EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000005725 (Gene tree)
Gene ID: 109970066
Gene Symbol: snrnp48
Alias: fd10a06|wu:fd10a06
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 9898 bases
Position: chrKV884877.1:1227039-1236936
Accession: 109970066
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000008044	zf-U11-48K	PF05253.12	3.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000008217	-	5228	XM_020617385	ENSMALP00000008044	335 (aa)	XP_020473041	UPI0009B45045

Gene Model

Click here to download ENSMALG00000005725's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000005725's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000005725	snrnp48	79	47.826	ENSG00000168566	SNRNP48	74	49.606	Homo_sapiens
ENSMALG00000005725	snrnp48	95	79.503	ENSAPOG00000021430	snrnp48	95	79.503	Acanthochromis_polyacanthus
ENSMALG00000005725	snrnp48	95	45.930	ENSAMEG00000017349	SNRNP48	73	51.383	Ailuropoda_melanoleuca
ENSMALG00000005725	snrnp48	93	73.101	ENSACIG00000002032	snrnp48	95	73.209	Amphilophus_citrinellus
ENSMALG00000005725	snrnp48	95	78.261	ENSAOCG00000010562	snrnp48	95	78.261	Amphiprion_ocellaris
ENSMALG00000005725	snrnp48	95	78.261	ENSAPEG00000003231	snrnp48	95	78.261	Amphiprion_percula
ENSMALG00000005725	snrnp48	93	82.278	ENSATEG00000020210	snrnp48	94	82.911	Anabas_testudineus
ENSMALG00000005725	snrnp48	81	49.141	ENSACAG00000002811	SNRNP48	64	54.545	Anolis_carolinensis
ENSMALG00000005725	snrnp48	80	46.975	ENSANAG00000033538	SNRNP48	74	50.000	Aotus_nancymaae
ENSMALG00000005725	snrnp48	94	58.044	ENSAMXG00000015309	snrnp48	79	63.218	Astyanax_mexicanus
ENSMALG00000005725	snrnp48	91	44.311	ENSBTAG00000001123	SNRNP48	81	48.387	Bos_taurus
ENSMALG00000005725	snrnp48	81	47.163	ENSCJAG00000021330	SNRNP48	75	50.196	Callithrix_jacchus
ENSMALG00000005725	snrnp48	95	45.345	ENSCAFG00000009574	SNRNP48	65	48.864	Canis_familiaris
ENSMALG00000005725	snrnp48	95	45.345	ENSCAFG00020013203	SNRNP48	77	48.864	Canis_lupus_dingo
ENSMALG00000005725	snrnp48	91	44.910	ENSCHIG00000015216	SNRNP48	81	49.462	Capra_hircus
ENSMALG00000005725	snrnp48	79	47.826	ENSTSYG00000000698	SNRNP48	79	48.708	Carlito_syrichta
ENSMALG00000005725	snrnp48	82	46.831	ENSCAPG00000006768	SNRNP48	90	46.763	Cavia_aperea
ENSMALG00000005725	snrnp48	95	42.647	ENSCPOG00000007910	SNRNP48	96	44.817	Cavia_porcellus
ENSMALG00000005725	snrnp48	82	47.535	ENSCCAG00000035652	SNRNP48	74	50.394	Cebus_capucinus
ENSMALG00000005725	snrnp48	85	46.128	ENSCATG00000033947	SNRNP48	83	42.857	Cercocebus_atys
ENSMALG00000005725	snrnp48	82	47.183	ENSCLAG00000003765	SNRNP48	74	51.181	Chinchilla_lanigera
ENSMALG00000005725	snrnp48	80	47.687	ENSCSAG00000007409	SNRNP48	74	50.000	Chlorocebus_sabaeus
ENSMALG00000005725	snrnp48	83	47.333	ENSCPBG00000019146	SNRNP48	65	55.714	Chrysemys_picta_bellii
ENSMALG00000005725	snrnp48	80	46.975	ENSCANG00000030017	SNRNP48	74	50.000	Colobus_angolensis_palliatus
ENSMALG00000005725	snrnp48	82	41.608	ENSCGRG00001008805	-	73	44.068	Cricetulus_griseus_chok1gshd
ENSMALG00000005725	snrnp48	95	42.308	ENSCGRG00001001076	-	75	49.606	Cricetulus_griseus_chok1gshd
ENSMALG00000005725	snrnp48	95	42.308	ENSCGRG00000007781	Snrnp48	75	49.606	Cricetulus_griseus_crigri
ENSMALG00000005725	snrnp48	93	71.154	ENSCSEG00000000722	snrnp48	89	71.521	Cynoglossus_semilaevis
ENSMALG00000005725	snrnp48	93	72.642	ENSCVAG00000019829	snrnp48	71	76.534	Cyprinodon_variegatus
ENSMALG00000005725	snrnp48	94	52.454	ENSDARG00000039989	snrnp48	81	55.273	Danio_rerio
ENSMALG00000005725	snrnp48	82	47.766	ENSDNOG00000014978	SNRNP48	91	44.444	Dasypus_novemcinctus
ENSMALG00000005725	snrnp48	93	44.012	ENSDORG00000015140	Snrnp48	73	50.800	Dipodomys_ordii
ENSMALG00000005725	snrnp48	79	49.638	ENSEASG00005012021	SNRNP48	73	52.209	Equus_asinus_asinus
ENSMALG00000005725	snrnp48	80	48.399	ENSECAG00000026937	SNRNP48	74	50.787	Equus_caballus
ENSMALG00000005725	snrnp48	73	32.549	ENSEEUG00000015437	SNRNP48	75	33.333	Erinaceus_europaeus
ENSMALG00000005725	snrnp48	93	60.534	ENSELUG00000009766	snrnp48	78	63.669	Esox_lucius
ENSMALG00000005725	snrnp48	80	48.227	ENSFCAG00000018853	SNRNP48	74	50.588	Felis_catus
ENSMALG00000005725	snrnp48	81	50.515	ENSFALG00000007797	SNRNP48	65	57.767	Ficedula_albicollis
ENSMALG00000005725	snrnp48	79	48.913	ENSFDAG00000009231	SNRNP48	74	49.606	Fukomys_damarensis
ENSMALG00000005725	snrnp48	66	83.036	ENSFHEG00000014647	snrnp48	95	82.545	Fundulus_heteroclitus
ENSMALG00000005725	snrnp48	90	62.696	ENSGMOG00000018599	-	84	69.776	Gadus_morhua
ENSMALG00000005725	snrnp48	77	51.311	ENSGALG00000013005	SNRNP48	69	57.767	Gallus_gallus
ENSMALG00000005725	snrnp48	95	74.006	ENSGAFG00000021639	snrnp48	96	70.732	Gambusia_affinis
ENSMALG00000005725	snrnp48	73	80.321	ENSGACG00000017756	-	77	79.767	Gasterosteus_aculeatus
ENSMALG00000005725	snrnp48	84	47.020	ENSGAGG00000000865	SNRNP48	68	55.238	Gopherus_agassizii
ENSMALG00000005725	snrnp48	80	46.975	ENSGGOG00000013220	SNRNP48	74	50.000	Gorilla_gorilla
ENSMALG00000005725	snrnp48	93	79.495	ENSHBUG00000017066	snrnp48	94	79.503	Haplochromis_burtoni
ENSMALG00000005725	snrnp48	82	46.479	ENSHGLG00000015241	SNRNP48	74	48.819	Heterocephalus_glaber_female
ENSMALG00000005725	snrnp48	82	46.479	ENSHGLG00100010027	SNRNP48	74	48.819	Heterocephalus_glaber_male
ENSMALG00000005725	snrnp48	75	74.603	ENSHCOG00000014066	snrnp48	82	70.567	Hippocampus_comes
ENSMALG00000005725	snrnp48	80	48.043	ENSSTOG00000014635	SNRNP48	74	50.394	Ictidomys_tridecemlineatus
ENSMALG00000005725	snrnp48	83	46.528	ENSJJAG00000011495	Snrnp48	74	49.213	Jaculus_jaculus
ENSMALG00000005725	snrnp48	95	74.303	ENSKMAG00000016514	snrnp48	95	74.613	Kryptolebias_marmoratus
ENSMALG00000005725	snrnp48	95	79.439	ENSLBEG00000026249	snrnp48	95	79.439	Labrus_bergylta
ENSMALG00000005725	snrnp48	95	48.640	ENSLACG00000003958	SNRNP48	79	51.481	Latimeria_chalumnae
ENSMALG00000005725	snrnp48	83	58.803	ENSLOCG00000004187	snrnp48	80	58.456	Lepisosteus_oculatus
ENSMALG00000005725	snrnp48	74	50.000	ENSLAFG00000011152	SNRNP48	74	50.196	Loxodonta_africana
ENSMALG00000005725	snrnp48	80	46.975	ENSMFAG00000045216	SNRNP48	83	42.857	Macaca_fascicularis
ENSMALG00000005725	snrnp48	80	46.975	ENSMMUG00000014785	SNRNP48	74	50.000	Macaca_mulatta
ENSMALG00000005725	snrnp48	80	46.975	ENSMNEG00000042269	SNRNP48	74	50.000	Macaca_nemestrina
ENSMALG00000005725	snrnp48	80	46.975	ENSMLEG00000034004	SNRNP48	83	42.857	Mandrillus_leucophaeus
ENSMALG00000005725	snrnp48	95	77.500	ENSMAMG00000018673	snrnp48	83	77.500	Mastacembelus_armatus
ENSMALG00000005725	snrnp48	82	48.649	ENSMGAG00000006037	SNRNP48	69	58.252	Meleagris_gallopavo
ENSMALG00000005725	snrnp48	95	41.379	ENSMAUG00000011944	Snrnp48	78	48.289	Mesocricetus_auratus
ENSMALG00000005725	snrnp48	80	47.518	ENSMICG00000012497	SNRNP48	74	50.588	Microcebus_murinus
ENSMALG00000005725	snrnp48	95	42.651	ENSMOCG00000015555	Snrnp48	78	49.242	Microtus_ochrogaster
ENSMALG00000005725	snrnp48	58	86.082	ENSMMOG00000003072	-	61	86.082	Mola_mola
ENSMALG00000005725	snrnp48	83	46.599	ENSMODG00000009996	SNRNP48	69	48.627	Monodelphis_domestica
ENSMALG00000005725	snrnp48	95	42.690	MGP_CAROLIEiJ_G0018441	Snrnp48	75	49.609	Mus_caroli
ENSMALG00000005725	snrnp48	82	47.183	ENSMUSG00000021431	Snrnp48	75	48.828	Mus_musculus
ENSMALG00000005725	snrnp48	82	47.887	MGP_PahariEiJ_G0019509	Snrnp48	76	49.035	Mus_pahari
ENSMALG00000005725	snrnp48	82	47.183	MGP_SPRETEiJ_G0019321	Snrnp48	75	48.828	Mus_spretus
ENSMALG00000005725	snrnp48	95	44.083	ENSNGAG00000004849	Snrnp48	74	50.787	Nannospalax_galili
ENSMALG00000005725	snrnp48	93	79.495	ENSNBRG00000012127	snrnp48	94	79.503	Neolamprologus_brichardi
ENSMALG00000005725	snrnp48	79	48.188	ENSNLEG00000011667	SNRNP48	74	50.000	Nomascus_leucogenys
ENSMALG00000005725	snrnp48	82	46.290	ENSOPRG00000015471	SNRNP48	80	48.062	Ochotona_princeps
ENSMALG00000005725	snrnp48	93	79.811	ENSONIG00000001520	snrnp48	94	79.814	Oreochromis_niloticus
ENSMALG00000005725	snrnp48	54	38.164	ENSOANG00000019888	-	99	39.130	Ornithorhynchus_anatinus
ENSMALG00000005725	snrnp48	78	47.653	ENSOCUG00000005168	SNRNP48	83	51.181	Oryctolagus_cuniculus
ENSMALG00000005725	snrnp48	88	75.421	ENSORLG00000015654	snrnp48	94	74.923	Oryzias_latipes
ENSMALG00000005725	snrnp48	88	74.411	ENSORLG00020015976	snrnp48	80	73.292	Oryzias_latipes_hni
ENSMALG00000005725	snrnp48	88	74.747	ENSORLG00015022379	snrnp48	80	73.602	Oryzias_latipes_hsok
ENSMALG00000005725	snrnp48	93	74.843	ENSOMEG00000022007	snrnp48	94	75.232	Oryzias_melastigma
ENSMALG00000005725	snrnp48	81	47.552	ENSOGAG00000005275	SNRNP48	78	49.807	Otolemur_garnettii
ENSMALG00000005725	snrnp48	82	47.405	ENSOARG00000017319	SNRNP48	78	53.509	Ovis_aries
ENSMALG00000005725	snrnp48	79	48.188	ENSPPAG00000032873	SNRNP48	74	50.000	Pan_paniscus
ENSMALG00000005725	snrnp48	79	49.097	ENSPPRG00000004283	SNRNP48	73	51.600	Panthera_pardus
ENSMALG00000005725	snrnp48	68	51.724	ENSPTIG00000013502	SNRNP48	70	55.122	Panthera_tigris_altaica
ENSMALG00000005725	snrnp48	79	48.188	ENSPTRG00000017703	SNRNP48	74	50.000	Pan_troglodytes
ENSMALG00000005725	snrnp48	80	46.975	ENSPANG00000000771	SNRNP48	83	42.857	Papio_anubis
ENSMALG00000005725	snrnp48	89	54.434	ENSPKIG00000013703	snrnp48	58	58.909	Paramormyrops_kingsleyae
ENSMALG00000005725	snrnp48	81	45.608	ENSPSIG00000002213	SNRNP48	91	46.392	Pelodiscus_sinensis
ENSMALG00000005725	snrnp48	76	67.557	ENSPMGG00000008120	snrnp48	93	67.557	Periophthalmus_magnuspinnatus
ENSMALG00000005725	snrnp48	95	43.195	ENSPEMG00000008872	Snrnp48	96	45.706	Peromyscus_maniculatus_bairdii
ENSMALG00000005725	snrnp48	95	76.147	ENSPFOG00000003578	snrnp48	96	72.866	Poecilia_formosa
ENSMALG00000005725	snrnp48	76	73.333	ENSPLAG00000002290	snrnp48	95	72.464	Poecilia_latipinna
ENSMALG00000005725	snrnp48	95	76.147	ENSPMEG00000018033	snrnp48	96	72.866	Poecilia_mexicana
ENSMALG00000005725	snrnp48	95	74.618	ENSPREG00000018541	snrnp48	96	71.646	Poecilia_reticulata
ENSMALG00000005725	snrnp48	80	46.619	ENSPPYG00000016209	SNRNP48	74	49.606	Pongo_abelii
ENSMALG00000005725	snrnp48	69	36.992	ENSPCAG00000011991	SNRNP48	94	37.984	Procavia_capensis
ENSMALG00000005725	snrnp48	80	47.857	ENSPVAG00000002854	SNRNP48	77	50.190	Pteropus_vampyrus
ENSMALG00000005725	snrnp48	92	80.128	ENSPNYG00000015399	snrnp48	89	81.227	Pundamilia_nyererei
ENSMALG00000005725	snrnp48	95	43.567	ENSRNOG00000013756	Snrnp48	96	45.399	Rattus_norvegicus
ENSMALG00000005725	snrnp48	79	48.188	ENSRBIG00000043856	SNRNP48	87	47.826	Rhinopithecus_bieti
ENSMALG00000005725	snrnp48	80	46.975	ENSRROG00000043229	SNRNP48	74	50.000	Rhinopithecus_roxellana
ENSMALG00000005725	snrnp48	80	47.331	ENSSBOG00000019486	SNRNP48	74	50.394	Saimiri_boliviensis_boliviensis
ENSMALG00000005725	snrnp48	83	46.622	ENSSHAG00000014483	SNRNP48	73	48.638	Sarcophilus_harrisii
ENSMALG00000005725	snrnp48	73	60.547	ENSSFOG00015006610	snrnp48	66	58.719	Scleropages_formosus
ENSMALG00000005725	snrnp48	95	82.445	ENSSDUG00000014953	snrnp48	95	82.188	Seriola_dumerili
ENSMALG00000005725	snrnp48	95	81.931	ENSSLDG00000005989	snrnp48	95	81.677	Seriola_lalandi_dorsalis
ENSMALG00000005725	snrnp48	78	48.561	ENSSPUG00000006257	SNRNP48	59	54.286	Sphenodon_punctatus
ENSMALG00000005725	snrnp48	95	80.805	ENSSPAG00000006454	snrnp48	96	80.805	Stegastes_partitus
ENSMALG00000005725	snrnp48	81	50.000	ENSTGUG00000007575	SNRNP48	65	57.767	Taeniopygia_guttata
ENSMALG00000005725	snrnp48	95	65.217	ENSTRUG00000007031	snrnp48	82	71.636	Takifugu_rubripes
ENSMALG00000005725	snrnp48	99	64.688	ENSTNIG00000012977	-	77	72.549	Tetraodon_nigroviridis
ENSMALG00000005725	snrnp48	73	51.751	ENSTBEG00000015620	SNRNP48	75	50.787	Tupaia_belangeri
ENSMALG00000005725	snrnp48	91	44.172	ENSTTRG00000016715	SNRNP48	81	48.551	Tursiops_truncatus
ENSMALG00000005725	snrnp48	95	46.687	ENSUAMG00000003690	SNRNP48	74	51.383	Ursus_americanus
ENSMALG00000005725	snrnp48	70	51.046	ENSVPAG00000003557	SNRNP48	74	53.488	Vicugna_pacos
ENSMALG00000005725	snrnp48	94	45.482	ENSVVUG00000004996	SNRNP48	74	49.802	Vulpes_vulpes
ENSMALG00000005725	snrnp48	90	46.205	ENSXETG00000020447	snrnp48	71	50.833	Xenopus_tropicalis
ENSMALG00000005725	snrnp48	70	77.731	ENSXCOG00000004478	snrnp48	95	67.477	Xiphophorus_couchianus
ENSMALG00000005725	snrnp48	95	74.618	ENSXMAG00000013595	snrnp48	96	71.341	Xiphophorus_maculatus