EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMALG00000006052 (Gene tree)
Gene ID
109964250
Gene Symbol
rab5c
Alias
wu:fb98b08|wu:fi16g01
Full Name
RAB5C%2C member RAS oncogene family
Gene Type
protein_coding
Species
Monopterus_albus
Status
putative
Strand
Plus strand
Length
10123 bases
Position
chrKV884773.1:860749-870871
Accession
109964250
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMALP00000008973MMR_HSR1PF01926.230.000111
ENSMALP00000009047MMR_HSR1PF01926.230.0001111
ENSMALP00000009040MMR_HSR1PF01926.230.0001311
ENSMALP00000009076MMR_HSR1PF01926.230.0001411
ENSMALP00000009097MMR_HSR1PF01926.230.0001511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMALT00000009265-660-ENSMALP00000009076219 (aa)--
ENSMALT00000009236-621-ENSMALP00000009047206 (aa)--
ENSMALT00000009287-672XM_020607425ENSMALP00000009097223 (aa)XP_020463081-
ENSMALT00000009161-600-ENSMALP00000008973199 (aa)--
ENSMALT00000009229-651-ENSMALP00000009040216 (aa)--
Gene Model
Click here to download ENSMALG00000006052's gene model file
Pathways
Pathway IDPathway NameSource
malb04144EndocytosisKEGG
malb04145PhagosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000006052's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMALG00000006052rab5c7434.940ENSMALG00000012723RAB39B7834.940
ENSMALG00000006052rab5c5333.019ENSMALG00000010254RAP2B9534.400
ENSMALG00000006052rab5c9642.233ENSMALG00000012003rab1ab9645.408
ENSMALG00000006052rab5c9146.429ENSMALG00000011693rab22a9847.959
ENSMALG00000006052rab5c8234.225ENSMALG00000012630rab33a8334.225
ENSMALG00000006052rab5c9141.026ENSMALG00000021144rab1ba9643.367
ENSMALG00000006052rab5c9030.097ENSMALG00000013806rab367931.401
ENSMALG00000006052rab5c9431.818ENSMALG00000015762rab127433.520
ENSMALG00000006052rab5c7336.585ENSMALG00000018973RAB39B7736.585
ENSMALG00000006052rab5c9332.579ENSMALG00000022693rab33ba9132.579
ENSMALG00000006052rab5c9982.063ENSMALG00000022348-9981.735
ENSMALG00000006052rab5c7741.714ENSMALG00000016312RAB7A8541.714
ENSMALG00000006052rab5c7543.452ENSMALG00000010438rab308243.452
ENSMALG00000006052rab5c8131.522ENSMALG00000013514rab38b8431.522
ENSMALG00000006052rab5c7741.714ENSMALG00000004053RAB7A8541.714
ENSMALG00000006052rab5c9142.564ENSMALG00000006985-9644.103
ENSMALG00000006052rab5c9338.806ENSMALG00000015854rab6ba9741.176
ENSMALG00000006052rab5c5940.171ENSMALG00000005944rabl27035.366
ENSMALG00000006052rab5c8838.725ENSMALG00000022187rab11bb9438.725
ENSMALG00000006052rab5c9680.000ENSMALG00000014929rab5aa9780.569
ENSMALG00000006052rab5c8838.021ENSMALG00000004342rab2a9638.049
ENSMALG00000006052rab5c8840.212ENSMALG00000003956-8741.270
ENSMALG00000006052rab5c7842.604ENSMALG00000021129zgc:1719278044.379
ENSMALG00000006052rab5c9437.824ENSMALG00000007905RAB178538.462
ENSMALG00000006052rab5c8140.571ENSMALG00000017417rab6bb8442.286
ENSMALG00000006052rab5c7942.529ENSMALG00000010549rab418242.529
ENSMALG00000006052rab5c7236.943ENSMALG00000016038RAB157437.821
ENSMALG00000006052rab5c8238.418ENSMALG00000020807-8939.548
ENSMALG00000006052rab5c5333.019ENSMALG00000015576-8734.400
ENSMALG00000006052rab5c5931.967ENSMALG00000008164arl8bb6332.258
ENSMALG00000006052rab5c6734.459ENSMALG00000002136rab237435.526
ENSMALG00000006052rab5c8232.979ENSMALG00000015936RAB9A8332.979
ENSMALG00000006052rab5c7345.963ENSMALG00000003050rab11a7545.963
ENSMALG00000006052rab5c7145.860ENSMALG00000015154rab25a7746.835
ENSMALG00000006052rab5c7541.667ENSMALG00000014727si:dkey-16l2.169537.624
ENSMALG00000006052rab5c7537.209ENSMALG00000003712zgc:1015597337.209
ENSMALG00000006052rab5c9138.462ENSMALG00000004112rab25b9440.000
ENSMALG00000006052rab5c8937.500ENSMALG00000022118rab149137.500
ENSMALG00000006052rab5c7442.683ENSMALG00000009813rab18a8042.683
ENSMALG00000006052rab5c7632.544ENSMALG00000012506rab9a8132.544
ENSMALG00000006052rab5c7146.497ENSMALG00000004093rab11al7346.497
ENSMALG00000006052rab5c8230.688ENSMALG00000018436RAB297730.688
ENSMALG00000006052rab5c7430.120ENSMALG00000017903rheb8230.723
ENSMALG00000006052rab5c7543.713ENSMALG00000020364-8043.713
ENSMALG00000006052rab5c8831.455ENSMALG00000021944-8938.384
ENSMALG00000006052rab5c7344.099ENSMALG00000021949rab11ba7444.099
ENSMALG00000006052rab5c7333.133ENSMALG00000013152si:dkey-34d22.57533.133
ENSMALG00000006052rab5c9631.925ENSMALG00000007664rab9b9532.547
ENSMALG00000006052rab5c5931.148ENSMALG00000001217arl8ba6231.148
ENSMALG00000006052rab5c5931.148ENSMALG00000019198arl8a6131.148
ENSMALG00000006052rab5c9341.294ENSMALG00000005069rab18b9542.574
ENSMALG00000006052rab5c7530.952ENSMALG00000010781kras9030.409
ENSMALG00000006052rab5c7339.130ENSMALG00000021928rab157639.130
ENSMALG00000006052rab5c5843.478ENSMALG00000003479rab35b7243.478
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMALG00000006052rab5c9884.091ENSG00000108774RAB5C10091.129Homo_sapiens
ENSMALG00000006052rab5c9789.498ENSAPOG00000016864rab5c9889.302Acanthochromis_polyacanthus
ENSMALG00000006052rab5c9684.259ENSAMEG00000006003RAB5C9784.434Ailuropoda_melanoleuca
ENSMALG00000006052rab5c9789.954ENSACIG00000010896rab5c9989.671Amphilophus_citrinellus
ENSMALG00000006052rab5c9789.498ENSAOCG00000016614rab5c9889.302Amphiprion_ocellaris
ENSMALG00000006052rab5c9888.940ENSAPEG00000017868-9988.940Amphiprion_percula
ENSMALG00000006052rab5c9691.667ENSATEG00000001937rab5c9791.509Anabas_testudineus
ENSMALG00000006052rab5c9185.294ENSANAG00000025390RAB5C9885.500Aotus_nancymaae
ENSMALG00000006052rab5c9789.041ENSACLG00000002706rab5c9888.837Astatotilapia_calliptera
ENSMALG00000006052rab5c9683.019ENSACLG00000008615-9782.326Astatotilapia_calliptera
ENSMALG00000006052rab5c9790.455ENSAMXG00000043717rab5c9890.278Astyanax_mexicanus
ENSMALG00000006052rab5c9486.058ENSAMXG00000037267-9986.058Astyanax_mexicanus
ENSMALG00000006052rab5c9684.186ENSBTAG00000006982RAB5C9784.360Bos_taurus
ENSMALG00000006052rab5c9870.507WBGene00004268rab-59971.226Caenorhabditis_elegans
ENSMALG00000006052rab5c9684.259ENSCAFG00000015629RAB5C9784.434Canis_familiaris
ENSMALG00000006052rab5c9684.259ENSCAFG00020013537RAB5C9784.434Canis_lupus_dingo
ENSMALG00000006052rab5c9684.186ENSCHIG00000012960RAB5C9784.360Capra_hircus
ENSMALG00000006052rab5c9684.186ENSTSYG00000030531RAB5C9784.360Carlito_syrichta
ENSMALG00000006052rab5c9683.721ENSCCAG00000025940RAB5C9783.886Cebus_capucinus
ENSMALG00000006052rab5c9684.651ENSCATG00000040873RAB5C9784.834Cercocebus_atys
ENSMALG00000006052rab5c9684.186ENSCLAG00000016650RAB5C9784.360Chinchilla_lanigera
ENSMALG00000006052rab5c7889.831ENSCHOG00000009886RAB5C9690.058Choloepus_hoffmanni
ENSMALG00000006052rab5c10074.222ENSCING00000003340-9973.853Ciona_intestinalis
ENSMALG00000006052rab5c9773.423ENSCSAVG00000000613-9883.125Ciona_savignyi
ENSMALG00000006052rab5c9684.651ENSCGRG00001014226Rab5c9784.834Cricetulus_griseus_chok1gshd
ENSMALG00000006052rab5c9684.651ENSCGRG00000007534Rab5c9784.834Cricetulus_griseus_crigri
ENSMALG00000006052rab5c9788.584ENSCSEG00000017024rab5c9888.372Cynoglossus_semilaevis
ENSMALG00000006052rab5c9789.041ENSCVAG00000009550rab5c9888.837Cyprinodon_variegatus
ENSMALG00000006052rab5c9683.721ENSDNOG00000038853RAB5C9783.886Dasypus_novemcinctus
ENSMALG00000006052rab5c9684.651ENSDORG00000006819Rab5c9784.834Dipodomys_ordii
ENSMALG00000006052rab5c8378.610FBgn0014010Rab58180.337Drosophila_melanogaster
ENSMALG00000006052rab5c8481.183ENSEBUG00000014794rab5c8881.183Eptatretus_burgeri
ENSMALG00000006052rab5c9683.721ENSEASG00005009281RAB5C9783.886Equus_asinus_asinus
ENSMALG00000006052rab5c9684.186ENSECAG00000025054RAB5C9784.360Equus_caballus
ENSMALG00000006052rab5c9684.186ENSEEUG00000002790RAB5C9784.360Erinaceus_europaeus
ENSMALG00000006052rab5c9688.372ENSELUG00000018516rab5c9788.152Esox_lucius
ENSMALG00000006052rab5c9784.651ENSELUG00000010439-9884.651Esox_lucius
ENSMALG00000006052rab5c9684.186ENSFCAG00000002148RAB5C9784.360Felis_catus
ENSMALG00000006052rab5c9683.721ENSFDAG00000021541RAB5C9783.886Fukomys_damarensis
ENSMALG00000006052rab5c9982.511ENSFHEG00000015268-9784.038Fundulus_heteroclitus
ENSMALG00000006052rab5c9789.954ENSFHEG00000012117rab5c9889.767Fundulus_heteroclitus
ENSMALG00000006052rab5c9789.041ENSGMOG00000015096rab5c9888.837Gadus_morhua
ENSMALG00000006052rab5c7784.483ENSGMOG00000001876-9785.207Gadus_morhua
ENSMALG00000006052rab5c9789.954ENSGAFG00000000884rab5c9889.767Gambusia_affinis
ENSMALG00000006052rab5c9582.775ENSGAFG00000003642-9981.081Gambusia_affinis
ENSMALG00000006052rab5c9786.758ENSGACG00000008659rab5c9886.512Gasterosteus_aculeatus
ENSMALG00000006052rab5c9684.651ENSGGOG00000005472RAB5C9784.834Gorilla_gorilla
ENSMALG00000006052rab5c9789.041ENSHBUG00000002014rab5c9888.837Haplochromis_burtoni
ENSMALG00000006052rab5c9683.019ENSHBUG00000006823-9782.326Haplochromis_burtoni
ENSMALG00000006052rab5c9683.256ENSHGLG00000012067RAB5C9783.412Heterocephalus_glaber_female
ENSMALG00000006052rab5c9578.095ENSHCOG00000020238-9776.471Hippocampus_comes
ENSMALG00000006052rab5c9689.908ENSHCOG00000004662rab5c9689.720Hippocampus_comes
ENSMALG00000006052rab5c9587.560ENSIPUG00000020082rab5c9888.018Ictalurus_punctatus
ENSMALG00000006052rab5c9684.651ENSSTOG00000006620RAB5C9784.834Ictidomys_tridecemlineatus
ENSMALG00000006052rab5c9684.186ENSJJAG00000021181Rab5c9784.360Jaculus_jaculus
ENSMALG00000006052rab5c9982.511ENSKMAG00000017417-9783.568Kryptolebias_marmoratus
ENSMALG00000006052rab5c9790.411ENSKMAG00000020038rab5c9890.233Kryptolebias_marmoratus
ENSMALG00000006052rab5c9790.868ENSLBEG00000004128rab5c9890.698Labrus_bergylta
ENSMALG00000006052rab5c10083.111ENSLBEG00000010408-9784.651Labrus_bergylta
ENSMALG00000006052rab5c9686.512ENSLOCG00000012566rab5c9886.256Lepisosteus_oculatus
ENSMALG00000006052rab5c9784.579ENSMFAG00000039627RAB5C9984.579Macaca_fascicularis
ENSMALG00000006052rab5c9684.651ENSMNEG00000000355RAB5C9784.834Macaca_nemestrina
ENSMALG00000006052rab5c9984.375ENSMAMG00000016207-9983.636Mastacembelus_armatus
ENSMALG00000006052rab5c9792.661ENSMAMG00000022322rab5c9792.488Mastacembelus_armatus
ENSMALG00000006052rab5c9683.019ENSMZEG00005021090-9782.326Maylandia_zebra
ENSMALG00000006052rab5c9789.041ENSMZEG00005022735rab5c9888.837Maylandia_zebra
ENSMALG00000006052rab5c9684.186ENSMAUG00000015005Rab5c9784.360Mesocricetus_auratus
ENSMALG00000006052rab5c9684.186ENSMICG00000041608RAB5C9784.360Microcebus_murinus
ENSMALG00000006052rab5c9684.186ENSMOCG00000018531-9784.360Microtus_ochrogaster
ENSMALG00000006052rab5c9789.302ENSMMOG00000020621rab5c9889.302Mola_mola
ENSMALG00000006052rab5c9684.186MGP_CAROLIEiJ_G0017184Rab5c9784.360Mus_caroli
ENSMALG00000006052rab5c9684.186ENSMUSG00000019173Rab5c9784.360Mus_musculus
ENSMALG00000006052rab5c9684.186MGP_PahariEiJ_G0018314Rab5c9784.360Mus_pahari
ENSMALG00000006052rab5c9684.186MGP_SPRETEiJ_G0018027Rab5c9784.360Mus_spretus
ENSMALG00000006052rab5c9684.259ENSMPUG00000010554RAB5C9784.434Mustela_putorius_furo
ENSMALG00000006052rab5c9683.721ENSNGAG00000010286Rab5c9783.886Nannospalax_galili
ENSMALG00000006052rab5c9789.954ENSNBRG00000018165rab5c9889.767Neolamprologus_brichardi
ENSMALG00000006052rab5c9683.019ENSNBRG00000016922-9782.326Neolamprologus_brichardi
ENSMALG00000006052rab5c7886.705ENSOPRG00000008255RAB5C9786.705Ochotona_princeps
ENSMALG00000006052rab5c9683.721ENSODEG00000017920RAB5C9783.886Octodon_degus
ENSMALG00000006052rab5c9789.954ENSONIG00000001113rab5c9889.767Oreochromis_niloticus
ENSMALG00000006052rab5c9690.741ENSORLG00000003882rab5c9790.566Oryzias_latipes
ENSMALG00000006052rab5c9690.278ENSORLG00020008388rab5c9790.094Oryzias_latipes_hni
ENSMALG00000006052rab5c9690.741ENSORLG00015021900rab5c9790.566Oryzias_latipes_hsok
ENSMALG00000006052rab5c9690.741ENSOMEG00000023078rab5c9790.566Oryzias_melastigma
ENSMALG00000006052rab5c9684.186ENSOGAG00000009456RAB5C9784.360Otolemur_garnettii
ENSMALG00000006052rab5c9684.186ENSOARG00000018768RAB5C9784.360Ovis_aries
ENSMALG00000006052rab5c9684.651ENSPPAG00000037206RAB5C9784.834Pan_paniscus
ENSMALG00000006052rab5c9684.186ENSPPRG00000005745RAB5C9784.360Panthera_pardus
ENSMALG00000006052rab5c9684.186ENSPTIG00000008177RAB5C9784.360Panthera_tigris_altaica
ENSMALG00000006052rab5c9784.579ENSPTRG00000009194RAB5C9984.579Pan_troglodytes
ENSMALG00000006052rab5c9682.791ENSPKIG00000001237-9782.938Paramormyrops_kingsleyae
ENSMALG00000006052rab5c9783.178ENSPKIG00000020112-9983.178Paramormyrops_kingsleyae
ENSMALG00000006052rab5c9986.818ENSPMGG00000010792rab5c10087.097Periophthalmus_magnuspinnatus
ENSMALG00000006052rab5c9684.186ENSPEMG00000017971Rab5c9784.360Peromyscus_maniculatus_bairdii
ENSMALG00000006052rab5c9673.148ENSPMAG00000007867rab5c9673.810Petromyzon_marinus
ENSMALG00000006052rab5c9674.771ENSPMAG00000001399rab5c9775.472Petromyzon_marinus
ENSMALG00000006052rab5c9675.000ENSPMAG00000000008rab5c9675.234Petromyzon_marinus
ENSMALG00000006052rab5c9684.651ENSPCIG00000020225-9685.167Phascolarctos_cinereus
ENSMALG00000006052rab5c9982.063ENSPLAG00000016333-10081.614Poecilia_latipinna
ENSMALG00000006052rab5c9789.954ENSPLAG00000004790rab5c9889.767Poecilia_latipinna
ENSMALG00000006052rab5c9789.954ENSPMEG00000011336rab5c9889.767Poecilia_mexicana
ENSMALG00000006052rab5c9682.949ENSPMEG00000012614-10081.614Poecilia_mexicana
ENSMALG00000006052rab5c9789.954ENSPREG00000010146rab5c9889.767Poecilia_reticulata
ENSMALG00000006052rab5c8684.456ENSPREG00000022167-8689.286Poecilia_reticulata
ENSMALG00000006052rab5c9684.651ENSPPYG00000008398RAB5C9784.834Pongo_abelii
ENSMALG00000006052rab5c9683.256ENSPCAG00000016412RAB5C9783.412Procavia_capensis
ENSMALG00000006052rab5c9683.256ENSPCOG00000026327RAB5C9783.412Propithecus_coquereli
ENSMALG00000006052rab5c9684.186ENSPVAG00000003867RAB5C9784.360Pteropus_vampyrus
ENSMALG00000006052rab5c9683.019ENSPNYG00000015851-9782.326Pundamilia_nyererei
ENSMALG00000006052rab5c9789.041ENSPNYG00000010615rab5c9888.837Pundamilia_nyererei
ENSMALG00000006052rab5c9790.455ENSPNAG00000028138rab5c9890.278Pygocentrus_nattereri
ENSMALG00000006052rab5c9584.689ENSPNAG00000002218-9884.689Pygocentrus_nattereri
ENSMALG00000006052rab5c9684.186ENSRNOG00000018568Rab5c9784.360Rattus_norvegicus
ENSMALG00000006052rab5c9684.651ENSRBIG00000031376RAB5C9784.834Rhinopithecus_bieti
ENSMALG00000006052rab5c9684.651ENSRROG00000032895RAB5C9784.834Rhinopithecus_roxellana
ENSMALG00000006052rab5c9683.721ENSSBOG00000032552-9783.886Saimiri_boliviensis_boliviensis
ENSMALG00000006052rab5c9684.651ENSSHAG00000005267-9784.834Sarcophilus_harrisii
ENSMALG00000006052rab5c9781.395ENSSFOG00015009988-9881.395Scleropages_formosus
ENSMALG00000006052rab5c9588.038ENSSMAG00000007323rab5c10087.727Scophthalmus_maximus
ENSMALG00000006052rab5c9789.954ENSSDUG00000023008rab5c9889.767Seriola_dumerili
ENSMALG00000006052rab5c9789.498ENSSLDG00000017771rab5c9889.302Seriola_lalandi_dorsalis
ENSMALG00000006052rab5c9683.721ENSSPUG00000012950-9783.886Sphenodon_punctatus
ENSMALG00000006052rab5c9791.324ENSSPAG00000006436rab5c9891.163Stegastes_partitus
ENSMALG00000006052rab5c9684.186ENSSSCG00000032467RAB5C9784.360Sus_scrofa
ENSMALG00000006052rab5c9789.302ENSTRUG00000015590rab5c9889.302Takifugu_rubripes
ENSMALG00000006052rab5c9989.189ENSTNIG00000011711rab5c9591.469Tetraodon_nigroviridis
ENSMALG00000006052rab5c9684.186ENSTBEG00000007092RAB5C9784.360Tupaia_belangeri
ENSMALG00000006052rab5c9684.186ENSTTRG00000006673RAB5C9784.360Tursiops_truncatus
ENSMALG00000006052rab5c9684.259ENSUAMG00000024343RAB5C9784.434Ursus_americanus
ENSMALG00000006052rab5c9684.259ENSUMAG00000023270RAB5C9784.434Ursus_maritimus
ENSMALG00000006052rab5c9583.099ENSXCOG00000006300-9981.081Xiphophorus_couchianus
ENSMALG00000006052rab5c9988.991ENSXCOG00000016788rab5c9990.141Xiphophorus_couchianus
ENSMALG00000006052rab5c9981.614ENSXMAG00000022179-9783.099Xiphophorus_maculatus
ENSMALG00000006052rab5c9789.954ENSXMAG00000003266rab5c9889.767Xiphophorus_maculatus

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