EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000007061 (Gene tree)
Gene ID: 109957813
Gene Symbol: exosc1
Alias: -
Full Name: exosome component 1
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 3180 bases
Position: chrKV884717.1:5105983-5109162
Accession: 109957813
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000009938	EXOSC1	PF10447.9	1.7e-15	1	1
ENSMALP00000009938	ECR1_N	PF14382.6	3.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000010147	-	1167	XM_020595981	ENSMALP00000009938	199 (aa)	XP_020451637	UPI0009B30304

Gene Model

Click here to download ENSMALG00000007061's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000007061's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000007061	exosc1	92	80.978	ENSG00000171311	EXOSC1	94	80.978	Homo_sapiens
ENSMALG00000007061	exosc1	93	98.378	ENSAPOG00000007822	exosc1	95	98.378	Acanthochromis_polyacanthus
ENSMALG00000007061	exosc1	92	81.522	ENSAMEG00000000129	EXOSC1	94	81.522	Ailuropoda_melanoleuca
ENSMALG00000007061	exosc1	93	96.216	ENSACIG00000018956	exosc1	91	96.216	Amphilophus_citrinellus
ENSMALG00000007061	exosc1	93	97.838	ENSAOCG00000010699	exosc1	95	97.838	Amphiprion_ocellaris
ENSMALG00000007061	exosc1	90	86.111	ENSAPEG00000012690	exosc1	97	86.111	Amphiprion_percula
ENSMALG00000007061	exosc1	93	97.297	ENSATEG00000018683	exosc1	95	97.297	Anabas_testudineus
ENSMALG00000007061	exosc1	92	78.261	ENSACAG00000002101	EXOSC1	94	78.261	Anolis_carolinensis
ENSMALG00000007061	exosc1	92	80.978	ENSANAG00000034669	EXOSC1	94	80.978	Aotus_nancymaae
ENSMALG00000007061	exosc1	93	96.757	ENSACLG00000021243	exosc1	95	96.757	Astatotilapia_calliptera
ENSMALG00000007061	exosc1	93	94.054	ENSAMXG00000011116	exosc1	95	94.054	Astyanax_mexicanus
ENSMALG00000007061	exosc1	92	81.522	ENSBTAG00000012699	EXOSC1	94	81.522	Bos_taurus
ENSMALG00000007061	exosc1	89	35.829	WBGene00012966	exos-1	90	35.829	Caenorhabditis_elegans
ENSMALG00000007061	exosc1	92	80.435	ENSCJAG00000016586	EXOSC1	94	80.435	Callithrix_jacchus
ENSMALG00000007061	exosc1	92	80.978	ENSCAFG00000009068	EXOSC1	89	80.978	Canis_familiaris
ENSMALG00000007061	exosc1	92	80.978	ENSCAFG00020006002	EXOSC1	89	80.978	Canis_lupus_dingo
ENSMALG00000007061	exosc1	92	81.522	ENSCHIG00000015253	EXOSC1	94	81.522	Capra_hircus
ENSMALG00000007061	exosc1	92	79.891	ENSTSYG00000000760	EXOSC1	94	79.891	Carlito_syrichta
ENSMALG00000007061	exosc1	92	80.978	ENSCPOG00000001173	EXOSC1	94	80.978	Cavia_porcellus
ENSMALG00000007061	exosc1	93	41.176	ENSCCAG00000023986	EXOSC1	94	41.176	Cebus_capucinus
ENSMALG00000007061	exosc1	92	80.978	ENSCATG00000034114	EXOSC1	94	80.978	Cercocebus_atys
ENSMALG00000007061	exosc1	92	80.978	ENSCLAG00000002463	EXOSC1	94	80.978	Chinchilla_lanigera
ENSMALG00000007061	exosc1	92	80.435	ENSCSAG00000005870	EXOSC1	94	80.435	Chlorocebus_sabaeus
ENSMALG00000007061	exosc1	89	67.232	ENSCHOG00000006477	EXOSC1	95	67.232	Choloepus_hoffmanni
ENSMALG00000007061	exosc1	53	67.925	ENSCPBG00000011949	EXOSC1	88	67.925	Chrysemys_picta_bellii
ENSMALG00000007061	exosc1	92	51.630	ENSCING00000022734	-	88	51.630	Ciona_intestinalis
ENSMALG00000007061	exosc1	92	55.435	ENSCSAVG00000010865	-	94	55.435	Ciona_savignyi
ENSMALG00000007061	exosc1	92	80.978	ENSCANG00000034159	EXOSC1	94	80.978	Colobus_angolensis_palliatus
ENSMALG00000007061	exosc1	92	79.891	ENSCGRG00001000335	Exosc1	94	79.891	Cricetulus_griseus_chok1gshd
ENSMALG00000007061	exosc1	92	79.891	ENSCGRG00000011602	Exosc1	94	79.891	Cricetulus_griseus_crigri
ENSMALG00000007061	exosc1	93	81.622	ENSCSEG00000007895	exosc1	91	81.622	Cynoglossus_semilaevis
ENSMALG00000007061	exosc1	93	89.189	ENSCVAG00000016748	exosc1	95	89.189	Cyprinodon_variegatus
ENSMALG00000007061	exosc1	93	94.595	ENSDARG00000059841	exosc1	95	94.595	Danio_rerio
ENSMALG00000007061	exosc1	69	78.832	ENSDNOG00000007983	EXOSC1	93	78.832	Dasypus_novemcinctus
ENSMALG00000007061	exosc1	92	80.435	ENSDORG00000016528	Exosc1	94	80.435	Dipodomys_ordii
ENSMALG00000007061	exosc1	91	47.312	FBgn0032346	Csl4	90	47.312	Drosophila_melanogaster
ENSMALG00000007061	exosc1	92	78.804	ENSETEG00000002469	-	94	78.804	Echinops_telfairi
ENSMALG00000007061	exosc1	92	65.775	ENSEBUG00000008164	exosc1	94	65.775	Eptatretus_burgeri
ENSMALG00000007061	exosc1	92	71.196	ENSEASG00005008684	EXOSC1	94	71.196	Equus_asinus_asinus
ENSMALG00000007061	exosc1	55	55.963	ENSECAG00000010621	EXOSC1	65	55.963	Equus_caballus
ENSMALG00000007061	exosc1	92	79.891	ENSEEUG00000005647	EXOSC1	94	79.891	Erinaceus_europaeus
ENSMALG00000007061	exosc1	99	88.384	ENSELUG00000017369	exosc1	88	88.384	Esox_lucius
ENSMALG00000007061	exosc1	92	81.522	ENSFCAG00000040563	EXOSC1	89	81.522	Felis_catus
ENSMALG00000007061	exosc1	92	78.804	ENSFALG00000008450	EXOSC1	94	78.804	Ficedula_albicollis
ENSMALG00000007061	exosc1	92	80.978	ENSFDAG00000000846	EXOSC1	94	80.978	Fukomys_damarensis
ENSMALG00000007061	exosc1	93	90.270	ENSFHEG00000009154	exosc1	95	90.270	Fundulus_heteroclitus
ENSMALG00000007061	exosc1	93	94.054	ENSGMOG00000008993	exosc1	95	94.054	Gadus_morhua
ENSMALG00000007061	exosc1	92	65.761	ENSGALG00000039917	EXOSC1	99	84.138	Gallus_gallus
ENSMALG00000007061	exosc1	93	90.270	ENSGAFG00000010265	exosc1	91	90.270	Gambusia_affinis
ENSMALG00000007061	exosc1	93	92.973	ENSGACG00000018936	exosc1	95	92.973	Gasterosteus_aculeatus
ENSMALG00000007061	exosc1	92	78.261	ENSGAGG00000019192	EXOSC1	94	78.261	Gopherus_agassizii
ENSMALG00000007061	exosc1	92	69.565	ENSGGOG00000003099	EXOSC1	94	69.565	Gorilla_gorilla
ENSMALG00000007061	exosc1	93	96.757	ENSHBUG00000017857	exosc1	96	96.757	Haplochromis_burtoni
ENSMALG00000007061	exosc1	92	80.435	ENSHGLG00000016927	EXOSC1	94	80.435	Heterocephalus_glaber_female
ENSMALG00000007061	exosc1	92	80.435	ENSHGLG00100012208	EXOSC1	94	80.435	Heterocephalus_glaber_male
ENSMALG00000007061	exosc1	93	94.595	ENSHCOG00000019882	exosc1	95	94.595	Hippocampus_comes
ENSMALG00000007061	exosc1	93	92.432	ENSIPUG00000007685	exosc1	95	92.432	Ictalurus_punctatus
ENSMALG00000007061	exosc1	92	80.435	ENSSTOG00000006615	EXOSC1	94	80.435	Ictidomys_tridecemlineatus
ENSMALG00000007061	exosc1	54	67.290	ENSSTOG00000029860	-	81	67.290	Ictidomys_tridecemlineatus
ENSMALG00000007061	exosc1	92	80.978	ENSJJAG00000013311	Exosc1	94	80.978	Jaculus_jaculus
ENSMALG00000007061	exosc1	93	93.514	ENSKMAG00000001202	exosc1	78	93.514	Kryptolebias_marmoratus
ENSMALG00000007061	exosc1	93	96.757	ENSLBEG00000011448	exosc1	95	96.757	Labrus_bergylta
ENSMALG00000007061	exosc1	93	65.445	ENSLOCG00000003776	exosc1	94	65.445	Lepisosteus_oculatus
ENSMALG00000007061	exosc1	92	80.435	ENSLAFG00000015983	EXOSC1	94	80.435	Loxodonta_africana
ENSMALG00000007061	exosc1	92	80.978	ENSMFAG00000001493	EXOSC1	94	80.978	Macaca_fascicularis
ENSMALG00000007061	exosc1	92	80.978	ENSMMUG00000020028	EXOSC1	87	80.978	Macaca_mulatta
ENSMALG00000007061	exosc1	92	80.978	ENSMNEG00000029816	EXOSC1	94	80.978	Macaca_nemestrina
ENSMALG00000007061	exosc1	92	75.000	ENSMLEG00000027643	EXOSC1	94	75.000	Mandrillus_leucophaeus
ENSMALG00000007061	exosc1	93	97.297	ENSMAMG00000012200	exosc1	95	97.297	Mastacembelus_armatus
ENSMALG00000007061	exosc1	93	96.757	ENSMZEG00005007042	exosc1	95	96.757	Maylandia_zebra
ENSMALG00000007061	exosc1	92	69.565	ENSMAUG00000020462	-	94	69.565	Mesocricetus_auratus
ENSMALG00000007061	exosc1	92	80.978	ENSMICG00000007664	EXOSC1	87	80.978	Microcebus_murinus
ENSMALG00000007061	exosc1	92	75.410	ENSMOCG00000017124	-	93	75.410	Microtus_ochrogaster
ENSMALG00000007061	exosc1	92	79.891	ENSMOCG00000006004	-	94	79.891	Microtus_ochrogaster
ENSMALG00000007061	exosc1	97	72.021	ENSMMOG00000021403	exosc1	97	72.021	Mola_mola
ENSMALG00000007061	exosc1	92	81.081	ENSMODG00000004213	EXOSC1	94	81.081	Monodelphis_domestica
ENSMALG00000007061	exosc1	92	79.348	MGP_CAROLIEiJ_G0022959	Exosc1	94	79.348	Mus_caroli
ENSMALG00000007061	exosc1	92	79.348	ENSMUSG00000034321	Exosc1	94	79.348	Mus_musculus
ENSMALG00000007061	exosc1	92	79.891	MGP_PahariEiJ_G0014449	Exosc1	94	79.891	Mus_pahari
ENSMALG00000007061	exosc1	92	79.348	MGP_SPRETEiJ_G0023880	Exosc1	94	79.348	Mus_spretus
ENSMALG00000007061	exosc1	92	81.522	ENSMPUG00000017044	EXOSC1	94	81.522	Mustela_putorius_furo
ENSMALG00000007061	exosc1	92	80.978	ENSMLUG00000009228	EXOSC1	94	80.978	Myotis_lucifugus
ENSMALG00000007061	exosc1	92	78.261	ENSNGAG00000022033	Exosc1	94	78.261	Nannospalax_galili
ENSMALG00000007061	exosc1	93	74.595	ENSNBRG00000024007	exosc1	94	74.595	Neolamprologus_brichardi
ENSMALG00000007061	exosc1	92	80.435	ENSNLEG00000013872	EXOSC1	94	80.435	Nomascus_leucogenys
ENSMALG00000007061	exosc1	57	69.298	ENSMEUG00000002246	EXOSC1	97	69.298	Notamacropus_eugenii
ENSMALG00000007061	exosc1	92	80.435	ENSOPRG00000005065	EXOSC1	94	80.435	Ochotona_princeps
ENSMALG00000007061	exosc1	92	80.978	ENSODEG00000016709	EXOSC1	94	80.978	Octodon_degus
ENSMALG00000007061	exosc1	93	97.297	ENSONIG00000017683	exosc1	95	97.297	Oreochromis_niloticus
ENSMALG00000007061	exosc1	57	90.351	ENSOANG00000006563	EXOSC1	98	86.992	Ornithorhynchus_anatinus
ENSMALG00000007061	exosc1	92	79.459	ENSOCUG00000011898	-	94	79.459	Oryctolagus_cuniculus
ENSMALG00000007061	exosc1	93	74.595	ENSOCUG00000026461	-	95	74.595	Oryctolagus_cuniculus
ENSMALG00000007061	exosc1	93	90.860	ENSORLG00000011595	exosc1	95	90.860	Oryzias_latipes
ENSMALG00000007061	exosc1	93	90.860	ENSORLG00020005831	exosc1	95	90.860	Oryzias_latipes_hni
ENSMALG00000007061	exosc1	93	90.323	ENSORLG00015004317	exosc1	95	90.323	Oryzias_latipes_hsok
ENSMALG00000007061	exosc1	93	76.757	ENSOMEG00000013907	exosc1	94	76.757	Oryzias_melastigma
ENSMALG00000007061	exosc1	92	80.435	ENSOGAG00000016259	EXOSC1	94	80.435	Otolemur_garnettii
ENSMALG00000007061	exosc1	92	80.978	ENSOARG00000010136	EXOSC1	94	80.978	Ovis_aries
ENSMALG00000007061	exosc1	92	74.731	ENSPPAG00000039842	EXOSC1	94	74.731	Pan_paniscus
ENSMALG00000007061	exosc1	92	81.522	ENSPPRG00000023366	EXOSC1	94	81.522	Panthera_pardus
ENSMALG00000007061	exosc1	92	81.522	ENSPTIG00000017701	EXOSC1	94	81.522	Panthera_tigris_altaica
ENSMALG00000007061	exosc1	92	80.978	ENSPTRG00000002808	EXOSC1	94	80.978	Pan_troglodytes
ENSMALG00000007061	exosc1	92	80.978	ENSPANG00000021324	EXOSC1	94	80.978	Papio_anubis
ENSMALG00000007061	exosc1	93	91.892	ENSPKIG00000016037	exosc1	95	91.892	Paramormyrops_kingsleyae
ENSMALG00000007061	exosc1	76	76.433	ENSPSIG00000013571	EXOSC1	98	80.165	Pelodiscus_sinensis
ENSMALG00000007061	exosc1	93	82.162	ENSPMGG00000014002	exosc1	95	82.162	Periophthalmus_magnuspinnatus
ENSMALG00000007061	exosc1	92	79.891	ENSPEMG00000010710	-	94	79.891	Peromyscus_maniculatus_bairdii
ENSMALG00000007061	exosc1	94	68.617	ENSPMAG00000000195	exosc1	96	68.617	Petromyzon_marinus
ENSMALG00000007061	exosc1	97	77.720	ENSPCIG00000002210	EXOSC1	96	77.720	Phascolarctos_cinereus
ENSMALG00000007061	exosc1	93	89.730	ENSPFOG00000006755	exosc1	91	89.730	Poecilia_formosa
ENSMALG00000007061	exosc1	93	89.730	ENSPLAG00000005880	exosc1	95	89.730	Poecilia_latipinna
ENSMALG00000007061	exosc1	93	89.730	ENSPMEG00000015598	exosc1	91	89.730	Poecilia_mexicana
ENSMALG00000007061	exosc1	93	76.757	ENSPREG00000000405	exosc1	89	76.757	Poecilia_reticulata
ENSMALG00000007061	exosc1	92	80.978	ENSPPYG00000002531	EXOSC1	94	80.978	Pongo_abelii
ENSMALG00000007061	exosc1	92	79.891	ENSPCAG00000009135	EXOSC1	94	79.891	Procavia_capensis
ENSMALG00000007061	exosc1	92	74.457	ENSPCOG00000027539	EXOSC1	94	74.457	Propithecus_coquereli
ENSMALG00000007061	exosc1	92	80.978	ENSPVAG00000003372	EXOSC1	94	80.978	Pteropus_vampyrus
ENSMALG00000007061	exosc1	93	96.757	ENSPNYG00000021745	exosc1	95	96.757	Pundamilia_nyererei
ENSMALG00000007061	exosc1	93	92.973	ENSPNAG00000001944	exosc1	95	92.973	Pygocentrus_nattereri
ENSMALG00000007061	exosc1	92	79.891	ENSRNOG00000048708	Exosc1	94	79.891	Rattus_norvegicus
ENSMALG00000007061	exosc1	92	80.978	ENSRBIG00000035618	EXOSC1	94	80.978	Rhinopithecus_bieti
ENSMALG00000007061	exosc1	92	80.978	ENSRROG00000032589	EXOSC1	87	80.978	Rhinopithecus_roxellana
ENSMALG00000007061	exosc1	64	37.423	YNL232W	CSL4	55	37.423	Saccharomyces_cerevisiae
ENSMALG00000007061	exosc1	92	80.978	ENSSBOG00000000359	EXOSC1	94	80.978	Saimiri_boliviensis_boliviensis
ENSMALG00000007061	exosc1	73	88.435	ENSSHAG00000018219	EXOSC1	100	88.435	Sarcophilus_harrisii
ENSMALG00000007061	exosc1	93	89.730	ENSSFOG00015016289	-	95	89.730	Scleropages_formosus
ENSMALG00000007061	exosc1	99	85.859	ENSSFOG00015009069	exosc1	95	90.811	Scleropages_formosus
ENSMALG00000007061	exosc1	93	97.297	ENSSMAG00000003721	exosc1	95	97.297	Scophthalmus_maximus
ENSMALG00000007061	exosc1	93	96.216	ENSSDUG00000002993	exosc1	95	96.216	Seriola_dumerili
ENSMALG00000007061	exosc1	93	96.216	ENSSLDG00000025181	exosc1	95	96.216	Seriola_lalandi_dorsalis
ENSMALG00000007061	exosc1	92	69.022	ENSSARG00000000162	EXOSC1	94	69.022	Sorex_araneus
ENSMALG00000007061	exosc1	92	75.543	ENSSPUG00000012263	EXOSC1	94	75.543	Sphenodon_punctatus
ENSMALG00000007061	exosc1	93	88.649	ENSSPAG00000016792	exosc1	79	88.649	Stegastes_partitus
ENSMALG00000007061	exosc1	92	80.435	ENSSSCG00000010518	EXOSC1	86	80.435	Sus_scrofa
ENSMALG00000007061	exosc1	95	77.778	ENSTGUG00000009692	EXOSC1	97	77.778	Taeniopygia_guttata
ENSMALG00000007061	exosc1	93	83.243	ENSTRUG00000007706	exosc1	96	83.243	Takifugu_rubripes
ENSMALG00000007061	exosc1	93	82.447	ENSTNIG00000014079	exosc1	95	82.447	Tetraodon_nigroviridis
ENSMALG00000007061	exosc1	92	75.000	ENSTBEG00000006011	EXOSC1	94	75.000	Tupaia_belangeri
ENSMALG00000007061	exosc1	92	81.421	ENSTTRG00000009887	EXOSC1	99	81.421	Tursiops_truncatus
ENSMALG00000007061	exosc1	92	64.130	ENSUAMG00000010266	EXOSC1	94	64.130	Ursus_americanus
ENSMALG00000007061	exosc1	92	64.130	ENSUMAG00000022002	EXOSC1	94	64.130	Ursus_maritimus
ENSMALG00000007061	exosc1	92	80.978	ENSVVUG00000023192	EXOSC1	60	80.978	Vulpes_vulpes
ENSMALG00000007061	exosc1	92	77.174	ENSXETG00000003434	exosc1	95	77.174	Xenopus_tropicalis
ENSMALG00000007061	exosc1	61	89.256	ENSXCOG00000014499	exosc1	93	89.256	Xiphophorus_couchianus
ENSMALG00000007061	exosc1	93	77.297	ENSXMAG00000023382	exosc1	89	77.297	Xiphophorus_maculatus