EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMALG00000006066 (Gene tree)
Gene ID
109958607
Gene Symbol
pabpc1b
Alias
-
Full Name
polyadenylate-binding protein 1-like
Gene Type
protein_coding
Species
Monopterus_albus
Status
putative
Strand
Plus strand
Length
5389 bases
Position
chrKV884722.1:952627-958015
Accession
109958607
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMALP00000008542PABPPF00658.183.9e-3211
ENSMALP00000008542RRM_5PF13893.64.1e-1012
ENSMALP00000008542RRM_5PF13893.64.1e-1022
ENSMALP00000008542RRM_1PF00076.228.6e-9014
ENSMALP00000008542RRM_1PF00076.228.6e-9024
ENSMALP00000008542RRM_1PF00076.228.6e-9034
ENSMALP00000008542RRM_1PF00076.228.6e-9044
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMALT00000008721-1755XM_020597369ENSMALP00000008542584 (aa)XP_020453025-
Gene Model
Click here to download ENSMALG00000006066's gene model file
Pathways
Pathway IDPathway NameSource
malb03013RNA transportKEGG
malb03015mRNA surveillance pathwayKEGG
malb03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000006066's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMALG00000006066pabpc1b5736.905ENSMALG00000011132-5335.227
ENSMALG00000006066pabpc1b6437.349ENSMALG00000003411elavl28237.349
ENSMALG00000006066pabpc1b10087.352ENSMALG00000013020-10087.395
ENSMALG00000006066pabpc1b7338.554ENSMALG00000012778-7938.554
ENSMALG00000006066pabpc1b7237.349ENSMALG00000001696celf47737.349
ENSMALG00000006066pabpc1b6132.500ENSMALG00000019079-9733.333
ENSMALG00000006066pabpc1b9566.612ENSMALG00000021622pabpc1l10066.612
ENSMALG00000006066pabpc1b6130.380ENSMALG00000016778trnau1apa6630.380
ENSMALG00000006066pabpc1b6431.183ENSMALG00000016924-7531.183
ENSMALG00000006066pabpc1b6230.328ENSMALG00000017478tia1l9330.328
ENSMALG00000006066pabpc1b6636.145ENSMALG00000016432elavl48436.145
ENSMALG00000006066pabpc1b6437.349ENSMALG00000016659elavl39037.349
ENSMALG00000006066pabpc1b5136.986ENSMALG00000011641celf3a7036.986
ENSMALG00000006066pabpc1b6231.148ENSMALG00000021265-8530.055
ENSMALG00000006066pabpc1b5139.759ENSMALG00000017703celf5a5739.759
ENSMALG00000006066pabpc1b9874.157ENSMALG00000011017pabpc49875.000
ENSMALG00000006066pabpc1b5634.091ENSMALG00000000961-5735.714
ENSMALG00000006066pabpc1b5236.986ENSMALG00000007438celf3b5836.986
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMALG00000006066pabpc1b6379.082ENSG00000184388PABPC1L2B9879.082Homo_sapiens
ENSMALG00000006066pabpc1b6379.082ENSG00000186288PABPC1L2A9879.082Homo_sapiens
ENSMALG00000006066pabpc1b10090.536ENSAPOG00000017776pabpc1b10090.379Acanthochromis_polyacanthus
ENSMALG00000006066pabpc1b10085.243ENSAPOG00000015105pabpc1a10085.086Acanthochromis_polyacanthus
ENSMALG00000006066pabpc1b6479.082ENSAMEG00000019441-9879.082Ailuropoda_melanoleuca
ENSMALG00000006066pabpc1b10087.159ENSACIG00000018366pabpc1b10087.319Amphilophus_citrinellus
ENSMALG00000006066pabpc1b10085.400ENSACIG00000004685pabpc1a10083.516Amphilophus_citrinellus
ENSMALG00000006066pabpc1b10090.221ENSAOCG00000019839pabpc1b10090.063Amphiprion_ocellaris
ENSMALG00000006066pabpc1b10085.243ENSAOCG00000011656pabpc1a10083.359Amphiprion_ocellaris
ENSMALG00000006066pabpc1b10085.243ENSAPEG00000006963pabpc1a10083.359Amphiprion_percula
ENSMALG00000006066pabpc1b10090.221ENSAPEG00000010435pabpc1b10090.063Amphiprion_percula
ENSMALG00000006066pabpc1b10085.086ENSATEG00000024852pabpc1a10083.359Anabas_testudineus
ENSMALG00000006066pabpc1b10090.094ENSATEG00000012917pabpc1b10088.365Anabas_testudineus
ENSMALG00000006066pabpc1b6379.082ENSANAG00000019431-9879.082Aotus_nancymaae
ENSMALG00000006066pabpc1b6379.082ENSANAG00000019429-9879.082Aotus_nancymaae
ENSMALG00000006066pabpc1b9987.478ENSACLG00000009399pabpc1a10087.478Astatotilapia_calliptera
ENSMALG00000006066pabpc1b10089.117ENSACLG00000014335pabpc1b10087.224Astatotilapia_calliptera
ENSMALG00000006066pabpc1b10088.504ENSAMXG00000008599pabpc1b10088.346Astyanax_mexicanus
ENSMALG00000006066pabpc1b6476.077ENSBTAG00000052491-9876.077Bos_taurus
ENSMALG00000006066pabpc1b6478.049ENSBTAG00000050902-9878.049Bos_taurus
ENSMALG00000006066pabpc1b6379.082ENSCJAG00000041326-9879.082Callithrix_jacchus
ENSMALG00000006066pabpc1b6478.049ENSCAFG00020002052-9878.049Canis_lupus_dingo
ENSMALG00000006066pabpc1b6379.082ENSCHIG00000006283-9879.082Capra_hircus
ENSMALG00000006066pabpc1b6379.082ENSCHIG00000011138-9879.082Capra_hircus
ENSMALG00000006066pabpc1b6379.082ENSTSYG00000001775-9879.082Carlito_syrichta
ENSMALG00000006066pabpc1b6479.082ENSCPOG00000009525-9879.082Cavia_porcellus
ENSMALG00000006066pabpc1b6379.082ENSCCAG00000031524-9879.082Cebus_capucinus
ENSMALG00000006066pabpc1b6379.082ENSCATG00000042826-9879.082Cercocebus_atys
ENSMALG00000006066pabpc1b6379.082ENSCATG00000043125-9879.082Cercocebus_atys
ENSMALG00000006066pabpc1b6378.061ENSCLAG00000017409-9878.061Chinchilla_lanigera
ENSMALG00000006066pabpc1b6378.061ENSCLAG00000017412-9878.061Chinchilla_lanigera
ENSMALG00000006066pabpc1b6479.082ENSCSAG00000000102-9879.082Chlorocebus_sabaeus
ENSMALG00000006066pabpc1b6379.558ENSCGRG00001023387-9677.835Cricetulus_griseus_chok1gshd
ENSMALG00000006066pabpc1b10086.278ENSCSEG00000015241-10086.120Cynoglossus_semilaevis
ENSMALG00000006066pabpc1b9985.533ENSCSEG00000013324pabpc1a9983.625Cynoglossus_semilaevis
ENSMALG00000006066pabpc1b10087.402ENSCVAG00000005489pabpc1b10085.827Cyprinodon_variegatus
ENSMALG00000006066pabpc1b10085.086ENSCVAG00000021872pabpc1a10083.516Cyprinodon_variegatus
ENSMALG00000006066pabpc1b10089.134ENSDARG00000021140pabpc1b9994.326Danio_rerio
ENSMALG00000006066pabpc1b10085.377ENSDARG00000017219pabpc1a10083.805Danio_rerio
ENSMALG00000006066pabpc1b6479.894ENSDNOG00000030926-9877.551Dasypus_novemcinctus
ENSMALG00000006066pabpc1b6377.551ENSDORG00000011362-9877.551Dipodomys_ordii
ENSMALG00000006066pabpc1b6477.670ENSEASG00005010399-9877.670Equus_asinus_asinus
ENSMALG00000006066pabpc1b6477.670ENSECAG00000002620-9877.670Equus_caballus
ENSMALG00000006066pabpc1b6474.490ENSEEUG00000008203-9874.490Erinaceus_europaeus
ENSMALG00000006066pabpc1b10087.284ENSELUG00000015062-10087.284Esox_lucius
ENSMALG00000006066pabpc1b9986.120ENSELUG00000003614pabpc1a10084.700Esox_lucius
ENSMALG00000006066pabpc1b6459.052ENSELUG00000005389-9759.052Esox_lucius
ENSMALG00000006066pabpc1b6379.082ENSFCAG00000039701-9879.082Felis_catus
ENSMALG00000006066pabpc1b6479.082ENSFDAG00000005484-9879.082Fukomys_damarensis
ENSMALG00000006066pabpc1b10085.714ENSFHEG00000018979pabpc1a10083.987Fundulus_heteroclitus
ENSMALG00000006066pabpc1b10088.170ENSFHEG00000008186pabpc1b10088.013Fundulus_heteroclitus
ENSMALG00000006066pabpc1b10079.751ENSGMOG00000002448-10079.751Gadus_morhua
ENSMALG00000006066pabpc1b10082.844ENSGMOG00000013448pabpc1a10082.071Gadus_morhua
ENSMALG00000006066pabpc1b10087.252ENSGAFG00000019750pabpc1a10087.252Gambusia_affinis
ENSMALG00000006066pabpc1b10093.740ENSGAFG00000010193pabpc1b10093.740Gambusia_affinis
ENSMALG00000006066pabpc1b10085.400ENSGACG00000003572pabpc1a10083.673Gasterosteus_aculeatus
ENSMALG00000006066pabpc1b9988.739ENSGACG00000003771pabpc1b9991.081Gasterosteus_aculeatus
ENSMALG00000006066pabpc1b6379.082ENSGGOG00000043933-9879.082Gorilla_gorilla
ENSMALG00000006066pabpc1b6379.082ENSGGOG00000038606-9879.082Gorilla_gorilla
ENSMALG00000006066pabpc1b9987.478ENSHBUG00000020487pabpc1a10087.478Haplochromis_burtoni
ENSMALG00000006066pabpc1b10089.362ENSHBUG00000002075pabpc1b10090.180Haplochromis_burtoni
ENSMALG00000006066pabpc1b6479.082ENSHGLG00000019668-9879.082Heterocephalus_glaber_female
ENSMALG00000006066pabpc1b6479.082ENSHGLG00000019762-9879.082Heterocephalus_glaber_female
ENSMALG00000006066pabpc1b6479.082ENSHGLG00100020854-9879.082Heterocephalus_glaber_male
ENSMALG00000006066pabpc1b9874.028ENSHCOG00000003175pabpc1b9974.028Hippocampus_comes
ENSMALG00000006066pabpc1b10085.086ENSHCOG00000013502pabpc1a10083.203Hippocampus_comes
ENSMALG00000006066pabpc1b8155.532ENSIPUG00000021244-6555.532Ictalurus_punctatus
ENSMALG00000006066pabpc1b8855.224ENSIPUG00000018724-8655.224Ictalurus_punctatus
ENSMALG00000006066pabpc1b10089.517ENSIPUG00000010791-10089.517Ictalurus_punctatus
ENSMALG00000006066pabpc1b10084.810ENSIPUG00000008848pabpc1a10084.810Ictalurus_punctatus
ENSMALG00000006066pabpc1b6479.592ENSSTOG00000026028-9879.592Ictidomys_tridecemlineatus
ENSMALG00000006066pabpc1b6479.592ENSSTOG00000022096-9879.592Ictidomys_tridecemlineatus
ENSMALG00000006066pabpc1b6378.571ENSJJAG00000007037-9878.571Jaculus_jaculus
ENSMALG00000006066pabpc1b10085.086ENSKMAG00000000605pabpc1a10084.929Kryptolebias_marmoratus
ENSMALG00000006066pabpc1b10091.327ENSKMAG00000008049pabpc1b10091.327Kryptolebias_marmoratus
ENSMALG00000006066pabpc1b10089.100ENSLBEG00000026845pabpc1b10088.942Labrus_bergylta
ENSMALG00000006066pabpc1b10085.243ENSLBEG00000024002-10083.673Labrus_bergylta
ENSMALG00000006066pabpc1b6478.462ENSLAFG00000023096-9878.462Loxodonta_africana
ENSMALG00000006066pabpc1b6378.680ENSMFAG00000028878-9878.680Macaca_fascicularis
ENSMALG00000006066pabpc1b6379.082ENSMMUG00000039929-9879.082Macaca_mulatta
ENSMALG00000006066pabpc1b6379.082ENSMMUG00000009740-9879.082Macaca_mulatta
ENSMALG00000006066pabpc1b6379.082ENSMMUG00000037681-9879.082Macaca_mulatta
ENSMALG00000006066pabpc1b6379.082ENSMNEG00000037732-9879.082Macaca_nemestrina
ENSMALG00000006066pabpc1b6379.082ENSMLEG00000027495-9879.082Mandrillus_leucophaeus
ENSMALG00000006066pabpc1b10085.086ENSMAMG00000004502-10085.331Mastacembelus_armatus
ENSMALG00000006066pabpc1b10090.063ENSMAMG00000014610pabpc1b10088.907Mastacembelus_armatus
ENSMALG00000006066pabpc1b10089.117ENSMZEG00005026745pabpc1b10087.224Maylandia_zebra
ENSMALG00000006066pabpc1b9987.478ENSMZEG00005025416pabpc1a10087.478Maylandia_zebra
ENSMALG00000006066pabpc1b6379.082ENSMICG00000047642-9879.082Microcebus_murinus
ENSMALG00000006066pabpc1b10090.101ENSMMOG00000018009pabpc1b10090.268Mola_mola
ENSMALG00000006066pabpc1b10086.824ENSMMOG00000018044pabpc1a10086.824Mola_mola
ENSMALG00000006066pabpc1b9964.286ENSMODG00000015024-9963.333Monodelphis_domestica
ENSMALG00000006066pabpc1b9870.947ENSMODG00000013156-9870.947Monodelphis_domestica
ENSMALG00000006066pabpc1b6381.421ENSNGAG00000012688-9878.571Nannospalax_galili
ENSMALG00000006066pabpc1b10090.484ENSNBRG00000013737pabpc1b10091.261Neolamprologus_brichardi
ENSMALG00000006066pabpc1b9987.478ENSNBRG00000003068-10087.478Neolamprologus_brichardi
ENSMALG00000006066pabpc1b6379.082ENSNLEG00000018128-9879.082Nomascus_leucogenys
ENSMALG00000006066pabpc1b6378.571ENSODEG00000018540-9878.571Octodon_degus
ENSMALG00000006066pabpc1b10088.959ENSONIG00000002717pabpc1b10088.801Oreochromis_niloticus
ENSMALG00000006066pabpc1b10084.929ENSONIG00000006871-10083.046Oreochromis_niloticus
ENSMALG00000006066pabpc1b6479.082ENSOCUG00000002565-9879.082Oryctolagus_cuniculus
ENSMALG00000006066pabpc1b10084.458ENSORLG00000002691pabpc1a10084.458Oryzias_latipes
ENSMALG00000006066pabpc1b10083.043ENSORLG00000003008-10083.043Oryzias_latipes
ENSMALG00000006066pabpc1b10083.043ENSORLG00020022259-10083.043Oryzias_latipes_hni
ENSMALG00000006066pabpc1b10084.615ENSORLG00020022398pabpc1a10084.615Oryzias_latipes_hni
ENSMALG00000006066pabpc1b10084.458ENSORLG00015013633pabpc110084.458Oryzias_latipes_hsok
ENSMALG00000006066pabpc1b10083.201ENSORLG00015010932-10083.201Oryzias_latipes_hsok
ENSMALG00000006066pabpc1b10085.243ENSOMEG00000020219pabpc1a10083.673Oryzias_melastigma
ENSMALG00000006066pabpc1b9981.216ENSOMEG00000013627pabpc1b10081.216Oryzias_melastigma
ENSMALG00000006066pabpc1b6479.082ENSOGAG00000029513-9879.082Otolemur_garnettii
ENSMALG00000006066pabpc1b6479.082ENSOGAG00000026047-9879.082Otolemur_garnettii
ENSMALG00000006066pabpc1b6479.082ENSOARG00000005943-9879.082Ovis_aries
ENSMALG00000006066pabpc1b6379.082ENSPPAG00000012920-9879.082Pan_paniscus
ENSMALG00000006066pabpc1b6479.082ENSPPRG00000011809-9879.082Panthera_pardus
ENSMALG00000006066pabpc1b6479.082ENSPPRG00000011804-9879.082Panthera_pardus
ENSMALG00000006066pabpc1b6379.082ENSPTRG00000028252-9879.082Pan_troglodytes
ENSMALG00000006066pabpc1b6379.082ENSPANG00000011549-9879.082Papio_anubis
ENSMALG00000006066pabpc1b10088.819ENSPKIG00000005676pabpc1b10086.929Paramormyrops_kingsleyae
ENSMALG00000006066pabpc1b7693.946ENSPMGG00000023134-9793.946Periophthalmus_magnuspinnatus
ENSMALG00000006066pabpc1b7692.377ENSPMGG00000022487pabpc1a9292.377Periophthalmus_magnuspinnatus
ENSMALG00000006066pabpc1b9869.404ENSPCIG00000016995-5569.404Phascolarctos_cinereus
ENSMALG00000006066pabpc1b10091.770ENSPFOG00000010815pabpc1a10082.280Poecilia_formosa
ENSMALG00000006066pabpc1b10089.274ENSPFOG00000005917pabpc1b10089.117Poecilia_formosa
ENSMALG00000006066pabpc1b10085.400ENSPLAG00000004114pabpc1a10083.673Poecilia_latipinna
ENSMALG00000006066pabpc1b10089.432ENSPLAG00000001388pabpc1b10089.274Poecilia_latipinna
ENSMALG00000006066pabpc1b10089.274ENSPMEG00000014399pabpc1b10089.117Poecilia_mexicana
ENSMALG00000006066pabpc1b10085.400ENSPMEG00000001334pabpc1a10083.673Poecilia_mexicana
ENSMALG00000006066pabpc1b10088.667ENSPREG00000019595pabpc1a10088.833Poecilia_reticulata
ENSMALG00000006066pabpc1b10093.410ENSPREG00000010911pabpc1b10093.410Poecilia_reticulata
ENSMALG00000006066pabpc1b6479.082ENSPPYG00000020468-9879.082Pongo_abelii
ENSMALG00000006066pabpc1b6479.082ENSPCAG00000005308-9879.082Procavia_capensis
ENSMALG00000006066pabpc1b6379.592ENSPCOG00000026349-9879.592Propithecus_coquereli
ENSMALG00000006066pabpc1b6479.487ENSPVAG00000016117-9879.487Pteropus_vampyrus
ENSMALG00000006066pabpc1b9986.403ENSPNYG00000005192pabpc1a10086.874Pundamilia_nyererei
ENSMALG00000006066pabpc1b10089.362ENSPNYG00000012578pabpc1b10090.180Pundamilia_nyererei
ENSMALG00000006066pabpc1b10088.870ENSPNAG00000028408pabpc1a10088.870Pygocentrus_nattereri
ENSMALG00000006066pabpc1b10087.874ENSPNAG00000024626pabpc1b10087.559Pygocentrus_nattereri
ENSMALG00000006066pabpc1b9978.114ENSRBIG00000028738-9974.914Rhinopithecus_bieti
ENSMALG00000006066pabpc1b6379.082ENSRBIG00000027173-9879.082Rhinopithecus_bieti
ENSMALG00000006066pabpc1b6379.082ENSRROG00000017404-9879.082Rhinopithecus_roxellana
ENSMALG00000006066pabpc1b9762.641ENSSHAG00000000511-10062.480Sarcophilus_harrisii
ENSMALG00000006066pabpc1b10085.039ENSSFOG00015006662pabpc1a10082.835Scleropages_formosus
ENSMALG00000006066pabpc1b10088.801ENSSFOG00015002752-10086.909Scleropages_formosus
ENSMALG00000006066pabpc1b7680.347ENSSFOG00015019668-9180.347Scleropages_formosus
ENSMALG00000006066pabpc1b10084.929ENSSMAG00000010803pabpc1a10083.046Scophthalmus_maximus
ENSMALG00000006066pabpc1b10088.801ENSSMAG00000006869pabpc1b10088.644Scophthalmus_maximus
ENSMALG00000006066pabpc1b10088.310ENSSDUG00000011965pabpc1b10087.322Seriola_dumerili
ENSMALG00000006066pabpc1b10085.400ENSSDUG00000006675pabpc1a10083.673Seriola_dumerili
ENSMALG00000006066pabpc1b10090.125ENSSLDG00000014156pabpc1b10088.871Seriola_lalandi_dorsalis
ENSMALG00000006066pabpc1b10085.400ENSSLDG00000011661pabpc1a10083.673Seriola_lalandi_dorsalis
ENSMALG00000006066pabpc1b10085.086ENSSPAG00000014453-10083.203Stegastes_partitus
ENSMALG00000006066pabpc1b10097.260ENSSPAG00000019265pabpc1b10097.260Stegastes_partitus
ENSMALG00000006066pabpc1b6379.082ENSSSCG00000036336-9879.082Sus_scrofa
ENSMALG00000006066pabpc1b6379.082ENSSSCG00000032167-9879.082Sus_scrofa
ENSMALG00000006066pabpc1b10084.483ENSTRUG00000011577-10082.915Takifugu_rubripes
ENSMALG00000006066pabpc1b10085.512ENSTRUG00000003767-10085.354Takifugu_rubripes
ENSMALG00000006066pabpc1b10085.110ENSTNIG00000009153pabpc1b10085.110Tetraodon_nigroviridis
ENSMALG00000006066pabpc1b10081.607ENSTNIG00000013307pabpc1a10080.216Tetraodon_nigroviridis
ENSMALG00000006066pabpc1b6479.082ENSTTRG00000013181-9879.082Tursiops_truncatus
ENSMALG00000006066pabpc1b6379.082ENSUAMG00000008089-9879.082Ursus_americanus
ENSMALG00000006066pabpc1b6379.082ENSUMAG00000003364-9879.082Ursus_maritimus
ENSMALG00000006066pabpc1b9655.000ENSUMAG00000023926-8968.232Ursus_maritimus
ENSMALG00000006066pabpc1b6478.000ENSVVUG00000015892-9778.000Vulpes_vulpes
ENSMALG00000006066pabpc1b9945.238ENSXETG00000015439-10045.238Xenopus_tropicalis
ENSMALG00000006066pabpc1b10085.855ENSXCOG00000017066pabpc1a10086.567Xiphophorus_couchianus
ENSMALG00000006066pabpc1b10093.092ENSXCOG00000019901pabpc1b10093.092Xiphophorus_couchianus
ENSMALG00000006066pabpc1b10085.243ENSXMAG00000002555pabpc1a10085.550Xiphophorus_maculatus
ENSMALG00000006066pabpc1b10089.590ENSXMAG00000003753pabpc1b10089.432Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us