zebra
ENSMALG00000005362	setd1ba	100	82.684	ENSMMOG00000008190	setd1ba	99	83.161	Mola_mola
ENSMALG00000005362	setd1ba	55	87.721	ENSNBRG00000002915	setd1ba	99	80.619	Neolamprologus_brichardi
ENSMALG00000005362	setd1ba	50	79.755	ENSNLEG00000001254	SETD1B	84	59.783	Nomascus_leucogenys
ENSMALG00000005362	setd1ba	50	78.182	ENSODEG00000010155	SETD1B	80	56.822	Octodon_degus
ENSMALG00000005362	setd1ba	64	67.937	ENSONIG00000010832	-	51	67.601	Oreochromis_niloticus
ENSMALG00000005362	setd1ba	55	87.106	ENSONIG00000013898	setd1ba	99	81.769	Oreochromis_niloticus
ENSMALG00000005362	setd1ba	66	75.472	ENSORLG00015004156	setd1ba	98	76.046	Oryzias_latipes_hsok
ENSMALG00000005362	setd1ba	100	74.892	ENSOMEG00000002270	setd1ba	100	75.054	Oryzias_melastigma
ENSMALG00000005362	setd1ba	51	69.153	ENSPPRG00000012737	SETD1A	56	69.153	Panthera_pardus
ENSMALG00000005362	setd1ba	86	78.852	ENSPMGG00000011527	setd1ba	91	78.852	Periophthalmus_magnuspinnatus
ENSMALG00000005362	setd1ba	56	78.565	ENSPFOG00000019768	setd1ba	100	77.152	Poecilia_formosa
ENSMALG00000005362	setd1ba	100	77.056	ENSPREG00000011589	setd1ba	100	77.302	Poecilia_reticulata
ENSMALG00000005362	setd1ba	56	86.834	ENSPNYG00000009484	setd1ba	99	80.489	Pundamilia_nyererei
ENSMALG00000005362	setd1ba	55	65.805	ENSPNAG00000016011	setd1ba	99	60.011	Pygocentrus_nattereri
ENSMALG00000005362	setd1ba	55	93.300	ENSSDUG00000018313	setd1ba	100	86.079	Seriola_dumerili
ENSMALG00000005362	setd1ba	55	93.202	ENSSLDG00000015543	setd1ba	99	87.710	Seriola_lalandi_dorsalis
ENSMALG00000005362	setd1ba	100	86.663	ENSSPAG00000015470	setd1ba	100	86.282	Stegastes_partitus
ENSMALG00000005362	setd1ba	77	68.127	ENSSSCG00000009806	SETD1B	92	57.767	Sus_scrofa