EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000005990 (Gene tree)
Gene ID: 109973565
Gene Symbol: ercc2
Alias: XPD|zgc:56365
Full Name: ERCC excision repair 2%2C TFIIH core complex helicase subunit
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 10765 bases
Position: chrKV884982.1:217943-228707
Accession: 109973565
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000008501	ResIII	PF04851.15	4.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000008680	-	2046	-	ENSMALP00000008501	681 (aa)	-	-
ENSMALT00000008645	-	2881	XM_020623253	ENSMALP00000008467	760 (aa)	XP_020478909	UPI0009B46327

Gene Model

Click here to download ENSMALG00000005990's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb03022	Basal transcription factors	KEGG
malb03420	Nucleotide excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000005990's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000005990	ercc2	99	83.211	ENSG00000104884	ERCC2	99	83.211	Homo_sapiens
ENSMALG00000005990	ercc2	98	95.783	ENSAPOG00000000375	ercc2	100	95.783	Acanthochromis_polyacanthus
ENSMALG00000005990	ercc2	100	96.035	ENSACIG00000008002	ercc2	100	96.035	Amphilophus_citrinellus
ENSMALG00000005990	ercc2	98	94.003	ENSAOCG00000016153	ercc2	100	94.003	Amphiprion_ocellaris
ENSMALG00000005990	ercc2	98	93.853	ENSAPEG00000016712	ercc2	100	93.853	Amphiprion_percula
ENSMALG00000005990	ercc2	99	96.912	ENSATEG00000005268	ercc2	99	96.912	Anabas_testudineus
ENSMALG00000005990	ercc2	99	83.063	ENSANAG00000022694	ERCC2	99	83.063	Aotus_nancymaae
ENSMALG00000005990	ercc2	98	96.687	ENSACLG00000017573	ercc2	100	96.687	Astatotilapia_calliptera
ENSMALG00000005990	ercc2	98	93.072	ENSAMXG00000009052	ercc2	99	93.072	Astyanax_mexicanus
ENSMALG00000005990	ercc2	99	83.358	ENSCJAG00000012716	ERCC2	99	83.358	Callithrix_jacchus
ENSMALG00000005990	ercc2	99	83.824	ENSCAFG00020011390	ERCC2	99	83.824	Canis_lupus_dingo
ENSMALG00000005990	ercc2	97	68.285	ENSTSYG00000026723	ERCC2	98	68.285	Carlito_syrichta
ENSMALG00000005990	ercc2	99	80.994	ENSCCAG00000019831	ERCC2	99	80.994	Cebus_capucinus
ENSMALG00000005990	ercc2	91	40.678	ENSCSAG00000005928	BRIP1	50	40.678	Chlorocebus_sabaeus
ENSMALG00000005990	ercc2	91	40.678	ENSCANG00000032026	BRIP1	50	40.678	Colobus_angolensis_palliatus
ENSMALG00000005990	ercc2	99	83.358	ENSCANG00000040683	ERCC2	99	83.358	Colobus_angolensis_palliatus
ENSMALG00000005990	ercc2	98	90.677	ENSCSEG00000006041	ercc2	100	90.677	Cynoglossus_semilaevis
ENSMALG00000005990	ercc2	99	81.176	ENSEASG00005013856	ERCC2	99	81.176	Equus_asinus_asinus
ENSMALG00000005990	ercc2	98	92.018	ENSELUG00000018055	ercc2	99	92.018	Esox_lucius
ENSMALG00000005990	ercc2	99	83.800	ENSFCAG00000002679	ERCC2	99	83.800	Felis_catus
ENSMALG00000005990	ercc2	99	96.029	ENSFHEG00000000072	ercc2	99	96.029	Fundulus_heteroclitus
ENSMALG00000005990	ercc2	99	84.123	ENSGAGG00000009493	ERCC2	99	84.123	Gopherus_agassizii
ENSMALG00000005990	ercc2	99	83.358	ENSGGOG00000015842	ERCC2	99	83.358	Gorilla_gorilla
ENSMALG00000005990	ercc2	98	95.808	ENSHBUG00000002187	ercc2	100	95.808	Haplochromis_burtoni
ENSMALG00000005990	ercc2	99	94.559	ENSLBEG00000010573	ercc2	92	94.559	Labrus_bergylta
ENSMALG00000005990	ercc2	99	83.358	ENSMFAG00000037898	ERCC2	99	83.358	Macaca_fascicularis
ENSMALG00000005990	ercc2	99	83.358	ENSMMUG00000014419	ERCC2	99	83.358	Macaca_mulatta
ENSMALG00000005990	ercc2	83	40.678	ENSMNEG00000040728	BRIP1	57	40.678	Macaca_nemestrina
ENSMALG00000005990	ercc2	99	83.358	ENSMNEG00000042641	ERCC2	99	83.358	Macaca_nemestrina
ENSMALG00000005990	ercc2	99	83.333	ENSMLEG00000043492	ERCC2	99	83.333	Mandrillus_leucophaeus
ENSMALG00000005990	ercc2	100	96.916	ENSMAMG00000016724	ercc2	100	96.916	Mastacembelus_armatus
ENSMALG00000005990	ercc2	98	96.692	ENSMZEG00005024441	ercc2	100	96.692	Maylandia_zebra
ENSMALG00000005990	ercc2	99	83.063	ENSMICG00000000635	ERCC2	99	83.063	Microcebus_murinus
ENSMALG00000005990	ercc2	100	90.602	ENSMMOG00000005162	ercc2	100	90.602	Mola_mola
ENSMALG00000005990	ercc2	99	84.242	MGP_CAROLIEiJ_G0029287	Ercc2	99	84.242	Mus_caroli
ENSMALG00000005990	ercc2	99	84.242	ENSMUSG00000030400	Ercc2	99	84.242	Mus_musculus
ENSMALG00000005990	ercc2	99	84.242	MGP_PahariEiJ_G0021147	Ercc2	99	84.242	Mus_pahari
ENSMALG00000005990	ercc2	99	84.094	MGP_SPRETEiJ_G0030371	Ercc2	99	84.094	Mus_spretus
ENSMALG00000005990	ercc2	99	83.358	ENSPPAG00000044005	ERCC2	99	83.358	Pan_paniscus
ENSMALG00000005990	ercc2	99	79.412	ENSPPRG00000000507	ERCC2	99	79.559	Panthera_pardus
ENSMALG00000005990	ercc2	99	83.358	ENSPTRG00000011149	ERCC2	99	83.358	Pan_troglodytes
ENSMALG00000005990	ercc2	99	83.333	ENSPANG00000032195	ERCC2	99	83.333	Papio_anubis
ENSMALG00000005990	ercc2	99	89.838	ENSPKIG00000006883	ercc2	98	89.838	Paramormyrops_kingsleyae
ENSMALG00000005990	ercc2	98	93.825	ENSPMGG00000000223	ercc2	99	93.825	Periophthalmus_magnuspinnatus
ENSMALG00000005990	ercc2	99	95.588	ENSPLAG00000002626	ercc2	99	95.588	Poecilia_latipinna
ENSMALG00000005990	ercc2	99	95.588	ENSPMEG00000002858	ercc2	99	95.588	Poecilia_mexicana
ENSMALG00000005990	ercc2	99	91.029	ENSPREG00000019280	ercc2	99	91.029	Poecilia_reticulata
ENSMALG00000005990	ercc2	98	95.952	ENSPNYG00000022007	ercc2	100	95.952	Pundamilia_nyererei
ENSMALG00000005990	ercc2	98	92.620	ENSPNAG00000010434	ercc2	99	92.620	Pygocentrus_nattereri
ENSMALG00000005990	ercc2	99	83.358	ENSRROG00000040423	ERCC2	99	83.358	Rhinopithecus_roxellana
ENSMALG00000005990	ercc2	99	83.235	ENSSBOG00000030257	ERCC2	99	83.235	Saimiri_boliviensis_boliviensis
ENSMALG00000005990	ercc2	98	90.000	ENSSMAG00000019720	ercc2	100	90.000	Scophthalmus_maximus
ENSMALG00000005990	ercc2	98	96.090	ENSSDUG00000002397	ercc2	100	96.090	Seriola_dumerili
ENSMALG00000005990	ercc2	98	95.940	ENSSLDG00000020353	ercc2	100	95.940	Seriola_lalandi_dorsalis
ENSMALG00000005990	ercc2	100	95.595	ENSSPAG00000002074	ercc2	100	95.595	Stegastes_partitus
ENSMALG00000005990	ercc2	100	93.979	ENSTRUG00000007303	ercc2	100	93.979	Takifugu_rubripes
ENSMALG00000005990	ercc2	99	83.824	ENSUAMG00000019562	ERCC2	99	83.824	Ursus_americanus
ENSMALG00000005990	ercc2	99	91.324	ENSXMAG00000003922	ercc2	99	91.324	Xiphophorus_maculatus