EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000005930 (Gene tree)
Gene ID: 109962549
Gene Symbol: usb1
Alias: zgc:91896
Full Name: U6 snRNA biogenesis phosphodiesterase 1
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 4046 bases
Position: chrKV884753.1:1662346-1666391
Accession: 109962549
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000008353	HVSL	PF09749.9	8.5e-63	1	1
ENSMALP00000008338	HVSL	PF09749.9	9.6e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000008514	-	1752	XM_020604382	ENSMALP00000008338	293 (aa)	XP_020460038	UPI0009B4E4BB
ENSMALT00000008529	-	1146	XM_020604383	ENSMALP00000008353	282 (aa)	XP_020460039	UPI0009B455E1

Gene Model

Click here to download ENSMALG00000005930's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000005930's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000005930	usb1	80	52.423	ENSG00000103005	USB1	100	52.804	Homo_sapiens
ENSMALG00000005930	usb1	99	71.174	ENSAPOG00000011942	usb1	99	70.819	Acanthochromis_polyacanthus
ENSMALG00000005930	usb1	99	48.399	ENSAMEG00000017205	USB1	89	51.230	Ailuropoda_melanoleuca
ENSMALG00000005930	usb1	84	77.215	ENSACIG00000012234	usb1	87	77.215	Amphilophus_citrinellus
ENSMALG00000005930	usb1	99	74.205	ENSAOCG00000014831	usb1	99	71.886	Amphiprion_ocellaris
ENSMALG00000005930	usb1	99	73.498	ENSAPEG00000000296	usb1	99	71.174	Amphiprion_percula
ENSMALG00000005930	usb1	99	81.851	ENSATEG00000009348	usb1	99	81.851	Anabas_testudineus
ENSMALG00000005930	usb1	79	56.000	ENSAPLG00000002756	USB1	99	56.000	Anas_platyrhynchos
ENSMALG00000005930	usb1	80	50.000	ENSACAG00000015481	USB1	99	50.000	Anolis_carolinensis
ENSMALG00000005930	usb1	80	52.423	ENSANAG00000035640	USB1	94	49.398	Aotus_nancymaae
ENSMALG00000005930	usb1	100	72.183	ENSACLG00000020586	usb1	100	71.831	Astatotilapia_calliptera
ENSMALG00000005930	usb1	79	62.054	ENSAMXG00000040146	usb1	74	62.054	Astyanax_mexicanus
ENSMALG00000005930	usb1	99	46.975	ENSBTAG00000015758	USB1	95	50.199	Bos_taurus
ENSMALG00000005930	usb1	80	52.863	ENSCJAG00000011733	USB1	95	49.402	Callithrix_jacchus
ENSMALG00000005930	usb1	82	52.586	ENSCAFG00000008556	USB1	64	51.440	Canis_familiaris
ENSMALG00000005930	usb1	99	48.214	ENSCAFG00020009263	USB1	85	53.982	Canis_lupus_dingo
ENSMALG00000005930	usb1	99	46.975	ENSCHIG00000024290	USB1	94	50.602	Capra_hircus
ENSMALG00000005930	usb1	80	52.863	ENSTSYG00000006997	USB1	95	49.801	Carlito_syrichta
ENSMALG00000005930	usb1	79	43.750	ENSCAPG00000009057	USB1	96	43.750	Cavia_aperea
ENSMALG00000005930	usb1	99	48.754	ENSCPOG00000014325	USB1	83	54.464	Cavia_porcellus
ENSMALG00000005930	usb1	80	52.423	ENSCCAG00000022132	USB1	94	49.398	Cebus_capucinus
ENSMALG00000005930	usb1	80	53.304	ENSCATG00000032174	USB1	94	50.201	Cercocebus_atys
ENSMALG00000005930	usb1	61	54.023	ENSCLAG00000007363	USB1	99	54.023	Chinchilla_lanigera
ENSMALG00000005930	usb1	80	53.304	ENSCSAG00000004783	USB1	94	50.201	Chlorocebus_sabaeus
ENSMALG00000005930	usb1	82	54.978	ENSCPBG00000026943	USB1	90	52.000	Chrysemys_picta_bellii
ENSMALG00000005930	usb1	79	33.476	ENSCING00000011490	-	87	33.476	Ciona_intestinalis
ENSMALG00000005930	usb1	82	32.231	ENSCSAVG00000000894	-	89	31.765	Ciona_savignyi
ENSMALG00000005930	usb1	81	52.814	ENSCANG00000037135	USB1	95	50.199	Colobus_angolensis_palliatus
ENSMALG00000005930	usb1	99	48.043	ENSCGRG00001011243	USB1	85	52.863	Cricetulus_griseus_chok1gshd
ENSMALG00000005930	usb1	99	48.043	ENSCGRG00000013252	USB1	85	52.863	Cricetulus_griseus_crigri
ENSMALG00000005930	usb1	99	66.548	ENSCSEG00000013881	usb1	99	66.548	Cynoglossus_semilaevis
ENSMALG00000005930	usb1	79	72.687	ENSCVAG00000009252	usb1	97	72.687	Cyprinodon_variegatus
ENSMALG00000005930	usb1	86	57.202	ENSDARG00000003841	usb1	87	57.202	Danio_rerio
ENSMALG00000005930	usb1	83	49.153	ENSDORG00000001888	Usb1	95	47.809	Dipodomys_ordii
ENSMALG00000005930	usb1	83	37.652	FBgn0037713	CG16790	92	37.652	Drosophila_melanogaster
ENSMALG00000005930	usb1	99	41.053	ENSETEG00000019682	USB1	95	41.732	Echinops_telfairi
ENSMALG00000005930	usb1	90	42.963	ENSEBUG00000005889	usb1	86	43.123	Eptatretus_burgeri
ENSMALG00000005930	usb1	99	49.110	ENSEASG00005005484	USB1	95	50.598	Equus_asinus_asinus
ENSMALG00000005930	usb1	99	49.286	ENSECAG00000019493	USB1	86	50.800	Equus_caballus
ENSMALG00000005930	usb1	61	50.000	ENSEEUG00000000154	USB1	66	50.000	Erinaceus_europaeus
ENSMALG00000005930	usb1	83	61.603	ENSELUG00000010974	usb1	87	61.603	Esox_lucius
ENSMALG00000005930	usb1	86	50.410	ENSFCAG00000002693	USB1	96	48.627	Felis_catus
ENSMALG00000005930	usb1	81	54.506	ENSFALG00000006876	USB1	92	52.988	Ficedula_albicollis
ENSMALG00000005930	usb1	99	47.687	ENSFDAG00000010052	USB1	84	53.125	Fukomys_damarensis
ENSMALG00000005930	usb1	88	65.323	ENSFHEG00000012334	usb1	86	70.561	Fundulus_heteroclitus
ENSMALG00000005930	usb1	79	70.404	ENSGMOG00000004228	usb1	100	70.404	Gadus_morhua
ENSMALG00000005930	usb1	78	54.709	ENSGALG00000035604	USB1	93	51.004	Gallus_gallus
ENSMALG00000005930	usb1	100	69.965	ENSGAFG00000021890	usb1	90	73.494	Gambusia_affinis
ENSMALG00000005930	usb1	99	74.021	ENSGACG00000003257	usb1	99	74.377	Gasterosteus_aculeatus
ENSMALG00000005930	usb1	99	52.500	ENSGAGG00000022572	USB1	90	53.629	Gopherus_agassizii
ENSMALG00000005930	usb1	80	52.863	ENSGGOG00000017147	USB1	95	49.402	Gorilla_gorilla
ENSMALG00000005930	usb1	100	75.265	ENSHBUG00000009823	usb1	100	75.265	Haplochromis_burtoni
ENSMALG00000005930	usb1	99	48.214	ENSHGLG00000016078	USB1	83	53.097	Heterocephalus_glaber_female
ENSMALG00000005930	usb1	99	48.214	ENSHGLG00100005562	USB1	83	53.097	Heterocephalus_glaber_male
ENSMALG00000005930	usb1	77	71.560	ENSHCOG00000015633	usb1	87	71.875	Hippocampus_comes
ENSMALG00000005930	usb1	99	53.819	ENSIPUG00000008601	usb1	83	59.244	Ictalurus_punctatus
ENSMALG00000005930	usb1	99	49.822	ENSSTOG00000007548	USB1	83	53.744	Ictidomys_tridecemlineatus
ENSMALG00000005930	usb1	99	49.466	ENSJJAG00000021859	Usb1	85	55.066	Jaculus_jaculus
ENSMALG00000005930	usb1	99	69.204	ENSKMAG00000007200	usb1	84	77.311	Kryptolebias_marmoratus
ENSMALG00000005930	usb1	90	67.054	ENSLBEG00000008452	usb1	79	68.110	Labrus_bergylta
ENSMALG00000005930	usb1	80	49.565	ENSLACG00000000105	USB1	80	50.435	Latimeria_chalumnae
ENSMALG00000005930	usb1	99	50.530	ENSLOCG00000000465	usb1	99	50.530	Lepisosteus_oculatus
ENSMALG00000005930	usb1	99	38.621	ENSLAFG00000002267	USB1	83	43.290	Loxodonta_africana
ENSMALG00000005930	usb1	80	53.304	ENSMFAG00000003926	USB1	94	50.201	Macaca_fascicularis
ENSMALG00000005930	usb1	80	53.304	ENSMMUG00000022669	USB1	94	50.201	Macaca_mulatta
ENSMALG00000005930	usb1	80	52.863	ENSMNEG00000042487	USB1	94	49.799	Macaca_nemestrina
ENSMALG00000005930	usb1	80	53.304	ENSMLEG00000028756	USB1	94	50.201	Mandrillus_leucophaeus
ENSMALG00000005930	usb1	99	78.648	ENSMAMG00000015092	usb1	99	77.224	Mastacembelus_armatus
ENSMALG00000005930	usb1	100	74.205	ENSMZEG00005010008	usb1	100	74.205	Maylandia_zebra
ENSMALG00000005930	usb1	99	47.331	ENSMAUG00000007832	Usb1	95	48.221	Mesocricetus_auratus
ENSMALG00000005930	usb1	80	54.185	ENSMICG00000004900	USB1	95	50.598	Microcebus_murinus
ENSMALG00000005930	usb1	99	48.754	ENSMOCG00000022647	Usb1	85	53.304	Microtus_ochrogaster
ENSMALG00000005930	usb1	84	73.444	ENSMMOG00000000490	usb1	88	76.444	Mola_mola
ENSMALG00000005930	usb1	77	52.535	ENSMODG00000014067	USB1	90	49.402	Monodelphis_domestica
ENSMALG00000005930	usb1	99	47.331	MGP_CAROLIEiJ_G0031421	Usb1	99	48.214	Mus_caroli
ENSMALG00000005930	usb1	99	48.043	ENSMUSG00000031792	Usb1	99	48.214	Mus_musculus
ENSMALG00000005930	usb1	80	51.316	MGP_PahariEiJ_G0023019	Usb1	100	49.573	Mus_pahari
ENSMALG00000005930	usb1	99	48.043	MGP_SPRETEiJ_G0032540	Usb1	85	51.316	Mus_spretus
ENSMALG00000005930	usb1	99	48.399	ENSMPUG00000004684	USB1	85	50.820	Mustela_putorius_furo
ENSMALG00000005930	usb1	80	55.507	ENSMLUG00000007400	USB1	98	55.507	Myotis_lucifugus
ENSMALG00000005930	usb1	99	49.466	ENSNGAG00000009703	Usb1	91	51.230	Nannospalax_galili
ENSMALG00000005930	usb1	100	69.258	ENSNBRG00000008747	usb1	100	73.364	Neolamprologus_brichardi
ENSMALG00000005930	usb1	73	53.846	ENSNLEG00000003340	USB1	93	50.000	Nomascus_leucogenys
ENSMALG00000005930	usb1	99	48.582	ENSODEG00000016214	USB1	91	52.263	Octodon_degus
ENSMALG00000005930	usb1	99	75.177	ENSONIG00000011063	usb1	100	72.954	Oreochromis_niloticus
ENSMALG00000005930	usb1	79	54.222	ENSOANG00000012118	USB1	94	54.222	Ornithorhynchus_anatinus
ENSMALG00000005930	usb1	93	72.031	ENSORLG00000012479	usb1	100	69.858	Oryzias_latipes
ENSMALG00000005930	usb1	93	71.264	ENSORLG00020018671	usb1	94	71.429	Oryzias_latipes_hni
ENSMALG00000005930	usb1	93	72.414	ENSORLG00015009679	usb1	94	72.481	Oryzias_latipes_hsok
ENSMALG00000005930	usb1	100	74.823	ENSOMEG00000012930	usb1	100	73.759	Oryzias_melastigma
ENSMALG00000005930	usb1	80	51.542	ENSOGAG00000003273	USB1	85	51.542	Otolemur_garnettii
ENSMALG00000005930	usb1	84	52.101	ENSOARG00000001107	USB1	91	52.101	Ovis_aries
ENSMALG00000005930	usb1	80	52.423	ENSPPAG00000042137	USB1	95	49.004	Pan_paniscus
ENSMALG00000005930	usb1	99	48.043	ENSPPRG00000024797	USB1	96	48.627	Panthera_pardus
ENSMALG00000005930	usb1	86	49.590	ENSPTIG00000007506	USB1	96	48.235	Panthera_tigris_altaica
ENSMALG00000005930	usb1	80	49.780	ENSPTRG00000008172	USB1	100	53.271	Pan_troglodytes
ENSMALG00000005930	usb1	80	53.304	ENSPANG00000025138	USB1	94	50.201	Papio_anubis
ENSMALG00000005930	usb1	82	61.017	ENSPKIG00000015109	usb1	79	61.017	Paramormyrops_kingsleyae
ENSMALG00000005930	usb1	79	46.930	ENSPSIG00000004305	USB1	100	46.930	Pelodiscus_sinensis
ENSMALG00000005930	usb1	79	65.766	ENSPMGG00000017725	usb1	85	65.766	Periophthalmus_magnuspinnatus
ENSMALG00000005930	usb1	99	47.687	ENSPEMG00000016183	Usb1	83	51.982	Peromyscus_maniculatus_bairdii
ENSMALG00000005930	usb1	82	50.213	ENSPMAG00000000462	usb1	99	50.213	Petromyzon_marinus
ENSMALG00000005930	usb1	100	69.611	ENSPFOG00000011130	usb1	90	73.092	Poecilia_formosa
ENSMALG00000005930	usb1	100	69.258	ENSPLAG00000009820	usb1	90	72.691	Poecilia_latipinna
ENSMALG00000005930	usb1	100	69.965	ENSPMEG00000006402	usb1	90	73.494	Poecilia_mexicana
ENSMALG00000005930	usb1	88	69.355	ENSPREG00000001047	usb1	87	74.766	Poecilia_reticulata
ENSMALG00000005930	usb1	75	49.533	ENSPPYG00000007401	USB1	94	46.218	Pongo_abelii
ENSMALG00000005930	usb1	80	53.744	ENSPCOG00000022612	USB1	95	50.199	Propithecus_coquereli
ENSMALG00000005930	usb1	99	48.754	ENSPVAG00000004613	USB1	95	50.607	Pteropus_vampyrus
ENSMALG00000005930	usb1	100	74.912	ENSPNYG00000022262	usb1	100	74.912	Pundamilia_nyererei
ENSMALG00000005930	usb1	79	63.393	ENSPNAG00000011736	usb1	76	63.393	Pygocentrus_nattereri
ENSMALG00000005930	usb1	99	47.331	ENSRNOG00000013216	Usb1	85	51.982	Rattus_norvegicus
ENSMALG00000005930	usb1	80	50.220	ENSRBIG00000044466	USB1	100	53.738	Rhinopithecus_bieti
ENSMALG00000005930	usb1	80	53.304	ENSRROG00000029211	USB1	95	49.801	Rhinopithecus_roxellana
ENSMALG00000005930	usb1	80	52.863	ENSSBOG00000029362	USB1	95	49.402	Saimiri_boliviensis_boliviensis
ENSMALG00000005930	usb1	77	52.055	ENSSHAG00000006993	USB1	90	52.863	Sarcophilus_harrisii
ENSMALG00000005930	usb1	88	60.079	ENSSFOG00015023663	usb1	80	60.079	Scleropages_formosus
ENSMALG00000005930	usb1	100	73.490	ENSSMAG00000015834	usb1	100	73.154	Scophthalmus_maximus
ENSMALG00000005930	usb1	79	83.929	ENSSDUG00000002949	usb1	99	73.498	Seriola_dumerili
ENSMALG00000005930	usb1	100	79.433	ENSSLDG00000014174	usb1	100	79.433	Seriola_lalandi_dorsalis
ENSMALG00000005930	usb1	76	54.673	ENSSPUG00000006741	USB1	100	54.673	Sphenodon_punctatus
ENSMALG00000005930	usb1	99	72.632	ENSSPAG00000007484	usb1	99	72.535	Stegastes_partitus
ENSMALG00000005930	usb1	99	46.619	ENSSSCG00000002807	USB1	93	48.996	Sus_scrofa
ENSMALG00000005930	usb1	74	56.398	ENSTGUG00000004792	USB1	93	51.793	Taeniopygia_guttata
ENSMALG00000005930	usb1	99	67.616	ENSTRUG00000021069	usb1	91	72.470	Takifugu_rubripes
ENSMALG00000005930	usb1	99	57.651	ENSTNIG00000000626	usb1	94	62.000	Tetraodon_nigroviridis
ENSMALG00000005930	usb1	79	35.714	ENSTBEG00000001507	USB1	97	35.714	Tupaia_belangeri
ENSMALG00000005930	usb1	99	49.110	ENSUAMG00000016823	USB1	94	49.802	Ursus_americanus
ENSMALG00000005930	usb1	76	53.738	ENSUMAG00000021369	USB1	100	53.738	Ursus_maritimus
ENSMALG00000005930	usb1	99	49.110	ENSVVUG00000023700	USB1	99	49.027	Vulpes_vulpes
ENSMALG00000005930	usb1	76	55.300	ENSXETG00000013795	usb1	89	55.157	Xenopus_tropicalis
ENSMALG00000005930	usb1	88	73.896	ENSXMAG00000024687	usb1	73	73.896	Xiphophorus_maculatus