EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000005486 (Gene tree)
Gene ID: 109967856
Gene Symbol: prpf18
Alias: zgc:91830
Full Name: pre-mRNA processing factor 18
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 6115 bases
Position: chrKV884693.1:822409-828523
Accession: 109967856
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000007715	PRP4	PF08799.11	2.6e-13	1	1
ENSMALP00000007715	Prp18	PF02840.15	2.3e-61	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000007880	-	1011	XM_020613721	ENSMALP00000007715	336 (aa)	XP_020469377	-

Gene Model

Click here to download ENSMALG00000005486's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000005486's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000005486	prpf18	100	78.571	ENSG00000165630	PRPF18	100	78.286	Homo_sapiens
ENSMALG00000005486	prpf18	100	87.500	ENSAPOG00000024177	prpf18	100	87.500	Acanthochromis_polyacanthus
ENSMALG00000005486	prpf18	100	78.000	ENSAMEG00000013591	-	100	77.714	Ailuropoda_melanoleuca
ENSMALG00000005486	prpf18	100	85.756	ENSACIG00000001186	prpf18	100	82.849	Amphilophus_citrinellus
ENSMALG00000005486	prpf18	98	86.944	ENSAOCG00000006572	prpf18	94	85.088	Amphiprion_ocellaris
ENSMALG00000005486	prpf18	100	87.209	ENSAPEG00000004564	prpf18	100	87.209	Amphiprion_percula
ENSMALG00000005486	prpf18	100	86.589	ENSATEG00000000303	prpf18	100	86.377	Anabas_testudineus
ENSMALG00000005486	prpf18	99	75.146	ENSAPLG00000003387	-	99	74.561	Anas_platyrhynchos
ENSMALG00000005486	prpf18	100	78.488	ENSACAG00000000818	-	100	77.907	Anolis_carolinensis
ENSMALG00000005486	prpf18	100	78.286	ENSANAG00000037445	-	100	78.000	Aotus_nancymaae
ENSMALG00000005486	prpf18	100	85.756	ENSACLG00000026296	prpf18	100	82.609	Astatotilapia_calliptera
ENSMALG00000005486	prpf18	100	80.168	ENSAMXG00000012848	prpf18	100	78.492	Astyanax_mexicanus
ENSMALG00000005486	prpf18	100	78.000	ENSBTAG00000017244	PRPF18	100	77.714	Bos_taurus
ENSMALG00000005486	prpf18	85	41.611	WBGene00009320	F32B6.3	83	39.661	Caenorhabditis_elegans
ENSMALG00000005486	prpf18	100	78.286	ENSCJAG00000009432	-	100	78.000	Callithrix_jacchus
ENSMALG00000005486	prpf18	100	78.000	ENSCAFG00000004735	-	100	77.714	Canis_familiaris
ENSMALG00000005486	prpf18	100	78.000	ENSCAFG00020007712	-	100	77.714	Canis_lupus_dingo
ENSMALG00000005486	prpf18	100	78.000	ENSCHIG00000000499	-	100	77.714	Capra_hircus
ENSMALG00000005486	prpf18	100	78.448	ENSTSYG00000003517	-	100	78.161	Carlito_syrichta
ENSMALG00000005486	prpf18	100	78.571	ENSCPOG00000021069	-	100	78.286	Cavia_porcellus
ENSMALG00000005486	prpf18	100	78.286	ENSCCAG00000036822	-	100	78.000	Cebus_capucinus
ENSMALG00000005486	prpf18	100	68.000	ENSCATG00000016633	-	100	67.714	Cercocebus_atys
ENSMALG00000005486	prpf18	100	78.000	ENSCLAG00000011770	-	100	77.714	Chinchilla_lanigera
ENSMALG00000005486	prpf18	100	78.028	ENSCSAG00000013109	-	100	77.746	Chlorocebus_sabaeus
ENSMALG00000005486	prpf18	100	74.373	ENSCPBG00000003100	-	100	74.652	Chrysemys_picta_bellii
ENSMALG00000005486	prpf18	99	52.542	ENSCING00000020481	-	97	51.977	Ciona_intestinalis
ENSMALG00000005486	prpf18	99	52.890	ENSCSAVG00000010546	-	99	50.986	Ciona_savignyi
ENSMALG00000005486	prpf18	100	78.571	ENSCANG00000034900	-	100	78.286	Colobus_angolensis_palliatus
ENSMALG00000005486	prpf18	100	78.223	ENSCGRG00001023665	Prpf18	100	77.937	Cricetulus_griseus_chok1gshd
ENSMALG00000005486	prpf18	100	78.223	ENSCGRG00000014690	Prpf18	100	77.937	Cricetulus_griseus_crigri
ENSMALG00000005486	prpf18	100	84.058	ENSCSEG00000005536	prpf18	100	82.249	Cynoglossus_semilaevis
ENSMALG00000005486	prpf18	100	84.884	ENSCVAG00000012401	prpf18	100	84.593	Cyprinodon_variegatus
ENSMALG00000005486	prpf18	100	83.815	ENSDARG00000058306	prpf18	100	83.237	Danio_rerio
ENSMALG00000005486	prpf18	100	78.286	ENSDNOG00000035607	-	100	78.000	Dasypus_novemcinctus
ENSMALG00000005486	prpf18	100	77.714	ENSDORG00000000858	Prpf18	100	77.429	Dipodomys_ordii
ENSMALG00000005486	prpf18	99	48.276	FBgn0027784	Prp18	98	46.974	Drosophila_melanogaster
ENSMALG00000005486	prpf18	100	73.547	ENSETEG00000015060	-	100	73.256	Echinops_telfairi
ENSMALG00000005486	prpf18	100	65.242	ENSEBUG00000016502	prpf18	99	63.533	Eptatretus_burgeri
ENSMALG00000005486	prpf18	100	78.286	ENSEASG00005019373	-	100	78.000	Equus_asinus_asinus
ENSMALG00000005486	prpf18	100	78.286	ENSECAG00000006997	PRPF18	100	78.000	Equus_caballus
ENSMALG00000005486	prpf18	92	45.342	ENSEEUG00000001171	-	100	45.342	Erinaceus_europaeus
ENSMALG00000005486	prpf18	100	80.980	ENSELUG00000022190	prpf18	100	80.692	Esox_lucius
ENSMALG00000005486	prpf18	100	77.714	ENSFCAG00000004436	-	100	77.429	Felis_catus
ENSMALG00000005486	prpf18	92	72.561	ENSFALG00000001912	-	97	72.923	Ficedula_albicollis
ENSMALG00000005486	prpf18	88	57.980	ENSFDAG00000010713	-	87	57.980	Fukomys_damarensis
ENSMALG00000005486	prpf18	85	86.780	ENSFDAG00000014026	-	92	86.441	Fukomys_damarensis
ENSMALG00000005486	prpf18	79	92.674	ENSFHEG00000020125	prpf18	98	92.135	Fundulus_heteroclitus
ENSMALG00000005486	prpf18	99	80.523	ENSGMOG00000012210	prpf18	99	80.523	Gadus_morhua
ENSMALG00000005486	prpf18	100	76.163	ENSGALG00000043593	-	100	75.581	Gallus_gallus
ENSMALG00000005486	prpf18	100	84.726	ENSGAFG00000006034	prpf18	100	84.241	Gambusia_affinis
ENSMALG00000005486	prpf18	100	83.090	ENSGACG00000012232	prpf18	100	82.899	Gasterosteus_aculeatus
ENSMALG00000005486	prpf18	100	78.551	ENSGAGG00000016878	-	100	78.261	Gopherus_agassizii
ENSMALG00000005486	prpf18	92	77.160	ENSGGOG00000025188	-	96	76.852	Gorilla_gorilla
ENSMALG00000005486	prpf18	100	85.756	ENSHBUG00000010264	prpf18	100	82.609	Haplochromis_burtoni
ENSMALG00000005486	prpf18	100	78.000	ENSHGLG00000018534	PRPF18	100	77.714	Heterocephalus_glaber_female
ENSMALG00000005486	prpf18	85	86.441	ENSHGLG00100012161	-	90	86.102	Heterocephalus_glaber_male
ENSMALG00000005486	prpf18	100	86.880	ENSHCOG00000015987	prpf18	100	86.880	Hippocampus_comes
ENSMALG00000005486	prpf18	100	76.204	ENSIPUG00000007432	prpf18	100	76.487	Ictalurus_punctatus
ENSMALG00000005486	prpf18	100	78.286	ENSSTOG00000008735	-	100	78.000	Ictidomys_tridecemlineatus
ENSMALG00000005486	prpf18	100	61.808	ENSJJAG00000015191	-	100	61.808	Jaculus_jaculus
ENSMALG00000005486	prpf18	100	78.571	ENSJJAG00000024041	-	100	78.286	Jaculus_jaculus
ENSMALG00000005486	prpf18	100	84.682	ENSKMAG00000012124	prpf18	100	84.393	Kryptolebias_marmoratus
ENSMALG00000005486	prpf18	100	81.633	ENSLBEG00000028466	prpf18	100	81.341	Labrus_bergylta
ENSMALG00000005486	prpf18	100	77.971	ENSLACG00000009885	prpf18	100	77.457	Latimeria_chalumnae
ENSMALG00000005486	prpf18	100	81.739	ENSLOCG00000016736	prpf18	100	80.870	Lepisosteus_oculatus
ENSMALG00000005486	prpf18	100	78.571	ENSLAFG00000007753	-	100	78.286	Loxodonta_africana
ENSMALG00000005486	prpf18	100	78.571	ENSMFAG00000000540	-	100	78.286	Macaca_fascicularis
ENSMALG00000005486	prpf18	100	78.571	ENSMMUG00000015071	PRPF18	91	92.617	Macaca_mulatta
ENSMALG00000005486	prpf18	100	78.571	ENSMNEG00000024679	-	100	78.286	Macaca_nemestrina
ENSMALG00000005486	prpf18	100	63.714	ENSMLEG00000031715	-	100	63.429	Mandrillus_leucophaeus
ENSMALG00000005486	prpf18	100	85.756	ENSMAMG00000006610	prpf18	100	85.465	Mastacembelus_armatus
ENSMALG00000005486	prpf18	100	85.756	ENSMZEG00005019392	prpf18	100	82.609	Maylandia_zebra
ENSMALG00000005486	prpf18	100	76.163	ENSMGAG00000005023	-	100	75.581	Meleagris_gallopavo
ENSMALG00000005486	prpf18	100	78.571	ENSMICG00000006572	-	100	78.286	Microcebus_murinus
ENSMALG00000005486	prpf18	100	78.571	ENSMOCG00000021468	Prpf18	100	78.286	Microtus_ochrogaster
ENSMALG00000005486	prpf18	100	84.348	ENSMMOG00000013012	prpf18	100	84.058	Mola_mola
ENSMALG00000005486	prpf18	92	75.692	ENSMODG00000016902	-	91	75.077	Monodelphis_domestica
ENSMALG00000005486	prpf18	100	70.725	ENSMODG00000024043	-	100	70.435	Monodelphis_domestica
ENSMALG00000005486	prpf18	100	78.261	MGP_CAROLIEiJ_G0023143	Prpf18	100	95.890	Mus_caroli
ENSMALG00000005486	prpf18	100	78.261	ENSMUSG00000039449	Prpf18	100	95.890	Mus_musculus
ENSMALG00000005486	prpf18	100	78.551	MGP_PahariEiJ_G0019203	Prpf18	100	95.890	Mus_pahari
ENSMALG00000005486	prpf18	100	78.261	MGP_SPRETEiJ_G0024061	Prpf18	100	95.890	Mus_spretus
ENSMALG00000005486	prpf18	100	78.000	ENSMPUG00000000938	-	100	77.714	Mustela_putorius_furo
ENSMALG00000005486	prpf18	100	77.971	ENSMLUG00000009200	-	100	77.681	Myotis_lucifugus
ENSMALG00000005486	prpf18	100	78.571	ENSNGAG00000012500	-	100	78.286	Nannospalax_galili
ENSMALG00000005486	prpf18	67	80.603	ENSNGAG00000023550	-	83	79.741	Nannospalax_galili
ENSMALG00000005486	prpf18	100	86.047	ENSNBRG00000001778	prpf18	100	82.899	Neolamprologus_brichardi
ENSMALG00000005486	prpf18	100	78.571	ENSNLEG00000012186	-	100	78.286	Nomascus_leucogenys
ENSMALG00000005486	prpf18	75	73.725	ENSMEUG00000005032	-	75	72.835	Notamacropus_eugenii
ENSMALG00000005486	prpf18	77	57.875	ENSOPRG00000002153	-	100	57.509	Ochotona_princeps
ENSMALG00000005486	prpf18	100	77.714	ENSODEG00000003770	-	100	77.429	Octodon_degus
ENSMALG00000005486	prpf18	98	85.460	ENSONIG00000014854	prpf18	96	82.493	Oreochromis_niloticus
ENSMALG00000005486	prpf18	100	77.746	ENSOANG00000015404	-	100	77.457	Ornithorhynchus_anatinus
ENSMALG00000005486	prpf18	100	78.286	ENSOCUG00000027756	-	86	86.441	Oryctolagus_cuniculus
ENSMALG00000005486	prpf18	100	83.714	ENSORLG00000010293	prpf18	100	83.429	Oryzias_latipes
ENSMALG00000005486	prpf18	100	85.217	ENSORLG00020001530	prpf18	100	84.928	Oryzias_latipes_hni
ENSMALG00000005486	prpf18	100	84.928	ENSORLG00015013705	prpf18	100	84.638	Oryzias_latipes_hsok
ENSMALG00000005486	prpf18	100	86.705	ENSOMEG00000009167	prpf18	100	85.217	Oryzias_melastigma
ENSMALG00000005486	prpf18	100	78.324	ENSOGAG00000007294	-	100	78.035	Otolemur_garnettii
ENSMALG00000005486	prpf18	100	77.465	ENSOARG00000006243	-	100	77.183	Ovis_aries
ENSMALG00000005486	prpf18	100	78.571	ENSPPAG00000041959	-	100	78.286	Pan_paniscus
ENSMALG00000005486	prpf18	100	77.714	ENSPPRG00000000107	-	100	77.429	Panthera_pardus
ENSMALG00000005486	prpf18	100	77.457	ENSPTIG00000021094	-	100	77.168	Panthera_tigris_altaica
ENSMALG00000005486	prpf18	100	78.571	ENSPTRG00000002306	PRPF18	100	78.286	Pan_troglodytes
ENSMALG00000005486	prpf18	100	78.286	ENSPANG00000023346	-	100	78.000	Papio_anubis
ENSMALG00000005486	prpf18	85	98.113	ENSPKIG00000014128	prpf18	96	78.348	Paramormyrops_kingsleyae
ENSMALG00000005486	prpf18	100	77.551	ENSPSIG00000016064	-	100	77.259	Pelodiscus_sinensis
ENSMALG00000005486	prpf18	100	82.789	ENSPMGG00000016486	prpf18	100	82.789	Periophthalmus_magnuspinnatus
ENSMALG00000005486	prpf18	100	78.510	ENSPEMG00000013704	Prpf18	100	78.223	Peromyscus_maniculatus_bairdii
ENSMALG00000005486	prpf18	100	68.696	ENSPMAG00000000204	prpf18	100	68.406	Petromyzon_marinus
ENSMALG00000005486	prpf18	92	76.562	ENSPCIG00000012963	-	99	76.250	Phascolarctos_cinereus
ENSMALG00000005486	prpf18	100	82.436	ENSPFOG00000017611	prpf18	100	82.153	Poecilia_formosa
ENSMALG00000005486	prpf18	100	84.104	ENSPLAG00000000369	prpf18	100	83.815	Poecilia_latipinna
ENSMALG00000005486	prpf18	100	84.393	ENSPMEG00000005183	prpf18	100	84.104	Poecilia_mexicana
ENSMALG00000005486	prpf18	100	83.381	ENSPREG00000015232	prpf18	100	83.095	Poecilia_reticulata
ENSMALG00000005486	prpf18	100	78.286	ENSPPYG00000002101	PRPF18	100	78.000	Pongo_abelii
ENSMALG00000005486	prpf18	100	61.143	ENSPCAG00000010833	-	100	60.857	Procavia_capensis
ENSMALG00000005486	prpf18	100	77.907	ENSPCOG00000013057	-	100	77.616	Propithecus_coquereli
ENSMALG00000005486	prpf18	100	47.965	ENSPVAG00000002947	-	100	47.965	Pteropus_vampyrus
ENSMALG00000005486	prpf18	100	86.047	ENSPNYG00000003554	prpf18	100	82.899	Pundamilia_nyererei
ENSMALG00000005486	prpf18	100	80.912	ENSPNAG00000023151	prpf18	100	80.627	Pygocentrus_nattereri
ENSMALG00000005486	prpf18	100	78.223	ENSRNOG00000018396	Prpf18	100	77.937	Rattus_norvegicus
ENSMALG00000005486	prpf18	100	78.571	ENSRBIG00000028028	-	100	78.286	Rhinopithecus_bieti
ENSMALG00000005486	prpf18	100	78.571	ENSRROG00000040695	-	100	78.286	Rhinopithecus_roxellana
ENSMALG00000005486	prpf18	100	78.286	ENSSBOG00000034482	-	100	78.000	Saimiri_boliviensis_boliviensis
ENSMALG00000005486	prpf18	100	77.746	ENSSHAG00000016463	-	100	77.457	Sarcophilus_harrisii
ENSMALG00000005486	prpf18	100	65.015	ENSSHAG00000009669	-	100	64.723	Sarcophilus_harrisii
ENSMALG00000005486	prpf18	100	77.035	ENSSFOG00015022118	prpf18	100	77.035	Scleropages_formosus
ENSMALG00000005486	prpf18	67	50.885	ENSSFOG00015021154	-	89	50.000	Scleropages_formosus
ENSMALG00000005486	prpf18	100	83.478	ENSSMAG00000005308	prpf18	100	83.478	Scophthalmus_maximus
ENSMALG00000005486	prpf18	100	88.081	ENSSDUG00000015428	prpf18	100	87.791	Seriola_dumerili
ENSMALG00000005486	prpf18	100	87.791	ENSSLDG00000023989	prpf18	100	87.500	Seriola_lalandi_dorsalis
ENSMALG00000005486	prpf18	100	50.571	ENSSARG00000005307	-	100	48.563	Sorex_araneus
ENSMALG00000005486	prpf18	100	77.457	ENSSPUG00000002619	-	100	77.168	Sphenodon_punctatus
ENSMALG00000005486	prpf18	100	86.919	ENSSPAG00000019502	prpf18	100	86.919	Stegastes_partitus
ENSMALG00000005486	prpf18	100	78.000	ENSSSCG00000026354	-	100	77.714	Sus_scrofa
ENSMALG00000005486	prpf18	100	76.676	ENSTGUG00000002286	-	100	76.093	Taeniopygia_guttata
ENSMALG00000005486	prpf18	100	81.844	ENSTRUG00000011278	prpf18	100	79.251	Takifugu_rubripes
ENSMALG00000005486	prpf18	100	82.558	ENSTNIG00000000911	prpf18	100	82.558	Tetraodon_nigroviridis
ENSMALG00000005486	prpf18	79	98.718	ENSTBEG00000013011	-	74	98.718	Tupaia_belangeri
ENSMALG00000005486	prpf18	100	78.857	ENSTTRG00000011117	PRPF18	100	78.571	Tursiops_truncatus
ENSMALG00000005486	prpf18	85	86.441	ENSUAMG00000001815	-	88	86.102	Ursus_americanus
ENSMALG00000005486	prpf18	100	73.429	ENSUMAG00000012329	-	100	73.143	Ursus_maritimus
ENSMALG00000005486	prpf18	100	72.857	ENSVPAG00000011486	-	100	72.571	Vicugna_pacos
ENSMALG00000005486	prpf18	100	78.000	ENSVVUG00000005453	-	100	77.714	Vulpes_vulpes
ENSMALG00000005486	prpf18	100	70.201	ENSXETG00000024057	prpf18	100	70.145	Xenopus_tropicalis
ENSMALG00000005486	prpf18	100	83.429	ENSXCOG00000020414	prpf18	100	83.143	Xiphophorus_couchianus
ENSMALG00000005486	prpf18	100	84.393	ENSXMAG00000004713	prpf18	91	84.104	Xiphophorus_maculatus