EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000006174 (Gene tree)
Gene ID: 109958720
Gene Symbol: sf3b4
Alias: chunp6902|fb36a04|wu:fb36a04
Full Name: splicing factor 3b subunit 4
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 5026 bases
Position: chrKV884722.1:975958-980983
Accession: 109958720
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000008674	RRM_1	PF00076.22	3e-39	1	2
ENSMALP00000008674	RRM_1	PF00076.22	3e-39	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000008855	-	2603	XM_020597594	ENSMALP00000008674	402 (aa)	XP_020453250	UPI0009B3AF14

Gene Model

Click here to download ENSMALG00000006174's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000006174's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000006174	sf3b4	55	39.773	ENSMALG00000021622	pabpc1l	60	39.634

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000006174	sf3b4	57	97.368	ENSG00000143368	SF3B4	89	100.000	Homo_sapiens
ENSMALG00000006174	sf3b4	60	98.765	ENSAPOG00000017647	sf3b4	67	95.911	Acanthochromis_polyacanthus
ENSMALG00000006174	sf3b4	57	97.368	ENSAMEG00000010073	SF3B4	54	97.797	Ailuropoda_melanoleuca
ENSMALG00000006174	sf3b4	57	97.403	ENSACIG00000018455	sf3b4	67	99.115	Amphilophus_citrinellus
ENSMALG00000006174	sf3b4	60	98.354	ENSAOCG00000019801	sf3b4	67	95.167	Amphiprion_ocellaris
ENSMALG00000006174	sf3b4	60	98.354	ENSAPEG00000010365	sf3b4	67	95.167	Amphiprion_percula
ENSMALG00000006174	sf3b4	100	93.797	ENSATEG00000012844	sf3b4	81	94.512	Anabas_testudineus
ENSMALG00000006174	sf3b4	53	100.000	ENSACAG00000010019	SF3B4	54	98.673	Anolis_carolinensis
ENSMALG00000006174	sf3b4	57	97.368	ENSANAG00000031025	SF3B4	54	97.797	Aotus_nancymaae
ENSMALG00000006174	sf3b4	66	95.833	ENSACLG00000014260	sf3b4	66	95.833	Astatotilapia_calliptera
ENSMALG00000006174	sf3b4	60	97.119	ENSAMXG00000008282	sf3b4	62	96.800	Astyanax_mexicanus
ENSMALG00000006174	sf3b4	57	97.368	ENSBTAG00000012495	SF3B4	54	97.797	Bos_taurus
ENSMALG00000006174	sf3b4	57	97.368	ENSCAFG00000011617	SF3B4	54	97.797	Canis_familiaris
ENSMALG00000006174	sf3b4	57	97.368	ENSCAFG00020019775	SF3B4	54	97.797	Canis_lupus_dingo
ENSMALG00000006174	sf3b4	57	97.368	ENSCHIG00000025663	-	54	97.797	Capra_hircus
ENSMALG00000006174	sf3b4	73	59.539	ENSCHIG00000006654	-	50	74.627	Capra_hircus
ENSMALG00000006174	sf3b4	57	97.368	ENSTSYG00000009295	SF3B4	54	97.797	Carlito_syrichta
ENSMALG00000006174	sf3b4	57	97.368	ENSCPOG00000008267	SF3B4	54	97.797	Cavia_porcellus
ENSMALG00000006174	sf3b4	57	96.491	ENSCCAG00000021751	-	51	96.916	Cebus_capucinus
ENSMALG00000006174	sf3b4	57	97.368	ENSCATG00000033114	SF3B4	54	97.797	Cercocebus_atys
ENSMALG00000006174	sf3b4	57	97.368	ENSCLAG00000015851	SF3B4	54	97.797	Chinchilla_lanigera
ENSMALG00000006174	sf3b4	57	97.368	ENSCSAG00000018129	SF3B4	54	97.797	Chlorocebus_sabaeus
ENSMALG00000006174	sf3b4	53	100.000	ENSCPBG00000008041	SF3B4	54	98.238	Chrysemys_picta_bellii
ENSMALG00000006174	sf3b4	56	88.393	ENSCING00000002337	-	57	90.610	Ciona_intestinalis
ENSMALG00000006174	sf3b4	52	91.429	ENSCSAVG00000007809	-	89	89.820	Ciona_savignyi
ENSMALG00000006174	sf3b4	57	97.368	ENSCANG00000035579	SF3B4	54	97.797	Colobus_angolensis_palliatus
ENSMALG00000006174	sf3b4	57	97.368	ENSCGRG00001003590	Sf3b4	54	97.797	Cricetulus_griseus_chok1gshd
ENSMALG00000006174	sf3b4	57	97.368	ENSCGRG00000016914	Sf3b4	54	97.797	Cricetulus_griseus_crigri
ENSMALG00000006174	sf3b4	66	95.094	ENSCVAG00000005536	sf3b4	58	96.916	Cyprinodon_variegatus
ENSMALG00000006174	sf3b4	60	97.119	ENSDARG00000018574	sf3b4	68	93.704	Danio_rerio
ENSMALG00000006174	sf3b4	55	91.818	ENSDNOG00000048908	-	52	92.237	Dasypus_novemcinctus
ENSMALG00000006174	sf3b4	97	64.750	ENSDNOG00000037231	-	50	87.245	Dasypus_novemcinctus
ENSMALG00000006174	sf3b4	57	97.368	ENSDORG00000016366	Sf3b4	54	97.797	Dipodomys_ordii
ENSMALG00000006174	sf3b4	74	68.227	FBgn0015818	Spx	61	88.263	Drosophila_melanogaster
ENSMALG00000006174	sf3b4	57	87.281	ENSETEG00000008963	SF3B4	53	87.665	Echinops_telfairi
ENSMALG00000006174	sf3b4	57	97.368	ENSEASG00005001477	SF3B4	54	97.797	Equus_asinus_asinus
ENSMALG00000006174	sf3b4	57	97.368	ENSECAG00000024737	SF3B4	54	97.797	Equus_caballus
ENSMALG00000006174	sf3b4	87	90.286	ENSELUG00000012876	sf3b4	67	94.796	Esox_lucius
ENSMALG00000006174	sf3b4	57	97.368	ENSFCAG00000010106	SF3B4	54	97.797	Felis_catus
ENSMALG00000006174	sf3b4	57	97.368	ENSFDAG00000009286	SF3B4	54	97.797	Fukomys_damarensis
ENSMALG00000006174	sf3b4	57	98.253	ENSGMOG00000002519	sf3b4	67	98.238	Gadus_morhua
ENSMALG00000006174	sf3b4	53	100.000	ENSGALG00000013352	SF3B4	54	98.678	Gallus_gallus
ENSMALG00000006174	sf3b4	66	95.849	ENSGAFG00000010181	sf3b4	68	95.149	Gambusia_affinis
ENSMALG00000006174	sf3b4	56	99.559	ENSGACG00000003819	sf3b4	57	99.559	Gasterosteus_aculeatus
ENSMALG00000006174	sf3b4	57	97.368	ENSGGOG00000004761	SF3B4	54	97.797	Gorilla_gorilla
ENSMALG00000006174	sf3b4	76	70.032	ENSGGOG00000038845	-	54	89.151	Gorilla_gorilla
ENSMALG00000006174	sf3b4	66	95.833	ENSHBUG00000002028	sf3b4	66	95.833	Haplochromis_burtoni
ENSMALG00000006174	sf3b4	57	97.368	ENSHGLG00000012360	SF3B4	54	97.797	Heterocephalus_glaber_female
ENSMALG00000006174	sf3b4	57	97.368	ENSHGLG00100008533	SF3B4	54	97.797	Heterocephalus_glaber_male
ENSMALG00000006174	sf3b4	56	97.357	ENSHCOG00000003014	sf3b4	57	97.357	Hippocampus_comes
ENSMALG00000006174	sf3b4	60	97.531	ENSIPUG00000012242	Sf3b4	68	93.704	Ictalurus_punctatus
ENSMALG00000006174	sf3b4	57	97.368	ENSSTOG00000000684	-	54	97.797	Ictidomys_tridecemlineatus
ENSMALG00000006174	sf3b4	56	70.370	ENSJJAG00000022500	Sf3b4	53	70.896	Jaculus_jaculus
ENSMALG00000006174	sf3b4	67	95.522	ENSKMAG00000008154	sf3b4	68	95.522	Kryptolebias_marmoratus
ENSMALG00000006174	sf3b4	58	98.283	ENSLBEG00000026818	sf3b4	57	99.559	Labrus_bergylta
ENSMALG00000006174	sf3b4	60	95.417	ENSLACG00000004436	SF3B4	66	95.417	Latimeria_chalumnae
ENSMALG00000006174	sf3b4	60	97.917	ENSLOCG00000009048	sf3b4	57	97.917	Lepisosteus_oculatus
ENSMALG00000006174	sf3b4	57	97.368	ENSLAFG00000008531	SF3B4	53	97.797	Loxodonta_africana
ENSMALG00000006174	sf3b4	57	97.368	ENSMFAG00000042395	SF3B4	54	97.797	Macaca_fascicularis
ENSMALG00000006174	sf3b4	89	60.434	ENSMFAG00000039067	-	53	80.000	Macaca_fascicularis
ENSMALG00000006174	sf3b4	57	97.368	ENSMMUG00000007256	SF3B4	54	97.797	Macaca_mulatta
ENSMALG00000006174	sf3b4	57	97.368	ENSMNEG00000031839	SF3B4	54	97.797	Macaca_nemestrina
ENSMALG00000006174	sf3b4	89	59.677	ENSMNEG00000031526	-	53	79.500	Macaca_nemestrina
ENSMALG00000006174	sf3b4	57	97.368	ENSMLEG00000038667	SF3B4	54	97.797	Mandrillus_leucophaeus
ENSMALG00000006174	sf3b4	82	95.427	ENSMAMG00000014692	sf3b4	82	95.427	Mastacembelus_armatus
ENSMALG00000006174	sf3b4	66	95.833	ENSMZEG00005026741	sf3b4	66	95.833	Maylandia_zebra
ENSMALG00000006174	sf3b4	53	100.000	ENSMGAG00000000653	SF3B4	55	98.678	Meleagris_gallopavo
ENSMALG00000006174	sf3b4	57	97.368	ENSMAUG00000015266	Sf3b4	54	97.797	Mesocricetus_auratus
ENSMALG00000006174	sf3b4	57	97.368	ENSMICG00000044961	SF3B4	54	97.797	Microcebus_murinus
ENSMALG00000006174	sf3b4	57	97.368	ENSMOCG00000013658	-	54	97.797	Microtus_ochrogaster
ENSMALG00000006174	sf3b4	51	98.049	ENSMOCG00000014155	-	54	95.413	Microtus_ochrogaster
ENSMALG00000006174	sf3b4	57	98.261	ENSMMOG00000018032	sf3b4	58	99.119	Mola_mola
ENSMALG00000006174	sf3b4	57	97.368	ENSMODG00000018767	SF3B4	54	97.797	Monodelphis_domestica
ENSMALG00000006174	sf3b4	57	97.368	MGP_CAROLIEiJ_G0025365	Sf3b4	54	97.797	Mus_caroli
ENSMALG00000006174	sf3b4	57	97.368	ENSMUSG00000068856	Sf3b4	54	97.797	Mus_musculus
ENSMALG00000006174	sf3b4	57	97.368	MGP_PahariEiJ_G0026809	Sf3b4	54	97.797	Mus_pahari
ENSMALG00000006174	sf3b4	57	97.368	MGP_SPRETEiJ_G0026309	Sf3b4	54	97.797	Mus_spretus
ENSMALG00000006174	sf3b4	57	97.368	ENSMPUG00000005563	SF3B4	54	97.797	Mustela_putorius_furo
ENSMALG00000006174	sf3b4	57	97.368	ENSMLUG00000010789	SF3B4	54	97.797	Myotis_lucifugus
ENSMALG00000006174	sf3b4	57	97.368	ENSNGAG00000016337	Sf3b4	54	97.797	Nannospalax_galili
ENSMALG00000006174	sf3b4	66	95.076	ENSNBRG00000013865	sf3b4	66	95.076	Neolamprologus_brichardi
ENSMALG00000006174	sf3b4	90	67.109	ENSNLEG00000000537	-	58	88.546	Nomascus_leucogenys
ENSMALG00000006174	sf3b4	57	92.982	ENSOPRG00000010808	SF3B4	54	93.392	Ochotona_princeps
ENSMALG00000006174	sf3b4	91	58.047	ENSODEG00000008916	-	55	76.415	Octodon_degus
ENSMALG00000006174	sf3b4	66	95.833	ENSONIG00000002730	sf3b4	66	95.833	Oreochromis_niloticus
ENSMALG00000006174	sf3b4	57	97.368	ENSOCUG00000004614	SF3B4	54	97.797	Oryctolagus_cuniculus
ENSMALG00000006174	sf3b4	87	86.895	ENSORLG00000003062	sf3b4	58	99.115	Oryzias_latipes
ENSMALG00000006174	sf3b4	74	88.411	ENSORLG00020000687	sf3b4	57	99.115	Oryzias_latipes_hni
ENSMALG00000006174	sf3b4	74	88.411	ENSORLG00015010989	sf3b4	57	99.115	Oryzias_latipes_hsok
ENSMALG00000006174	sf3b4	58	97.414	ENSOMEG00000013694	sf3b4	57	99.115	Oryzias_melastigma
ENSMALG00000006174	sf3b4	57	97.368	ENSOGAG00000006265	SF3B4	54	97.797	Otolemur_garnettii
ENSMALG00000006174	sf3b4	57	97.368	ENSOARG00000020718	-	54	97.797	Ovis_aries
ENSMALG00000006174	sf3b4	61	77.869	ENSOARG00000007368	-	51	83.254	Ovis_aries
ENSMALG00000006174	sf3b4	76	72.981	ENSPPAG00000030024	-	55	87.225	Pan_paniscus
ENSMALG00000006174	sf3b4	57	97.368	ENSPPAG00000040904	SF3B4	54	97.797	Pan_paniscus
ENSMALG00000006174	sf3b4	57	97.368	ENSPPRG00000007384	SF3B4	54	97.797	Panthera_pardus
ENSMALG00000006174	sf3b4	57	97.368	ENSPTIG00000014530	SF3B4	54	97.797	Panthera_tigris_altaica
ENSMALG00000006174	sf3b4	76	74.757	ENSPTRG00000049727	-	57	87.665	Pan_troglodytes
ENSMALG00000006174	sf3b4	57	97.368	ENSPTRG00000001243	SF3B4	54	97.797	Pan_troglodytes
ENSMALG00000006174	sf3b4	57	97.368	ENSPANG00000005126	SF3B4	54	97.797	Papio_anubis
ENSMALG00000006174	sf3b4	60	97.531	ENSPKIG00000020669	sf3b4	71	94.424	Paramormyrops_kingsleyae
ENSMALG00000006174	sf3b4	57	97.368	ENSPEMG00000017568	Sf3b4	54	97.797	Peromyscus_maniculatus_bairdii
ENSMALG00000006174	sf3b4	53	95.305	ENSPMAG00000007842	-	50	95.305	Petromyzon_marinus
ENSMALG00000006174	sf3b4	57	97.368	ENSPCIG00000008765	SF3B4	54	97.797	Phascolarctos_cinereus
ENSMALG00000006174	sf3b4	66	96.255	ENSPFOG00000005754	sf3b4	68	96.255	Poecilia_formosa
ENSMALG00000006174	sf3b4	66	96.255	ENSPLAG00000001401	sf3b4	74	95.896	Poecilia_latipinna
ENSMALG00000006174	sf3b4	68	94.182	ENSPREG00000011076	sf3b4	67	95.149	Poecilia_reticulata
ENSMALG00000006174	sf3b4	52	96.635	ENSPCAG00000000392	SF3B4	50	96.635	Procavia_capensis
ENSMALG00000006174	sf3b4	57	97.368	ENSPCOG00000015399	SF3B4	54	97.797	Propithecus_coquereli
ENSMALG00000006174	sf3b4	57	97.368	ENSPVAG00000014171	SF3B4	54	97.797	Pteropus_vampyrus
ENSMALG00000006174	sf3b4	66	95.833	ENSPNYG00000012700	sf3b4	66	95.833	Pundamilia_nyererei
ENSMALG00000006174	sf3b4	60	97.942	ENSPNAG00000000686	sf3b4	69	94.444	Pygocentrus_nattereri
ENSMALG00000006174	sf3b4	57	97.368	ENSRNOG00000021181	Sf3b4	54	97.797	Rattus_norvegicus
ENSMALG00000006174	sf3b4	57	97.368	ENSRBIG00000043392	SF3B4	54	97.797	Rhinopithecus_bieti
ENSMALG00000006174	sf3b4	57	97.368	ENSRROG00000029366	SF3B4	54	97.797	Rhinopithecus_roxellana
ENSMALG00000006174	sf3b4	92	57.853	ENSRROG00000028213	-	51	75.122	Rhinopithecus_roxellana
ENSMALG00000006174	sf3b4	57	96.930	ENSSBOG00000012310	-	54	97.357	Saimiri_boliviensis_boliviensis
ENSMALG00000006174	sf3b4	57	92.544	ENSSHAG00000004043	SF3B4	53	92.952	Sarcophilus_harrisii
ENSMALG00000006174	sf3b4	60	97.531	ENSSFOG00015008864	sf3b4	66	94.424	Scleropages_formosus
ENSMALG00000006174	sf3b4	85	90.936	ENSSMAG00000006837	sf3b4	67	95.167	Scophthalmus_maximus
ENSMALG00000006174	sf3b4	82	93.902	ENSSDUG00000012064	sf3b4	81	93.902	Seriola_dumerili
ENSMALG00000006174	sf3b4	82	94.207	ENSSLDG00000014226	sf3b4	81	94.207	Seriola_lalandi_dorsalis
ENSMALG00000006174	sf3b4	60	97.942	ENSSPAG00000019219	sf3b4	72	93.814	Stegastes_partitus
ENSMALG00000006174	sf3b4	79	56.698	ENSSSCG00000039440	-	50	64.789	Sus_scrofa
ENSMALG00000006174	sf3b4	76	78.019	ENSSSCG00000006665	-	54	97.797	Sus_scrofa
ENSMALG00000006174	sf3b4	59	95.781	ENSTGUG00000004470	SF3B4	89	98.238	Taeniopygia_guttata
ENSMALG00000006174	sf3b4	79	88.401	ENSTRUG00000004516	sf3b4	57	98.678	Takifugu_rubripes
ENSMALG00000006174	sf3b4	57	98.690	ENSTNIG00000009156	sf3b4	58	99.119	Tetraodon_nigroviridis
ENSMALG00000006174	sf3b4	57	97.368	ENSTTRG00000005217	SF3B4	54	97.797	Tursiops_truncatus
ENSMALG00000006174	sf3b4	57	97.368	ENSUAMG00000022468	SF3B4	54	97.797	Ursus_americanus
ENSMALG00000006174	sf3b4	57	97.368	ENSUMAG00000003802	SF3B4	54	97.797	Ursus_maritimus
ENSMALG00000006174	sf3b4	54	97.222	ENSVPAG00000008152	SF3B4	52	97.674	Vicugna_pacos
ENSMALG00000006174	sf3b4	76	80.984	ENSXETG00000011038	sf3b4	54	100.000	Xenopus_tropicalis
ENSMALG00000006174	sf3b4	66	95.880	ENSXCOG00000019895	sf3b4	69	95.522	Xiphophorus_couchianus
ENSMALG00000006174	sf3b4	66	96.226	ENSXMAG00000003772	sf3b4	68	95.880	Xiphophorus_maculatus