EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMALG00000006797 (Gene tree)
Gene ID
109970130
Gene Symbol
puf60b
Alias
fe37c05|si:ch211-12p8.2|si:zc12p8.2|wu:fb33e11|wu:fe37c05|zgc:86806
Full Name
poly(U)-binding-splicing factor PUF60-like
Gene Type
protein_coding
Species
Monopterus_albus
Status
putative
Strand
Minus strand
Length
8240 bases
Position
chrKV884878.1:758652-766891
Accession
109970130
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMALP00000009577RRM_1PF00076.221.3e-4312
ENSMALP00000009577RRM_1PF00076.221.3e-4322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMALT00000009778-1494XM_020617489ENSMALP00000009577497 (aa)XP_020473145-
Gene Model
Click here to download ENSMALG00000006797's gene model file
Pathways
Pathway IDPathway NameSource
malb03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000006797's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMALG00000006797puf60b5537.000ENSMALG00000009985u2af2a6038.235
ENSMALG00000006797puf60b10075.665ENSMALG00000000200-10075.856
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMALG00000006797puf60b9977.652ENSG00000179950PUF6010078.311Homo_sapiens
ENSMALG00000006797puf60b10090.684ENSAPOG00000001713puf60b10090.684Acanthochromis_polyacanthus
ENSMALG00000006797puf60b9978.585ENSAMEG00000006406PUF609478.776Ailuropoda_melanoleuca
ENSMALG00000006797puf60b9770.817ENSACIG00000003263-9971.705Amphilophus_citrinellus
ENSMALG00000006797puf60b9790.253ENSACIG00000021705puf60b10090.253Amphilophus_citrinellus
ENSMALG00000006797puf60b10075.332ENSAOCG00000015558-10075.901Amphiprion_ocellaris
ENSMALG00000006797puf60b10090.684ENSAOCG00000005395puf60b10091.228Amphiprion_ocellaris
ENSMALG00000006797puf60b9767.054ENSAPEG00000001836-9967.954Amphiprion_percula
ENSMALG00000006797puf60b10087.549ENSAPEG00000011923puf60b10087.549Amphiprion_percula
ENSMALG00000006797puf60b10075.142ENSATEG00000006303-10075.475Anabas_testudineus
ENSMALG00000006797puf60b10091.445ENSATEG00000001730puf60b10091.445Anabas_testudineus
ENSMALG00000006797puf60b9978.558ENSAPLG00000010150PUF6010078.558Anas_platyrhynchos
ENSMALG00000006797puf60b9877.652ENSACAG00000001645PUF609777.652Anolis_carolinensis
ENSMALG00000006797puf60b9977.462ENSANAG00000018626PUF6010078.119Aotus_nancymaae
ENSMALG00000006797puf60b9790.253ENSACLG00000004462puf60b10090.253Astatotilapia_calliptera
ENSMALG00000006797puf60b9773.410ENSAMXG00000041030puf60b10074.566Astyanax_mexicanus
ENSMALG00000006797puf60b9879.434ENSAMXG00000036570puf60a10076.838Astyanax_mexicanus
ENSMALG00000006797puf60b9977.652ENSBTAG00000037493PUF609977.505Bos_taurus
ENSMALG00000006797puf60b7747.744WBGene00004389rnp-67549.624Caenorhabditis_elegans
ENSMALG00000006797puf60b9977.652ENSCJAG00000021485PUF609877.609Callithrix_jacchus
ENSMALG00000006797puf60b9977.462ENSCAFG00000001400PUF609377.462Canis_familiaris
ENSMALG00000006797puf60b9977.841ENSCAFG00020018754PUF609877.799Canis_lupus_dingo
ENSMALG00000006797puf60b9977.652ENSCHIG00000001618PUF608777.652Capra_hircus
ENSMALG00000006797puf60b9978.030ENSTSYG00000011912PUF6010078.503Carlito_syrichta
ENSMALG00000006797puf60b9973.308ENSCPOG00000014613PUF609473.120Cavia_porcellus
ENSMALG00000006797puf60b9978.927ENSCCAG00000007744PUF609878.887Cebus_capucinus
ENSMALG00000006797puf60b9977.652ENSCATG00000035405PUF609877.609Cercocebus_atys
ENSMALG00000006797puf60b9978.030ENSCLAG00000009154PUF609378.030Chinchilla_lanigera
ENSMALG00000006797puf60b9778.311ENSCSAG00000008878PUF6010078.311Chlorocebus_sabaeus
ENSMALG00000006797puf60b9877.905ENSCPBG00000005595PUF609878.178Chrysemys_picta_bellii
ENSMALG00000006797puf60b9848.509ENSCING00000008436-9848.509Ciona_intestinalis
ENSMALG00000006797puf60b9548.408ENSCSAVG00000004765-9748.832Ciona_savignyi
ENSMALG00000006797puf60b9548.855ENSCSAVG00000001385-9949.237Ciona_savignyi
ENSMALG00000006797puf60b7776.066ENSCANG00000041843PUF6010076.066Colobus_angolensis_palliatus
ENSMALG00000006797puf60b9978.220ENSCGRG00001017442Puf609378.220Cricetulus_griseus_chok1gshd
ENSMALG00000006797puf60b9978.220ENSCGRG00000003717Puf609378.220Cricetulus_griseus_crigri
ENSMALG00000006797puf60b9990.095ENSCSEG00000019887puf60b9490.095Cynoglossus_semilaevis
ENSMALG00000006797puf60b5179.216ENSCSEG00000014845-9071.947Cynoglossus_semilaevis
ENSMALG00000006797puf60b9789.279ENSCVAG00000009386puf60b10089.279Cyprinodon_variegatus
ENSMALG00000006797puf60b8874.145ENSCVAG00000001560-9874.518Cyprinodon_variegatus
ENSMALG00000006797puf60b9773.814ENSDARG00000001241puf60b9997.619Danio_rerio
ENSMALG00000006797puf60b9779.576ENSDARG00000032175puf60a9993.191Danio_rerio
ENSMALG00000006797puf60b9663.372ENSDNOG00000043278PUF609163.372Dasypus_novemcinctus
ENSMALG00000006797puf60b9978.220ENSDORG00000004585Puf609578.220Dipodomys_ordii
ENSMALG00000006797puf60b7863.136FBgn0028577hfp9945.826Drosophila_melanogaster
ENSMALG00000006797puf60b9562.823ENSEBUG00000005470-9261.524Eptatretus_burgeri
ENSMALG00000006797puf60b9755.348ENSEBUG00000014291puf60b8455.857Eptatretus_burgeri
ENSMALG00000006797puf60b9977.841ENSEASG00005009695PUF609877.799Equus_asinus_asinus
ENSMALG00000006797puf60b9977.841ENSECAG00000024681PUF609777.799Equus_caballus
ENSMALG00000006797puf60b9981.544ENSELUG00000006507puf60b10081.329Esox_lucius
ENSMALG00000006797puf60b10080.755ENSELUG00000018443-10080.755Esox_lucius
ENSMALG00000006797puf60b9977.652ENSFCAG00000001045PUF6010078.311Felis_catus
ENSMALG00000006797puf60b9969.070ENSFALG00000001136PUF609869.450Ficedula_albicollis
ENSMALG00000006797puf60b9978.030ENSFDAG00000017177PUF609378.030Fukomys_damarensis
ENSMALG00000006797puf60b9375.356ENSFHEG00000021687PUF6010076.299Fundulus_heteroclitus
ENSMALG00000006797puf60b10089.544ENSFHEG00000020046puf60b10090.058Fundulus_heteroclitus
ENSMALG00000006797puf60b9975.573ENSGMOG00000006392puf60b10075.191Gadus_morhua
ENSMALG00000006797puf60b6278.655ENSGALG00000039901PUF609478.655Gallus_gallus
ENSMALG00000006797puf60b10089.354ENSGAFG00000021040puf60b10089.864Gambusia_affinis
ENSMALG00000006797puf60b9773.398ENSGAFG00000004334-9973.663Gambusia_affinis
ENSMALG00000006797puf60b9977.264ENSGACG00000004717puf60b9877.264Gasterosteus_aculeatus
ENSMALG00000006797puf60b9866.925ENSGACG00000001484-10066.992Gasterosteus_aculeatus
ENSMALG00000006797puf60b9877.905ENSGAGG00000013289PUF609278.178Gopherus_agassizii
ENSMALG00000006797puf60b9977.652ENSGGOG00000004646PUF609877.609Gorilla_gorilla
ENSMALG00000006797puf60b10075.712ENSHBUG00000009634-9976.346Haplochromis_burtoni
ENSMALG00000006797puf60b10089.734ENSHBUG00000015118puf60b10090.253Haplochromis_burtoni
ENSMALG00000006797puf60b9978.030ENSHGLG00000006111PUF609378.030Heterocephalus_glaber_female
ENSMALG00000006797puf60b9978.030ENSHGLG00100012362PUF609378.030Heterocephalus_glaber_male
ENSMALG00000006797puf60b9888.202ENSHCOG00000015541puf60b10088.202Hippocampus_comes
ENSMALG00000006797puf60b9664.859ENSHCOG00000000378-9963.584Hippocampus_comes
ENSMALG00000006797puf60b9774.053ENSIPUG00000004660puf60b9974.053Ictalurus_punctatus
ENSMALG00000006797puf60b10075.849ENSIPUG00000002453puf60a9978.776Ictalurus_punctatus
ENSMALG00000006797puf60b9978.030ENSSTOG00000025037PUF609478.030Ictidomys_tridecemlineatus
ENSMALG00000006797puf60b9978.220ENSJJAG00000001076Puf609378.220Jaculus_jaculus
ENSMALG00000006797puf60b9770.992ENSKMAG00000010106-10072.832Kryptolebias_marmoratus
ENSMALG00000006797puf60b9789.864ENSKMAG00000016745puf60b10089.864Kryptolebias_marmoratus
ENSMALG00000006797puf60b9992.208ENSLBEG00000012505puf60b10092.208Labrus_bergylta
ENSMALG00000006797puf60b6669.565ENSLACG00000005456PUF609970.109Latimeria_chalumnae
ENSMALG00000006797puf60b10080.871ENSLOCG00000010106puf60b10081.250Lepisosteus_oculatus
ENSMALG00000006797puf60b9977.186ENSLAFG00000022929PUF609477.083Loxodonta_africana
ENSMALG00000006797puf60b9977.652ENSMFAG00000043373PUF609977.111Macaca_fascicularis
ENSMALG00000006797puf60b9977.652ENSMMUG00000013558PUF609877.609Macaca_mulatta
ENSMALG00000006797puf60b9977.652ENSMNEG00000031099PUF609877.609Macaca_nemestrina
ENSMALG00000006797puf60b9778.311ENSMLEG00000040009PUF6010078.311Mandrillus_leucophaeus
ENSMALG00000006797puf60b9976.392ENSMAMG00000019476-10075.901Mastacembelus_armatus
ENSMALG00000006797puf60b9990.173ENSMAMG00000010394puf60b10089.753Mastacembelus_armatus
ENSMALG00000006797puf60b10075.712ENSMZEG00005019425-10075.712Maylandia_zebra
ENSMALG00000006797puf60b9790.253ENSMZEG00005018515puf60b10090.253Maylandia_zebra
ENSMALG00000006797puf60b9978.558ENSMGAG00000013070PUF609878.558Meleagris_gallopavo
ENSMALG00000006797puf60b6678.474ENSMAUG00000014267-9078.474Mesocricetus_auratus
ENSMALG00000006797puf60b9364.185ENSMAUG00000018549-9564.185Mesocricetus_auratus
ENSMALG00000006797puf60b9977.841ENSMICG00000012226PUF609977.799Microcebus_murinus
ENSMALG00000006797puf60b9978.220ENSMOCG00000018780Puf609478.220Microtus_ochrogaster
ENSMALG00000006797puf60b9791.033ENSMMOG00000004217puf60b10091.033Mola_mola
ENSMALG00000006797puf60b10066.983ENSMMOG00000018059-9970.901Mola_mola
ENSMALG00000006797puf60b9977.652ENSMODG00000009161PUF609577.652Monodelphis_domestica
ENSMALG00000006797puf60b9978.598MGP_CAROLIEiJ_G0019910Puf609378.598Mus_caroli
ENSMALG00000006797puf60b9978.598ENSMUSG00000002524Puf609378.598Mus_musculus
ENSMALG00000006797puf60b9978.598MGP_PahariEiJ_G0019920Puf609378.598Mus_pahari
ENSMALG00000006797puf60b9978.598MGP_SPRETEiJ_G0020812Puf609378.598Mus_spretus
ENSMALG00000006797puf60b9977.841ENSMPUG00000008137PUF609377.841Mustela_putorius_furo
ENSMALG00000006797puf60b9971.727ENSMLUG00000013032-9871.727Myotis_lucifugus
ENSMALG00000006797puf60b9977.462ENSMLUG00000000238-9477.462Myotis_lucifugus
ENSMALG00000006797puf60b9978.220ENSNGAG00000000712Puf6010078.887Nannospalax_galili
ENSMALG00000006797puf60b8187.191ENSNBRG00000013047puf60b9787.290Neolamprologus_brichardi
ENSMALG00000006797puf60b10075.901ENSNBRG00000017223-9976.538Neolamprologus_brichardi
ENSMALG00000006797puf60b9977.652ENSNLEG00000002156PUF609877.609Nomascus_leucogenys
ENSMALG00000006797puf60b6994.378ENSOPRG00000002147PUF606894.378Ochotona_princeps
ENSMALG00000006797puf60b9560.852ENSODEG00000015513-9660.437Octodon_degus
ENSMALG00000006797puf60b6984.375ENSODEG00000014024-9084.375Octodon_degus
ENSMALG00000006797puf60b9976.054ENSONIG00000014030-9976.054Oreochromis_niloticus
ENSMALG00000006797puf60b9990.403ENSONIG00000006247puf60b9990.403Oreochromis_niloticus
ENSMALG00000006797puf60b9674.530ENSOANG00000006962PUF609974.530Ornithorhynchus_anatinus
ENSMALG00000006797puf60b9775.048ENSORLG00000028655-9975.769Oryzias_latipes
ENSMALG00000006797puf60b10088.593ENSORLG00000012279puf60b10089.084Oryzias_latipes
ENSMALG00000006797puf60b10088.593ENSORLG00020007333puf6010089.084Oryzias_latipes_hni
ENSMALG00000006797puf60b9875.670ENSORLG00020018144-9975.614Oryzias_latipes_hni
ENSMALG00000006797puf60b9875.624ENSORLG00015016833-9876.200Oryzias_latipes_hsok
ENSMALG00000006797puf60b10087.879ENSORLG00015007718puf60b10088.738Oryzias_latipes_hsok
ENSMALG00000006797puf60b10087.407ENSOMEG00000001643puf60b10087.407Oryzias_melastigma
ENSMALG00000006797puf60b9975.096ENSOMEG00000022185-9875.145Oryzias_melastigma
ENSMALG00000006797puf60b9978.030ENSOGAG00000006259PUF609478.030Otolemur_garnettii
ENSMALG00000006797puf60b9977.586ENSOARG00000016235PUF609977.586Ovis_aries
ENSMALG00000006797puf60b9977.652ENSPPAG00000029933PUF609877.609Pan_paniscus
ENSMALG00000006797puf60b9977.652ENSPPRG00000003257PUF6010078.311Panthera_pardus
ENSMALG00000006797puf60b9975.522ENSPTIG00000009795PUF609975.522Panthera_tigris_altaica
ENSMALG00000006797puf60b9977.652ENSPTRG00000020670PUF609877.609Pan_troglodytes
ENSMALG00000006797puf60b9977.652ENSPTRG00000043963-9877.609Pan_troglodytes
ENSMALG00000006797puf60b9977.652ENSPANG00000021936PUF609877.609Papio_anubis
ENSMALG00000006797puf60b10081.749ENSPKIG00000012204puf60b10083.041Paramormyrops_kingsleyae
ENSMALG00000006797puf60b10081.509ENSPKIG00000004295puf60a10081.509Paramormyrops_kingsleyae
ENSMALG00000006797puf60b9977.778ENSPSIG00000004679PUF609977.778Pelodiscus_sinensis
ENSMALG00000006797puf60b10085.607ENSPMGG00000013444puf60b10087.259Periophthalmus_magnuspinnatus
ENSMALG00000006797puf60b9978.220ENSPEMG00000008820Puf609378.220Peromyscus_maniculatus_bairdii
ENSMALG00000006797puf60b9978.030ENSPCIG00000020270PUF609978.095Phascolarctos_cinereus
ENSMALG00000006797puf60b10089.544ENSPFOG00000019217puf60b9986.756Poecilia_formosa
ENSMALG00000006797puf60b10074.242ENSPFOG00000011118-10074.383Poecilia_formosa
ENSMALG00000006797puf60b9790.058ENSPLAG00000010754puf60b10090.058Poecilia_latipinna
ENSMALG00000006797puf60b10074.242ENSPLAG00000017025-9274.383Poecilia_latipinna
ENSMALG00000006797puf60b10089.544ENSPMEG00000000838puf60b10090.058Poecilia_mexicana
ENSMALG00000006797puf60b10074.053ENSPMEG00000009767-9274.573Poecilia_mexicana
ENSMALG00000006797puf60b10088.889ENSPREG00000005440puf60b10088.889Poecilia_reticulata
ENSMALG00000006797puf60b7774.408ENSPPYG00000018951-9574.408Pongo_abelii
ENSMALG00000006797puf60b7776.066ENSPCAG00000014837PUF6010076.066Procavia_capensis
ENSMALG00000006797puf60b9977.652ENSPCOG00000027981PUF6010077.213Propithecus_coquereli
ENSMALG00000006797puf60b9496.835ENSPVAG00000016167PUF607496.835Pteropus_vampyrus
ENSMALG00000006797puf60b10075.712ENSPNYG00000004273-10075.712Pundamilia_nyererei
ENSMALG00000006797puf60b9790.253ENSPNYG00000002556puf60b10090.253Pundamilia_nyererei
ENSMALG00000006797puf60b9871.961ENSPNAG00000019415puf60b9072.745Pygocentrus_nattereri
ENSMALG00000006797puf60b9877.351ENSPNAG00000019909puf60a9977.586Pygocentrus_nattereri
ENSMALG00000006797puf60b9978.598ENSRNOG00000009960Puf609378.598Rattus_norvegicus
ENSMALG00000006797puf60b9977.652ENSRBIG00000035274PUF609877.609Rhinopithecus_bieti
ENSMALG00000006797puf60b9977.652ENSRROG00000029360PUF609977.609Rhinopithecus_roxellana
ENSMALG00000006797puf60b9978.503ENSSBOG00000027089PUF609878.462Saimiri_boliviensis_boliviensis
ENSMALG00000006797puf60b8876.471ENSSHAG00000006668PUF609076.471Sarcophilus_harrisii
ENSMALG00000006797puf60b10076.854ENSSFOG00015019371puf60a9882.281Scleropages_formosus
ENSMALG00000006797puf60b9775.530ENSSFOG00015019619puf60b9977.846Scleropages_formosus
ENSMALG00000006797puf60b73100.000ENSSMAG00000016381puf60b71100.000Scophthalmus_maximus
ENSMALG00000006797puf60b9990.807ENSSDUG00000009935puf60b9990.807Seriola_dumerili
ENSMALG00000006797puf60b9775.342ENSSDUG00000007048-9776.125Seriola_dumerili
ENSMALG00000006797puf60b10090.926ENSSLDG00000024011puf60b10091.271Seriola_lalandi_dorsalis
ENSMALG00000006797puf60b10071.612ENSSLDG00000007366-9974.664Seriola_lalandi_dorsalis
ENSMALG00000006797puf60b6167.257ENSSPUG00000013518PUF609267.257Sphenodon_punctatus
ENSMALG00000006797puf60b9776.163ENSSPAG00000020285-10076.744Stegastes_partitus
ENSMALG00000006797puf60b10090.741ENSSPAG00000012144puf60b10091.271Stegastes_partitus
ENSMALG00000006797puf60b9977.652ENSSSCG00000038800PUF609874.573Sus_scrofa
ENSMALG00000006797puf60b9975.758ENSTGUG00000012797-10075.758Taeniopygia_guttata
ENSMALG00000006797puf60b9772.374ENSTRUG00000008843-10072.320Takifugu_rubripes
ENSMALG00000006797puf60b10088.593ENSTRUG00000005420puf60b10088.615Takifugu_rubripes
ENSMALG00000006797puf60b9973.077ENSTNIG00000003069-10073.218Tetraodon_nigroviridis
ENSMALG00000006797puf60b9989.038ENSTNIG00000013675puf60b10089.038Tetraodon_nigroviridis
ENSMALG00000006797puf60b5172.509ENSTBEG00000002751-9772.509Tupaia_belangeri
ENSMALG00000006797puf60b7359.302ENSTBEG00000001899-10061.337Tupaia_belangeri
ENSMALG00000006797puf60b9778.269ENSTTRG00000017088PUF6010078.269Tursiops_truncatus
ENSMALG00000006797puf60b9977.841ENSUAMG00000024917PUF609877.799Ursus_americanus
ENSMALG00000006797puf60b9974.286ENSUMAG00000000272PUF609474.286Ursus_maritimus
ENSMALG00000006797puf60b9977.841ENSVVUG00000022527PUF6010078.503Vulpes_vulpes
ENSMALG00000006797puf60b9876.000ENSXETG00000012469puf609876.381Xenopus_tropicalis
ENSMALG00000006797puf60b9786.745ENSXCOG00000012355puf60b10086.745Xiphophorus_couchianus
ENSMALG00000006797puf60b9971.648ENSXMAG00000010507-9971.785Xiphophorus_maculatus
ENSMALG00000006797puf60b10089.544ENSXMAG00000001862puf60b10090.058Xiphophorus_maculatus

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