EuRBPDB

Description

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000009572	zf-C2H2	PF00096.26	7.7e-20	1	3
ENSMALP00000009572	zf-C2H2	PF00096.26	7.7e-20	2	3
ENSMALP00000009572	zf-C2H2	PF00096.26	7.7e-20	3	3
ENSMALP00000009567	zf-C2H2	PF00096.26	1.1e-18	1	3
ENSMALP00000009567	zf-C2H2	PF00096.26	1.1e-18	2	3
ENSMALP00000009567	zf-C2H2	PF00096.26	1.1e-18	3	3
ENSMALP00000009572	zf-met	PF12874.7	3.6e-11	1	1
ENSMALP00000009567	zf-met	PF12874.7	4.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000009768	-	3957	XM_020608376	ENSMALP00000009567	786 (aa)	XP_020464032	-
ENSMALT00000009773	-	3969	-	ENSMALP00000009572	637 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000006800	-	53	35.455	ENSMALG00000003975	-	98	35.455
ENSMALG00000006800	-	50	32.632	ENSMALG00000012721	-	79	31.000
ENSMALG00000006800	-	53	30.645	ENSMALG00000003588	znf236	58	32.353
ENSMALG00000006800	-	53	35.455	ENSMALG00000021985	-	83	35.455
ENSMALG00000006800	-	50	36.842	ENSMALG00000007051	-	91	36.842
ENSMALG00000006800	-	50	36.364	ENSMALG00000012155	-	95	32.203
ENSMALG00000006800	-	51	31.013	ENSMALG00000012008	-	80	31.013
ENSMALG00000006800	-	55	33.333	ENSMALG00000008930	-	86	33.333
ENSMALG00000006800	-	52	30.503	ENSMALG00000001487	-	82	30.503
ENSMALG00000006800	-	51	38.824	ENSMALG00000014761	-	65	32.759
ENSMALG00000006800	-	55	31.481	ENSMALG00000013934	prdm5	73	31.776
ENSMALG00000006800	-	52	31.073	ENSMALG00000020889	-	66	31.073
ENSMALG00000006800	-	51	30.208	ENSMALG00000005554	-	88	30.208
ENSMALG00000006800	-	51	31.884	ENSMALG00000011756	-	62	31.884
ENSMALG00000006800	-	59	32.117	ENSMALG00000000494	-	66	32.117
ENSMALG00000006800	-	50	32.948	ENSMALG00000014911	-	79	32.948
ENSMALG00000006800	-	65	30.294	ENSMALG00000001085	-	90	30.769
ENSMALG00000006800	-	51	31.852	ENSMALG00000006454	zbtb47b	86	31.776
ENSMALG00000006800	-	50	32.479	ENSMALG00000010693	-	58	32.759
ENSMALG00000006800	-	51	32.000	ENSMALG00000005203	-	92	37.333
ENSMALG00000006800	-	54	34.211	ENSMALG00000012043	-	95	32.500
ENSMALG00000006800	-	50	30.588	ENSMALG00000005239	-	89	31.348
ENSMALG00000006800	-	57	33.168	ENSMALG00000008786	-	86	33.005
ENSMALG00000006800	-	54	31.073	ENSMALG00000012129	-	72	31.073
ENSMALG00000006800	-	52	31.429	ENSMALG00000004579	-	89	34.375
ENSMALG00000006800	-	50	30.222	ENSMALG00000015655	-	97	32.530

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000006800	-	78	42.122	ENSPNAG00000024689	wu:fe05a04	72	49.769	Pygocentrus_nattereri
ENSMALG00000006800	-	89	59.235	ENSXMAG00000010621	-	93	57.041	Xiphophorus_maculatus