EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000006419 (Gene tree)
Gene ID: 109968182
Gene Symbol: rbm28
Alias: zgc:56258
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 9564 bases
Position: chrKV884693.1:1310473-1320036
Accession: 109968182
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000009007	RRM_1	PF00076.22	1.8e-57	1	4
ENSMALP00000009007	RRM_1	PF00076.22	1.8e-57	2	4
ENSMALP00000009007	RRM_1	PF00076.22	1.8e-57	3	4
ENSMALP00000009007	RRM_1	PF00076.22	1.8e-57	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000009196	-	4165	XM_020614258	ENSMALP00000009007	767 (aa)	XP_020469914	UPI0009B44F44

Gene Model

Click here to download ENSMALG00000006419's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000006419's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000006419	rbm28	100	49.310	ENSG00000106344	RBM28	100	48.039	Homo_sapiens
ENSMALG00000006419	rbm28	56	76.818	ENSAPOG00000015512	rbm28	59	76.718	Acanthochromis_polyacanthus
ENSMALG00000006419	rbm28	97	62.069	ENSAMEG00000004776	RBM28	64	64.103	Ailuropoda_melanoleuca
ENSMALG00000006419	rbm28	55	74.109	ENSACIG00000023153	rbm28	91	74.109	Amphilophus_citrinellus
ENSMALG00000006419	rbm28	56	77.045	ENSAOCG00000000462	rbm28	100	69.638	Amphiprion_ocellaris
ENSMALG00000006419	rbm28	100	71.189	ENSAPEG00000012996	rbm28	100	71.059	Amphiprion_percula
ENSMALG00000006419	rbm28	91	69.874	ENSATEG00000001672	rbm28	91	69.874	Anabas_testudineus
ENSMALG00000006419	rbm28	100	47.804	ENSANAG00000033922	RBM28	81	52.222	Aotus_nancymaae
ENSMALG00000006419	rbm28	100	68.293	ENSACLG00000025024	rbm28	59	75.991	Astatotilapia_calliptera
ENSMALG00000006419	rbm28	57	60.183	ENSAMXG00000000763	rbm28	99	60.870	Astyanax_mexicanus
ENSMALG00000006419	rbm28	72	65.000	ENSBTAG00000017001	RBM28	79	65.000	Bos_taurus
ENSMALG00000006419	rbm28	100	48.923	ENSCJAG00000017731	RBM28	82	51.778	Callithrix_jacchus
ENSMALG00000006419	rbm28	100	48.914	ENSCAFG00000001667	RBM28	58	53.950	Canis_familiaris
ENSMALG00000006419	rbm28	100	48.914	ENSCAFG00020021648	RBM28	58	53.950	Canis_lupus_dingo
ENSMALG00000006419	rbm28	62	51.245	ENSCHIG00000014146	RBM28	59	53.452	Capra_hircus
ENSMALG00000006419	rbm28	65	62.500	ENSTSYG00000002892	RBM28	78	62.500	Carlito_syrichta
ENSMALG00000006419	rbm28	76	40.134	ENSCAPG00000013218	RBM28	56	39.791	Cavia_aperea
ENSMALG00000006419	rbm28	61	51.738	ENSCPOG00000006253	RBM28	58	53.362	Cavia_porcellus
ENSMALG00000006419	rbm28	70	50.725	ENSCCAG00000035105	RBM28	80	52.222	Cebus_capucinus
ENSMALG00000006419	rbm28	69	65.000	ENSCATG00000040497	RBM28	77	65.000	Cercocebus_atys
ENSMALG00000006419	rbm28	61	51.695	ENSCLAG00000003707	RBM28	61	53.468	Chinchilla_lanigera
ENSMALG00000006419	rbm28	63	51.606	ENSCSAG00000010161	RBM28	58	54.102	Chlorocebus_sabaeus
ENSMALG00000006419	rbm28	55	56.452	ENSCHOG00000001994	-	63	56.452	Choloepus_hoffmanni
ENSMALG00000006419	rbm28	50	48.630	ENSCPBG00000018088	RBM28	78	49.762	Chrysemys_picta_bellii
ENSMALG00000006419	rbm28	90	51.075	ENSCANG00000038397	RBM28	72	65.000	Colobus_angolensis_palliatus
ENSMALG00000006419	rbm28	63	52.113	ENSCGRG00001021278	Rbm28	56	54.444	Cricetulus_griseus_chok1gshd
ENSMALG00000006419	rbm28	63	52.113	ENSCGRG00000005098	Rbm28	57	54.444	Cricetulus_griseus_crigri
ENSMALG00000006419	rbm28	100	64.607	ENSCSEG00000004212	rbm28	100	64.736	Cynoglossus_semilaevis
ENSMALG00000006419	rbm28	99	64.812	ENSCVAG00000010493	rbm28	99	64.812	Cyprinodon_variegatus
ENSMALG00000006419	rbm28	85	59.524	ENSDARG00000025332	rbm28	77	58.874	Danio_rerio
ENSMALG00000006419	rbm28	100	49.435	ENSDNOG00000001124	RBM28	58	53.587	Dasypus_novemcinctus
ENSMALG00000006419	rbm28	64	50.696	ENSDORG00000004184	Rbm28	86	53.675	Dipodomys_ordii
ENSMALG00000006419	rbm28	55	49.083	ENSETEG00000007130	RBM28	56	49.312	Echinops_telfairi
ENSMALG00000006419	rbm28	85	43.229	ENSEBUG00000004419	rbm28	95	43.779	Eptatretus_burgeri
ENSMALG00000006419	rbm28	64	51.927	ENSEASG00005008528	RBM28	57	53.725	Equus_asinus_asinus
ENSMALG00000006419	rbm28	64	51.724	ENSECAG00000007745	RBM28	57	53.499	Equus_caballus
ENSMALG00000006419	rbm28	64	46.813	ENSEEUG00000002389	RBM28	57	49.224	Erinaceus_europaeus
ENSMALG00000006419	rbm28	100	57.484	ENSELUG00000020602	rbm28	59	65.443	Esox_lucius
ENSMALG00000006419	rbm28	100	50.000	ENSFCAG00000000946	RBM28	79	65.000	Felis_catus
ENSMALG00000006419	rbm28	100	48.293	ENSFDAG00000010169	RBM28	59	53.659	Fukomys_damarensis
ENSMALG00000006419	rbm28	99	56.693	ENSGMOG00000007091	rbm28	93	62.727	Gadus_morhua
ENSMALG00000006419	rbm28	58	71.397	ENSGAFG00000004802	rbm28	98	71.397	Gambusia_affinis
ENSMALG00000006419	rbm28	57	71.719	ENSGACG00000012612	rbm28	100	63.636	Gasterosteus_aculeatus
ENSMALG00000006419	rbm28	77	61.497	ENSGAGG00000008873	RBM28	85	61.497	Gopherus_agassizii
ENSMALG00000006419	rbm28	63	52.008	ENSGGOG00000004644	RBM28	59	53.880	Gorilla_gorilla
ENSMALG00000006419	rbm28	94	67.989	ENSHBUG00000009611	rbm28	56	76.471	Haplochromis_burtoni
ENSMALG00000006419	rbm28	100	48.420	ENSHGLG00000005409	RBM28	59	52.550	Heterocephalus_glaber_female
ENSMALG00000006419	rbm28	100	48.420	ENSHGLG00100016458	RBM28	59	52.550	Heterocephalus_glaber_male
ENSMALG00000006419	rbm28	99	48.542	ENSHCOG00000010597	rbm28	93	56.854	Hippocampus_comes
ENSMALG00000006419	rbm28	60	47.495	ENSIPUG00000007103	rbm28	81	49.882	Ictalurus_punctatus
ENSMALG00000006419	rbm28	100	49.118	ENSSTOG00000002169	RBM28	57	54.484	Ictidomys_tridecemlineatus
ENSMALG00000006419	rbm28	78	58.011	ENSJJAG00000022400	Rbm28	93	52.914	Jaculus_jaculus
ENSMALG00000006419	rbm28	57	70.946	ENSKMAG00000013348	rbm28	58	70.946	Kryptolebias_marmoratus
ENSMALG00000006419	rbm28	58	73.543	ENSLBEG00000012998	rbm28	57	73.543	Labrus_bergylta
ENSMALG00000006419	rbm28	100	57.286	ENSLOCG00000015541	rbm28	76	61.693	Lepisosteus_oculatus
ENSMALG00000006419	rbm28	69	65.000	ENSMFAG00000031036	RBM28	77	65.000	Macaca_fascicularis
ENSMALG00000006419	rbm28	69	65.000	ENSMMUG00000007250	RBM28	77	65.000	Macaca_mulatta
ENSMALG00000006419	rbm28	100	50.318	ENSMNEG00000036970	RBM28	76	65.000	Macaca_nemestrina
ENSMALG00000006419	rbm28	81	50.813	ENSMLEG00000037717	RBM28	56	59.024	Mandrillus_leucophaeus
ENSMALG00000006419	rbm28	100	74.122	ENSMAMG00000008525	rbm28	100	74.219	Mastacembelus_armatus
ENSMALG00000006419	rbm28	93	67.355	ENSMZEG00005019625	rbm28	64	75.991	Maylandia_zebra
ENSMALG00000006419	rbm28	64	51.829	ENSMAUG00000002263	Rbm28	56	54.299	Mesocricetus_auratus
ENSMALG00000006419	rbm28	65	49.237	ENSMICG00000000107	RBM28	60	52.609	Microcebus_murinus
ENSMALG00000006419	rbm28	100	49.682	ENSMOCG00000014615	Rbm28	58	55.079	Microtus_ochrogaster
ENSMALG00000006419	rbm28	57	69.932	ENSMMOG00000008600	rbm28	91	69.526	Mola_mola
ENSMALG00000006419	rbm28	61	50.913	ENSMODG00000015151	RBM28	58	52.550	Monodelphis_domestica
ENSMALG00000006419	rbm28	100	48.416	MGP_CAROLIEiJ_G0028162	Rbm28	58	53.499	Mus_caroli
ENSMALG00000006419	rbm28	100	48.662	ENSMUSG00000029701	Rbm28	58	54.176	Mus_musculus
ENSMALG00000006419	rbm28	100	48.354	MGP_PahariEiJ_G0021920	Rbm28	58	54.176	Mus_pahari
ENSMALG00000006419	rbm28	100	48.604	MGP_SPRETEiJ_G0029162	Rbm28	58	54.484	Mus_spretus
ENSMALG00000006419	rbm28	100	49.751	ENSMPUG00000006511	RBM28	58	55.310	Mustela_putorius_furo
ENSMALG00000006419	rbm28	63	52.033	ENSMLUG00000002186	RBM28	57	53.950	Myotis_lucifugus
ENSMALG00000006419	rbm28	100	47.355	ENSNGAG00000017946	-	57	52.941	Nannospalax_galili
ENSMALG00000006419	rbm28	100	48.909	ENSNGAG00000006480	-	59	53.333	Nannospalax_galili
ENSMALG00000006419	rbm28	68	65.000	ENSNLEG00000012307	RBM28	77	65.000	Nomascus_leucogenys
ENSMALG00000006419	rbm28	80	57.407	ENSMEUG00000009611	RBM28	84	57.407	Notamacropus_eugenii
ENSMALG00000006419	rbm28	100	46.442	ENSODEG00000003213	-	57	51.333	Octodon_degus
ENSMALG00000006419	rbm28	71	56.452	ENSODEG00000013217	-	83	54.798	Octodon_degus
ENSMALG00000006419	rbm28	58	75.551	ENSONIG00000014924	rbm28	59	76.211	Oreochromis_niloticus
ENSMALG00000006419	rbm28	100	45.038	ENSOANG00000000815	-	59	47.046	Ornithorhynchus_anatinus
ENSMALG00000006419	rbm28	63	51.829	ENSOCUG00000003009	RBM28	57	55.056	Oryctolagus_cuniculus
ENSMALG00000006419	rbm28	99	63.718	ENSORLG00000009636	rbm28	59	70.222	Oryzias_latipes
ENSMALG00000006419	rbm28	99	64.554	ENSORLG00020002123	rbm28	61	70.222	Oryzias_latipes_hni
ENSMALG00000006419	rbm28	84	71.707	ENSORLG00015015030	rbm28	98	71.707	Oryzias_latipes_hsok
ENSMALG00000006419	rbm28	58	71.965	ENSOMEG00000007801	rbm28	60	71.965	Oryzias_melastigma
ENSMALG00000006419	rbm28	68	62.500	ENSOGAG00000006011	RBM28	76	62.500	Otolemur_garnettii
ENSMALG00000006419	rbm28	100	49.683	ENSOARG00000002547	RBM28	59	53.898	Ovis_aries
ENSMALG00000006419	rbm28	68	65.000	ENSPPAG00000041730	RBM28	77	65.000	Pan_paniscus
ENSMALG00000006419	rbm28	100	49.352	ENSPPRG00000004420	RBM28	79	65.000	Panthera_pardus
ENSMALG00000006419	rbm28	100	49.611	ENSPTIG00000008550	RBM28	79	65.000	Panthera_tigris_altaica
ENSMALG00000006419	rbm28	68	65.000	ENSPTRG00000019659	RBM28	77	65.000	Pan_troglodytes
ENSMALG00000006419	rbm28	69	65.000	ENSPANG00000022295	RBM28	77	65.000	Papio_anubis
ENSMALG00000006419	rbm28	99	53.799	ENSPKIG00000023453	rbm28	62	57.438	Paramormyrops_kingsleyae
ENSMALG00000006419	rbm28	82	65.962	ENSPMGG00000012840	rbm28	95	65.962	Periophthalmus_magnuspinnatus
ENSMALG00000006419	rbm28	100	47.865	ENSPEMG00000020673	Rbm28	60	53.620	Peromyscus_maniculatus_bairdii
ENSMALG00000006419	rbm28	100	48.652	ENSPCIG00000012810	RBM28	59	53.125	Phascolarctos_cinereus
ENSMALG00000006419	rbm28	100	64.387	ENSPFOG00000018209	rbm28	59	70.288	Poecilia_formosa
ENSMALG00000006419	rbm28	57	69.888	ENSPLAG00000016078	rbm28	56	69.888	Poecilia_latipinna
ENSMALG00000006419	rbm28	100	64.000	ENSPMEG00000004292	rbm28	59	70.067	Poecilia_mexicana
ENSMALG00000006419	rbm28	99	63.001	ENSPREG00000014287	rbm28	74	69.575	Poecilia_reticulata
ENSMALG00000006419	rbm28	100	49.686	ENSPPYG00000017975	RBM28	58	54.102	Pongo_abelii
ENSMALG00000006419	rbm28	72	49.859	ENSPCAG00000008223	RBM28	83	49.724	Procavia_capensis
ENSMALG00000006419	rbm28	79	65.000	ENSPCOG00000016797	RBM28	76	65.000	Propithecus_coquereli
ENSMALG00000006419	rbm28	70	60.550	ENSPVAG00000005443	RBM28	67	63.131	Pteropus_vampyrus
ENSMALG00000006419	rbm28	100	68.164	ENSPNYG00000014003	rbm28	59	75.771	Pundamilia_nyererei
ENSMALG00000006419	rbm28	100	47.788	ENSRNOG00000005468	Rbm28	89	51.681	Rattus_norvegicus
ENSMALG00000006419	rbm28	69	65.000	ENSRBIG00000033990	RBM28	77	65.000	Rhinopithecus_bieti
ENSMALG00000006419	rbm28	69	65.000	ENSRROG00000040747	RBM28	77	65.000	Rhinopithecus_roxellana
ENSMALG00000006419	rbm28	86	44.072	ENSSBOG00000012308	RBM28	80	52.066	Saimiri_boliviensis_boliviensis
ENSMALG00000006419	rbm28	96	46.854	ENSSHAG00000017017	RBM28	58	54.206	Sarcophilus_harrisii
ENSMALG00000006419	rbm28	64	67.800	ENSSMAG00000003885	rbm28	90	71.652	Scophthalmus_maximus
ENSMALG00000006419	rbm28	58	80.837	ENSSDUG00000014270	rbm28	88	80.795	Seriola_dumerili
ENSMALG00000006419	rbm28	100	73.393	ENSSLDG00000020099	rbm28	59	79.912	Seriola_lalandi_dorsalis
ENSMALG00000006419	rbm28	72	57.825	ENSSARG00000008303	RBM28	79	57.216	Sorex_araneus
ENSMALG00000006419	rbm28	66	60.294	ENSSPUG00000000838	RBM28	83	54.118	Sphenodon_punctatus
ENSMALG00000006419	rbm28	57	74.775	ENSSPAG00000023305	rbm28	62	75.664	Stegastes_partitus
ENSMALG00000006419	rbm28	100	48.550	ENSSSCG00000031847	RBM28	59	54.343	Sus_scrofa
ENSMALG00000006419	rbm28	100	63.091	ENSTRUG00000013311	rbm28	58	67.249	Takifugu_rubripes
ENSMALG00000006419	rbm28	99	59.924	ENSTNIG00000017962	rbm28	90	69.042	Tetraodon_nigroviridis
ENSMALG00000006419	rbm28	87	58.937	ENSTTRG00000013647	RBM28	86	58.937	Tursiops_truncatus
ENSMALG00000006419	rbm28	100	46.332	ENSUAMG00000006949	RBM28	93	48.889	Ursus_americanus
ENSMALG00000006419	rbm28	100	48.500	ENSUMAG00000005997	RBM28	58	53.725	Ursus_maritimus
ENSMALG00000006419	rbm28	85	44.838	ENSVPAG00000008304	RBM28	80	47.865	Vicugna_pacos
ENSMALG00000006419	rbm28	63	51.619	ENSVVUG00000007270	RBM28	58	53.499	Vulpes_vulpes
ENSMALG00000006419	rbm28	63	48.600	ENSXETG00000009271	rbm28	59	50.976	Xenopus_tropicalis
ENSMALG00000006419	rbm28	57	65.843	ENSXCOG00000020357	rbm28	91	65.843	Xiphophorus_couchianus
ENSMALG00000006419	rbm28	57	70.295	ENSXMAG00000004415	rbm28	58	70.615	Xiphophorus_maculatus