EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000007132 (Gene tree)
Gene ID: 109967129
Gene Symbol: csde1
Alias: fa92c07|si:ch211-261n11.2|wu:fa92c07|wu:fa97c10|wu:fb53f07|wu:fb78d03
Full Name: cold shock domain containing E1
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 7574 bases
Position: chrKV884814.1:1724206-1731779
Accession: 109967129
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000010039	CSD	PF00313.22	3e-82	1	5
ENSMALP00000010039	CSD	PF00313.22	3e-82	2	5
ENSMALP00000010039	CSD	PF00313.22	3e-82	3	5
ENSMALP00000010039	CSD	PF00313.22	3e-82	4	5
ENSMALP00000010039	CSD	PF00313.22	3e-82	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000010252	-	2310	XM_020612484	ENSMALP00000010039	769 (aa)	XP_020468140	-

Gene Model

Click here to download ENSMALG00000007132's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000007132's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000007132	csde1	100	77.792	ENSG00000009307	CSDE1	100	86.029	Homo_sapiens
ENSMALG00000007132	csde1	100	95.319	ENSAPOG00000015538	csde1	100	95.319	Acanthochromis_polyacanthus
ENSMALG00000007132	csde1	100	77.013	ENSAMEG00000017129	CSDE1	94	77.013	Ailuropoda_melanoleuca
ENSMALG00000007132	csde1	90	92.162	ENSACIG00000015175	csde1	100	92.162	Amphilophus_citrinellus
ENSMALG00000007132	csde1	100	95.319	ENSAOCG00000011510	csde1	100	95.319	Amphiprion_ocellaris
ENSMALG00000007132	csde1	100	95.449	ENSAPEG00000007194	csde1	100	95.449	Amphiprion_percula
ENSMALG00000007132	csde1	100	94.408	ENSATEG00000003864	csde1	100	94.408	Anabas_testudineus
ENSMALG00000007132	csde1	100	79.610	ENSAPLG00000008797	CSDE1	100	79.610	Anas_platyrhynchos
ENSMALG00000007132	csde1	100	76.654	ENSACAG00000003120	CSDE1	100	76.654	Anolis_carolinensis
ENSMALG00000007132	csde1	100	77.662	ENSANAG00000024665	CSDE1	95	78.041	Aotus_nancymaae
ENSMALG00000007132	csde1	90	62.544	ENSANAG00000028396	-	91	62.544	Aotus_nancymaae
ENSMALG00000007132	csde1	100	93.238	ENSACLG00000013296	csde1	100	93.238	Astatotilapia_calliptera
ENSMALG00000007132	csde1	100	86.770	ENSAMXG00000007436	csde1	100	86.770	Astyanax_mexicanus
ENSMALG00000007132	csde1	100	77.532	ENSBTAG00000000678	CSDE1	100	77.532	Bos_taurus
ENSMALG00000007132	csde1	100	77.662	ENSCJAG00000012565	CSDE1	94	77.662	Callithrix_jacchus
ENSMALG00000007132	csde1	98	78.249	ENSCAFG00000009618	CSDE1	94	78.249	Canis_familiaris
ENSMALG00000007132	csde1	100	78.052	ENSCAFG00020000481	CSDE1	100	78.052	Canis_lupus_dingo
ENSMALG00000007132	csde1	100	77.532	ENSCHIG00000017250	CSDE1	100	77.532	Capra_hircus
ENSMALG00000007132	csde1	100	77.922	ENSTSYG00000003747	CSDE1	100	77.922	Carlito_syrichta
ENSMALG00000007132	csde1	100	53.683	ENSCAPG00000015128	CSDE1	100	53.683	Cavia_aperea
ENSMALG00000007132	csde1	100	72.348	ENSCPOG00000040388	CSDE1	100	72.348	Cavia_porcellus
ENSMALG00000007132	csde1	95	56.635	ENSCCAG00000033677	-	99	56.635	Cebus_capucinus
ENSMALG00000007132	csde1	96	55.111	ENSCCAG00000030878	-	91	55.111	Cebus_capucinus
ENSMALG00000007132	csde1	100	77.662	ENSCCAG00000036794	CSDE1	100	74.657	Cebus_capucinus
ENSMALG00000007132	csde1	100	77.792	ENSCATG00000036962	CSDE1	97	77.792	Cercocebus_atys
ENSMALG00000007132	csde1	100	78.052	ENSCLAG00000006618	CSDE1	100	78.052	Chinchilla_lanigera
ENSMALG00000007132	csde1	100	74.782	ENSCSAG00000001658	CSDE1	95	74.782	Chlorocebus_sabaeus
ENSMALG00000007132	csde1	100	75.000	ENSCHOG00000000918	CSDE1	89	75.000	Choloepus_hoffmanni
ENSMALG00000007132	csde1	100	79.870	ENSCPBG00000016547	CSDE1	100	79.870	Chrysemys_picta_bellii
ENSMALG00000007132	csde1	98	42.909	ENSCING00000014465	-	96	42.909	Ciona_intestinalis
ENSMALG00000007132	csde1	97	41.806	ENSCSAVG00000008100	-	99	41.667	Ciona_savignyi
ENSMALG00000007132	csde1	87	79.705	ENSCANG00000031069	-	94	79.705	Colobus_angolensis_palliatus
ENSMALG00000007132	csde1	100	77.792	ENSCANG00000035096	CSDE1	97	77.792	Colobus_angolensis_palliatus
ENSMALG00000007132	csde1	100	77.143	ENSCGRG00001016833	-	100	77.143	Cricetulus_griseus_chok1gshd
ENSMALG00000007132	csde1	100	63.247	ENSCGRG00001014011	-	100	63.247	Cricetulus_griseus_chok1gshd
ENSMALG00000007132	csde1	96	73.556	ENSCGRG00000002225	-	100	73.556	Cricetulus_griseus_crigri
ENSMALG00000007132	csde1	100	73.478	ENSCGRG00000005831	-	100	73.478	Cricetulus_griseus_crigri
ENSMALG00000007132	csde1	100	91.678	ENSCSEG00000002620	csde1	100	91.678	Cynoglossus_semilaevis
ENSMALG00000007132	csde1	100	92.198	ENSCVAG00000001344	csde1	100	92.198	Cyprinodon_variegatus
ENSMALG00000007132	csde1	100	84.355	ENSDARG00000074758	csde1	100	85.185	Danio_rerio
ENSMALG00000007132	csde1	100	78.210	ENSDNOG00000010287	-	93	78.210	Dasypus_novemcinctus
ENSMALG00000007132	csde1	59	57.203	ENSDNOG00000034464	-	99	57.203	Dasypus_novemcinctus
ENSMALG00000007132	csde1	100	74.407	ENSDORG00000011609	Csde1	100	76.602	Dipodomys_ordii
ENSMALG00000007132	csde1	96	48.671	FBgn0263352	Unr	80	47.628	Drosophila_melanogaster
ENSMALG00000007132	csde1	99	60.233	ENSETEG00000013678	-	99	60.233	Echinops_telfairi
ENSMALG00000007132	csde1	93	72.334	ENSETEG00000002491	-	82	72.334	Echinops_telfairi
ENSMALG00000007132	csde1	79	53.960	ENSETEG00000007109	-	99	53.960	Echinops_telfairi
ENSMALG00000007132	csde1	90	68.819	ENSETEG00000006280	-	100	68.819	Echinops_telfairi
ENSMALG00000007132	csde1	99	54.064	ENSEBUG00000008647	csde1	99	52.387	Eptatretus_burgeri
ENSMALG00000007132	csde1	100	78.312	ENSEASG00005006284	CSDE1	100	75.281	Equus_asinus_asinus
ENSMALG00000007132	csde1	100	78.312	ENSECAG00000020885	CSDE1	99	78.182	Equus_caballus
ENSMALG00000007132	csde1	93	81.931	ENSEEUG00000006286	CSDE1	68	81.931	Erinaceus_europaeus
ENSMALG00000007132	csde1	100	87.451	ENSELUG00000015507	csde1	100	87.451	Esox_lucius
ENSMALG00000007132	csde1	100	78.052	ENSFCAG00000029266	CSDE1	100	78.052	Felis_catus
ENSMALG00000007132	csde1	100	76.309	ENSFALG00000003407	CSDE1	100	76.309	Ficedula_albicollis
ENSMALG00000007132	csde1	100	74.407	ENSFDAG00000007882	CSDE1	100	76.602	Fukomys_damarensis
ENSMALG00000007132	csde1	98	92.053	ENSFHEG00000010799	csde1	99	92.053	Fundulus_heteroclitus
ENSMALG00000007132	csde1	99	86.717	ENSGMOG00000012731	csde1	100	86.717	Gadus_morhua
ENSMALG00000007132	csde1	98	76.463	ENSGALG00000002139	CSDE1	98	76.463	Gallus_gallus
ENSMALG00000007132	csde1	94	91.756	ENSGAFG00000005241	csde1	95	91.756	Gambusia_affinis
ENSMALG00000007132	csde1	99	90.464	ENSGACG00000004544	csde1	100	90.464	Gasterosteus_aculeatus
ENSMALG00000007132	csde1	100	79.870	ENSGAGG00000017685	CSDE1	100	76.779	Gopherus_agassizii
ENSMALG00000007132	csde1	100	77.792	ENSGGOG00000002164	CSDE1	100	77.792	Gorilla_gorilla
ENSMALG00000007132	csde1	100	93.238	ENSHBUG00000020315	csde1	100	93.238	Haplochromis_burtoni
ENSMALG00000007132	csde1	100	70.779	ENSHGLG00000009620	-	100	70.909	Heterocephalus_glaber_female
ENSMALG00000007132	csde1	99	67.366	ENSHGLG00000007471	-	98	67.366	Heterocephalus_glaber_female
ENSMALG00000007132	csde1	96	66.444	ENSHGLG00000010039	-	100	66.444	Heterocephalus_glaber_female
ENSMALG00000007132	csde1	100	63.648	ENSHGLG00000019549	-	100	63.648	Heterocephalus_glaber_female
ENSMALG00000007132	csde1	100	70.000	ENSHGLG00000003829	-	100	70.000	Heterocephalus_glaber_female
ENSMALG00000007132	csde1	96	68.107	ENSHGLG00000008555	-	100	68.107	Heterocephalus_glaber_female
ENSMALG00000007132	csde1	99	59.825	ENSHGLG00000000650	-	99	59.825	Heterocephalus_glaber_female
ENSMALG00000007132	csde1	93	65.556	ENSHGLG00100004195	-	100	65.556	Heterocephalus_glaber_male
ENSMALG00000007132	csde1	100	65.584	ENSHGLG00100012072	-	100	65.584	Heterocephalus_glaber_male
ENSMALG00000007132	csde1	99	63.217	ENSHGLG00100002245	-	99	63.217	Heterocephalus_glaber_male
ENSMALG00000007132	csde1	99	66.448	ENSHGLG00100007287	-	98	66.448	Heterocephalus_glaber_male
ENSMALG00000007132	csde1	100	77.662	ENSHGLG00100019438	-	100	77.662	Heterocephalus_glaber_male
ENSMALG00000007132	csde1	96	61.333	ENSHGLG00100004833	-	100	61.333	Heterocephalus_glaber_male
ENSMALG00000007132	csde1	100	63.636	ENSHGLG00100001846	-	100	63.636	Heterocephalus_glaber_male
ENSMALG00000007132	csde1	96	66.222	ENSHGLG00100006910	-	100	66.222	Heterocephalus_glaber_male
ENSMALG00000007132	csde1	100	90.767	ENSHCOG00000004158	csde1	100	90.767	Hippocampus_comes
ENSMALG00000007132	csde1	100	85.214	ENSIPUG00000000355	csde1	100	85.214	Ictalurus_punctatus
ENSMALG00000007132	csde1	93	56.492	ENSSTOG00000032722	-	99	63.636	Ictidomys_tridecemlineatus
ENSMALG00000007132	csde1	100	64.158	ENSSTOG00000030994	-	100	64.158	Ictidomys_tridecemlineatus
ENSMALG00000007132	csde1	100	74.407	ENSJJAG00000019571	Csde1	100	76.602	Jaculus_jaculus
ENSMALG00000007132	csde1	100	88.279	ENSKMAG00000005685	csde1	100	87.841	Kryptolebias_marmoratus
ENSMALG00000007132	csde1	100	94.148	ENSLBEG00000014770	csde1	100	94.148	Labrus_bergylta
ENSMALG00000007132	csde1	100	73.859	ENSLACG00000018452	CSDE1	94	73.859	Latimeria_chalumnae
ENSMALG00000007132	csde1	100	83.835	ENSLOCG00000010413	csde1	94	83.835	Lepisosteus_oculatus
ENSMALG00000007132	csde1	100	77.403	ENSLAFG00000007150	CSDE1	96	77.403	Loxodonta_africana
ENSMALG00000007132	csde1	100	77.792	ENSMFAG00000003674	CSDE1	100	77.792	Macaca_fascicularis
ENSMALG00000007132	csde1	100	77.792	ENSMMUG00000001974	CSDE1	100	77.792	Macaca_mulatta
ENSMALG00000007132	csde1	100	77.792	ENSMNEG00000045247	CSDE1	97	77.792	Macaca_nemestrina
ENSMALG00000007132	csde1	100	77.532	ENSMLEG00000038673	CSDE1	94	77.532	Mandrillus_leucophaeus
ENSMALG00000007132	csde1	100	95.709	ENSMAMG00000008821	csde1	100	95.709	Mastacembelus_armatus
ENSMALG00000007132	csde1	100	93.238	ENSMZEG00005021675	csde1	100	93.238	Maylandia_zebra
ENSMALG00000007132	csde1	100	79.507	ENSMGAG00000016381	CSDE1	100	79.507	Meleagris_gallopavo
ENSMALG00000007132	csde1	100	74.157	ENSMAUG00000014031	Csde1	100	76.304	Mesocricetus_auratus
ENSMALG00000007132	csde1	100	78.312	ENSMICG00000002050	CSDE1	96	78.255	Microcebus_murinus
ENSMALG00000007132	csde1	100	77.143	ENSMOCG00000018960	Csde1	100	77.143	Microtus_ochrogaster
ENSMALG00000007132	csde1	100	95.189	ENSMMOG00000015075	csde1	100	95.189	Mola_mola
ENSMALG00000007132	csde1	100	78.497	ENSMODG00000004685	CSDE1	100	76.155	Monodelphis_domestica
ENSMALG00000007132	csde1	100	77.273	MGP_CAROLIEiJ_G0025444	Csde1	100	84.768	Mus_caroli
ENSMALG00000007132	csde1	100	77.273	ENSMUSG00000068823	Csde1	100	84.768	Mus_musculus
ENSMALG00000007132	csde1	100	77.273	MGP_PahariEiJ_G0026888	Csde1	100	84.768	Mus_pahari
ENSMALG00000007132	csde1	100	77.273	MGP_SPRETEiJ_G0026394	Csde1	100	84.768	Mus_spretus
ENSMALG00000007132	csde1	98	75.159	ENSMPUG00000005753	CSDE1	99	75.159	Mustela_putorius_furo
ENSMALG00000007132	csde1	100	77.532	ENSMLUG00000005681	CSDE1	94	77.532	Myotis_lucifugus
ENSMALG00000007132	csde1	96	52.889	ENSNGAG00000012599	-	100	52.889	Nannospalax_galili
ENSMALG00000007132	csde1	100	74.282	ENSNGAG00000021929	Csde1	100	76.453	Nannospalax_galili
ENSMALG00000007132	csde1	100	93.238	ENSNBRG00000020808	csde1	100	93.238	Neolamprologus_brichardi
ENSMALG00000007132	csde1	100	77.792	ENSNLEG00000004842	CSDE1	97	77.792	Nomascus_leucogenys
ENSMALG00000007132	csde1	98	75.995	ENSMEUG00000002677	CSDE1	99	75.995	Notamacropus_eugenii
ENSMALG00000007132	csde1	98	71.739	ENSOPRG00000005002	CSDE1	82	71.739	Ochotona_princeps
ENSMALG00000007132	csde1	100	74.282	ENSODEG00000007383	-	100	76.602	Octodon_degus
ENSMALG00000007132	csde1	96	52.759	ENSODEG00000005979	-	98	52.759	Octodon_degus
ENSMALG00000007132	csde1	100	87.638	ENSONIG00000009309	csde1	100	87.638	Oreochromis_niloticus
ENSMALG00000007132	csde1	100	81.356	ENSOANG00000003346	-	82	81.356	Ornithorhynchus_anatinus
ENSMALG00000007132	csde1	100	77.532	ENSOCUG00000016438	CSDE1	94	77.532	Oryctolagus_cuniculus
ENSMALG00000007132	csde1	100	91.547	ENSORLG00000000707	csde1	100	91.547	Oryzias_latipes
ENSMALG00000007132	csde1	100	88.221	ENSORLG00020005148	csde1	100	86.169	Oryzias_latipes_hni
ENSMALG00000007132	csde1	100	91.417	ENSORLG00015019415	csde1	100	91.417	Oryzias_latipes_hsok
ENSMALG00000007132	csde1	100	91.547	ENSOMEG00000015656	csde1	100	92.198	Oryzias_melastigma
ENSMALG00000007132	csde1	100	78.182	ENSOGAG00000012127	CSDE1	94	78.182	Otolemur_garnettii
ENSMALG00000007132	csde1	100	77.532	ENSOARG00000020034	CSDE1	94	77.532	Ovis_aries
ENSMALG00000007132	csde1	100	77.792	ENSPPAG00000025861	CSDE1	100	77.792	Pan_paniscus
ENSMALG00000007132	csde1	100	78.052	ENSPPRG00000006747	CSDE1	94	78.052	Panthera_pardus
ENSMALG00000007132	csde1	100	78.052	ENSPTIG00000015468	CSDE1	100	75.031	Panthera_tigris_altaica
ENSMALG00000007132	csde1	100	77.792	ENSPTRG00000033721	CSDE1	97	77.792	Pan_troglodytes
ENSMALG00000007132	csde1	100	77.792	ENSPANG00000018873	CSDE1	100	77.792	Papio_anubis
ENSMALG00000007132	csde1	100	86.996	ENSPKIG00000009459	csde1	100	86.996	Paramormyrops_kingsleyae
ENSMALG00000007132	csde1	96	77.093	ENSPSIG00000003823	CSDE1	96	77.093	Pelodiscus_sinensis
ENSMALG00000007132	csde1	100	90.390	ENSPMGG00000000772	csde1	100	90.390	Periophthalmus_magnuspinnatus
ENSMALG00000007132	csde1	100	74.407	ENSPEMG00000020357	-	100	76.602	Peromyscus_maniculatus_bairdii
ENSMALG00000007132	csde1	100	76.155	ENSPCIG00000022587	CSDE1	100	76.155	Phascolarctos_cinereus
ENSMALG00000007132	csde1	97	90.047	ENSPFOG00000012664	csde1	100	90.202	Poecilia_formosa
ENSMALG00000007132	csde1	95	84.946	ENSPLAG00000017680	csde1	93	84.946	Poecilia_latipinna
ENSMALG00000007132	csde1	95	85.407	ENSPMEG00000005094	csde1	95	85.407	Poecilia_mexicana
ENSMALG00000007132	csde1	100	88.030	ENSPREG00000011631	csde1	100	85.181	Poecilia_reticulata
ENSMALG00000007132	csde1	100	74.657	ENSPPYG00000000996	CSDE1	100	74.657	Pongo_abelii
ENSMALG00000007132	csde1	100	74.935	ENSPCAG00000014368	CSDE1	94	74.935	Procavia_capensis
ENSMALG00000007132	csde1	88	70.632	ENSPCOG00000008223	-	92	70.632	Propithecus_coquereli
ENSMALG00000007132	csde1	100	78.052	ENSPCOG00000017893	CSDE1	100	78.052	Propithecus_coquereli
ENSMALG00000007132	csde1	100	72.597	ENSPVAG00000008225	CSDE1	95	72.597	Pteropus_vampyrus
ENSMALG00000007132	csde1	100	93.238	ENSPNYG00000013745	csde1	100	93.238	Pundamilia_nyererei
ENSMALG00000007132	csde1	100	87.549	ENSPNAG00000001958	csde1	100	87.549	Pygocentrus_nattereri
ENSMALG00000007132	csde1	100	74.157	ENSRNOG00000061058	Csde1	100	74.157	Rattus_norvegicus
ENSMALG00000007132	csde1	100	73.446	ENSRBIG00000038966	-	94	73.446	Rhinopithecus_bieti
ENSMALG00000007132	csde1	100	74.838	ENSRBIG00000038088	-	100	74.838	Rhinopithecus_bieti
ENSMALG00000007132	csde1	100	77.792	ENSRROG00000043101	CSDE1	97	77.792	Rhinopithecus_roxellana
ENSMALG00000007132	csde1	100	77.662	ENSSBOG00000035592	CSDE1	95	77.662	Saimiri_boliviensis_boliviensis
ENSMALG00000007132	csde1	100	79.221	ENSSHAG00000009831	CSDE1	100	79.221	Sarcophilus_harrisii
ENSMALG00000007132	csde1	100	84.675	ENSSFOG00015007498	csde1	100	84.675	Scleropages_formosus
ENSMALG00000007132	csde1	100	94.798	ENSSMAG00000007203	csde1	100	94.798	Scophthalmus_maximus
ENSMALG00000007132	csde1	100	95.839	ENSSDUG00000015380	csde1	100	95.839	Seriola_dumerili
ENSMALG00000007132	csde1	100	95.839	ENSSLDG00000008819	csde1	100	95.839	Seriola_lalandi_dorsalis
ENSMALG00000007132	csde1	100	77.403	ENSSARG00000000738	CSDE1	94	77.403	Sorex_araneus
ENSMALG00000007132	csde1	100	80.000	ENSSPUG00000008714	CSDE1	100	80.000	Sphenodon_punctatus
ENSMALG00000007132	csde1	100	95.189	ENSSPAG00000000716	csde1	100	95.189	Stegastes_partitus
ENSMALG00000007132	csde1	100	78.182	ENSSSCG00000006752	CSDE1	100	78.182	Sus_scrofa
ENSMALG00000007132	csde1	100	75.218	ENSTGUG00000000972	CSDE1	100	75.218	Taeniopygia_guttata
ENSMALG00000007132	csde1	100	87.516	ENSTRUG00000007996	csde1	100	87.516	Takifugu_rubripes
ENSMALG00000007132	csde1	93	84.291	ENSTNIG00000010878	csde1	100	84.291	Tetraodon_nigroviridis
ENSMALG00000007132	csde1	92	80.982	ENSTBEG00000011880	-	60	80.982	Tupaia_belangeri
ENSMALG00000007132	csde1	100	77.273	ENSTTRG00000015583	CSDE1	94	77.273	Tursiops_truncatus
ENSMALG00000007132	csde1	89	82.736	ENSUAMG00000021779	-	98	82.736	Ursus_americanus
ENSMALG00000007132	csde1	87	73.397	ENSUAMG00000024289	-	99	73.397	Ursus_americanus
ENSMALG00000007132	csde1	100	71.299	ENSUMAG00000009720	-	97	71.299	Ursus_maritimus
ENSMALG00000007132	csde1	86	73.223	ENSUMAG00000011714	-	99	73.223	Ursus_maritimus
ENSMALG00000007132	csde1	100	80.233	ENSVPAG00000000749	CSDE1	79	80.233	Vicugna_pacos
ENSMALG00000007132	csde1	93	73.508	ENSVVUG00000009890	CSDE1	94	73.508	Vulpes_vulpes
ENSMALG00000007132	csde1	100	75.995	ENSXETG00000021448	csde1	100	75.995	Xenopus_tropicalis
ENSMALG00000007132	csde1	94	94.336	ENSXCOG00000000035	csde1	89	94.336	Xiphophorus_couchianus
ENSMALG00000007132	csde1	98	91.910	ENSXMAG00000009080	csde1	98	91.910	Xiphophorus_maculatus