EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000007520 (Gene tree)
Gene ID: 109952516
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein C-like
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 2454 bases
Position: chrKV885156.1:49442-51895
Accession: 109952516
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000010563	RRM_1	PF00076.22	3.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000010787	-	810	XM_020587637	ENSMALP00000010563	269 (aa)	XP_020443293	-

Gene Model

Click here to download ENSMALG00000007520's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000007520's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000007520	-	85	76.285	ENSMALG00000014623	-	81	76.078
ENSMALG00000007520	-	76	56.221	ENSMALG00000012952	-	73	55.349
ENSMALG00000007520	-	77	50.442	ENSMALG00000007071	raly	54	51.429
ENSMALG00000007520	-	99	45.918	ENSMALG00000019019	-	59	53.425

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000007520	-	95	50.545	ENSG00000184672	RALYL	93	78.481	Homo_sapiens
ENSMALG00000007520	-	90	83.521	ENSAPOG00000006963	hnrnpc	88	82.836	Acanthochromis_polyacanthus
ENSMALG00000007520	-	91	84.249	ENSACIG00000000270	-	86	82.353	Amphilophus_citrinellus
ENSMALG00000007520	-	99	69.965	ENSACIG00000016568	-	80	82.075	Amphilophus_citrinellus
ENSMALG00000007520	-	83	74.104	ENSAOCG00000021616	-	79	77.647	Amphiprion_ocellaris
ENSMALG00000007520	-	90	83.146	ENSAOCG00000003896	-	88	82.463	Amphiprion_ocellaris
ENSMALG00000007520	-	85	74.118	ENSAPEG00000019962	-	82	77.255	Amphiprion_percula
ENSMALG00000007520	-	90	83.146	ENSAPEG00000001489	-	88	82.463	Amphiprion_percula
ENSMALG00000007520	-	99	70.567	ENSATEG00000018006	-	99	69.858	Anabas_testudineus
ENSMALG00000007520	-	99	81.081	ENSATEG00000011734	-	85	81.102	Anabas_testudineus
ENSMALG00000007520	-	95	46.367	ENSAPLG00000015574	RALYL	75	50.909	Anas_platyrhynchos
ENSMALG00000007520	-	95	47.222	ENSACAG00000028464	RALYL	74	50.000	Anolis_carolinensis
ENSMALG00000007520	-	95	50.545	ENSANAG00000023383	RALYL	73	54.106	Aotus_nancymaae
ENSMALG00000007520	-	98	79.655	ENSACLG00000013636	-	88	81.293	Astatotilapia_calliptera
ENSMALG00000007520	-	98	80.000	ENSACLG00000000995	-	96	81.633	Astatotilapia_calliptera
ENSMALG00000007520	-	85	72.374	ENSACLG00000005707	-	86	76.285	Astatotilapia_calliptera
ENSMALG00000007520	-	70	71.500	ENSAMXG00000042946	hnrnpc	95	71.892	Astyanax_mexicanus
ENSMALG00000007520	-	84	75.620	ENSAMXG00000034915	zgc:55733	87	75.207	Astyanax_mexicanus
ENSMALG00000007520	-	95	50.545	ENSCJAG00000000402	RALYL	73	54.106	Callithrix_jacchus
ENSMALG00000007520	-	95	47.902	ENSCPOG00000012314	RALYL	74	51.598	Cavia_porcellus
ENSMALG00000007520	-	95	50.545	ENSCCAG00000025003	RALYL	77	78.481	Cebus_capucinus
ENSMALG00000007520	-	95	50.545	ENSCATG00000042145	RALYL	84	49.789	Cercocebus_atys
ENSMALG00000007520	-	95	47.902	ENSCLAG00000005228	RALYL	74	51.598	Chinchilla_lanigera
ENSMALG00000007520	-	73	51.770	ENSCHOG00000013228	RALYL	75	52.212	Choloepus_hoffmanni
ENSMALG00000007520	-	95	50.545	ENSCANG00000039144	RALYL	84	49.789	Colobus_angolensis_palliatus
ENSMALG00000007520	-	95	47.569	ENSCGRG00001009241	Ralyl	74	51.818	Cricetulus_griseus_chok1gshd
ENSMALG00000007520	-	75	74.194	ENSCSEG00000019769	-	72	74.882	Cynoglossus_semilaevis
ENSMALG00000007520	-	80	75.109	ENSCSEG00000021349	-	79	73.705	Cynoglossus_semilaevis
ENSMALG00000007520	-	83	76.587	ENSCVAG00000016981	-	88	68.403	Cyprinodon_variegatus
ENSMALG00000007520	-	100	70.934	ENSCVAG00000002797	-	100	70.588	Cyprinodon_variegatus
ENSMALG00000007520	-	91	73.846	ENSDARG00000103845	zgc:55733	91	73.663	Danio_rerio
ENSMALG00000007520	-	80	73.799	ENSDARG00000053810	hnrnpc	80	70.800	Danio_rerio
ENSMALG00000007520	-	94	48.772	ENSDORG00000003721	Ralyl	74	51.364	Dipodomys_ordii
ENSMALG00000007520	-	57	54.857	ENSETEG00000014028	RALYL	90	50.857	Echinops_telfairi
ENSMALG00000007520	-	88	44.882	ENSEBUG00000012363	hnrnpc	64	52.607	Eptatretus_burgeri
ENSMALG00000007520	-	98	44.643	ENSEBUG00000006049	RALYL	94	44.643	Eptatretus_burgeri
ENSMALG00000007520	-	95	47.917	ENSEEUG00000007202	RALYL	76	50.450	Erinaceus_europaeus
ENSMALG00000007520	-	91	68.199	ENSELUG00000007714	-	89	73.077	Esox_lucius
ENSMALG00000007520	-	84	73.622	ENSELUG00000004132	-	88	71.264	Esox_lucius
ENSMALG00000007520	-	95	46.181	ENSFALG00000008647	RALYL	97	52.607	Ficedula_albicollis
ENSMALG00000007520	-	85	72.963	ENSFHEG00000007278	-	98	61.491	Fundulus_heteroclitus
ENSMALG00000007520	-	90	76.580	ENSFHEG00000003605	-	84	74.118	Fundulus_heteroclitus
ENSMALG00000007520	-	95	47.842	ENSGALG00000036938	RALYL	74	50.455	Gallus_gallus
ENSMALG00000007520	-	98	66.667	ENSGAFG00000020992	-	76	81.132	Gambusia_affinis
ENSMALG00000007520	-	98	74.227	ENSGAFG00000020486	-	80	77.358	Gambusia_affinis
ENSMALG00000007520	-	88	72.932	ENSGACG00000017772	-	97	72.222	Gasterosteus_aculeatus
ENSMALG00000007520	-	77	75.117	ENSGACG00000018932	-	85	76.471	Gasterosteus_aculeatus
ENSMALG00000007520	-	95	50.545	ENSGGOG00000000841	RALYL	84	49.789	Gorilla_gorilla
ENSMALG00000007520	-	85	72.763	ENSHBUG00000010527	-	81	75.097	Haplochromis_burtoni
ENSMALG00000007520	-	98	80.345	ENSHBUG00000018342	-	96	81.973	Haplochromis_burtoni
ENSMALG00000007520	-	95	47.552	ENSHGLG00000004866	RALYL	74	50.228	Heterocephalus_glaber_female
ENSMALG00000007520	-	95	47.552	ENSHGLG00100017480	RALYL	74	50.228	Heterocephalus_glaber_male
ENSMALG00000007520	-	83	71.756	ENSHCOG00000012333	hnrnpc	87	70.412	Hippocampus_comes
ENSMALG00000007520	-	84	72.065	ENSIPUG00000011271	hnrnpc	96	75.000	Ictalurus_punctatus
ENSMALG00000007520	-	84	75.620	ENSIPUG00000008666	zgc:55733	92	78.199	Ictalurus_punctatus
ENSMALG00000007520	-	95	48.264	ENSSTOG00000012583	RALYL	76	50.909	Ictidomys_tridecemlineatus
ENSMALG00000007520	-	83	71.429	ENSKMAG00000018265	-	80	73.438	Kryptolebias_marmoratus
ENSMALG00000007520	-	91	84.836	ENSKMAG00000011170	-	88	83.539	Kryptolebias_marmoratus
ENSMALG00000007520	-	84	73.123	ENSLBEG00000006193	-	80	72.549	Labrus_bergylta
ENSMALG00000007520	-	91	73.665	ENSLBEG00000024418	-	86	70.270	Labrus_bergylta
ENSMALG00000007520	-	90	78.439	ENSLBEG00000006979	-	85	77.733	Labrus_bergylta
ENSMALG00000007520	-	85	64.093	ENSLOCG00000002560	hnrnpc	89	62.308	Lepisosteus_oculatus
ENSMALG00000007520	-	95	50.545	ENSMNEG00000033288	RALYL	84	49.789	Macaca_nemestrina
ENSMALG00000007520	-	95	50.545	ENSMLEG00000038284	RALYL	84	49.789	Mandrillus_leucophaeus
ENSMALG00000007520	-	85	71.984	ENSMAMG00000008033	-	89	73.930	Mastacembelus_armatus
ENSMALG00000007520	-	90	85.547	ENSMAMG00000012236	-	81	84.711	Mastacembelus_armatus
ENSMALG00000007520	-	98	80.000	ENSMZEG00005020460	-	96	81.633	Maylandia_zebra
ENSMALG00000007520	-	85	72.374	ENSMZEG00005024249	-	81	76.285	Maylandia_zebra
ENSMALG00000007520	-	95	47.569	ENSMAUG00000015149	Ralyl	74	51.818	Mesocricetus_auratus
ENSMALG00000007520	-	95	49.275	ENSMICG00000005558	RALYL	80	78.481	Microcebus_murinus
ENSMALG00000007520	-	95	48.264	ENSMOCG00000017371	Ralyl	74	51.818	Microtus_ochrogaster
ENSMALG00000007520	-	85	79.134	ENSMMOG00000021465	-	89	80.709	Mola_mola
ENSMALG00000007520	-	83	73.684	ENSMMOG00000019520	-	81	81.429	Mola_mola
ENSMALG00000007520	-	95	47.222	ENSMUSG00000039717	Ralyl	93	77.215	Mus_musculus
ENSMALG00000007520	-	95	47.917	ENSMPUG00000010724	RALYL	74	50.909	Mustela_putorius_furo
ENSMALG00000007520	-	95	47.917	ENSNGAG00000013375	Ralyl	74	51.818	Nannospalax_galili
ENSMALG00000007520	-	99	69.039	ENSNBRG00000015676	-	74	81.517	Neolamprologus_brichardi
ENSMALG00000007520	-	91	80.882	ENSNBRG00000004912	-	91	78.733	Neolamprologus_brichardi
ENSMALG00000007520	-	95	50.545	ENSNLEG00000002702	RALYL	80	49.789	Nomascus_leucogenys
ENSMALG00000007520	-	61	48.705	ENSOPRG00000013650	-	98	47.150	Ochotona_princeps
ENSMALG00000007520	-	95	48.084	ENSODEG00000001012	RALYL	74	50.685	Octodon_degus
ENSMALG00000007520	-	90	76.190	ENSONIG00000007859	-	91	78.030	Oreochromis_niloticus
ENSMALG00000007520	-	85	72.763	ENSONIG00000018350	-	81	75.097	Oreochromis_niloticus
ENSMALG00000007520	-	98	69.416	ENSORLG00000009999	-	96	68.475	Oryzias_latipes
ENSMALG00000007520	-	83	71.042	ENSORLG00000003144	-	79	73.004	Oryzias_latipes
ENSMALG00000007520	-	98	69.072	ENSORLG00020018228	hnrnpc	96	68.136	Oryzias_latipes_hni
ENSMALG00000007520	-	98	69.416	ENSORLG00015019755	-	96	68.475	Oryzias_latipes_hsok
ENSMALG00000007520	-	83	71.042	ENSORLG00015009460	-	79	73.004	Oryzias_latipes_hsok
ENSMALG00000007520	-	98	70.447	ENSOMEG00000020488	-	96	69.492	Oryzias_melastigma
ENSMALG00000007520	-	83	73.810	ENSOMEG00000022665	-	80	75.391	Oryzias_melastigma
ENSMALG00000007520	-	95	50.545	ENSPPAG00000038705	RALYL	84	49.789	Pan_paniscus
ENSMALG00000007520	-	95	49.097	ENSPPRG00000018612	RALYL	73	54.545	Panthera_pardus
ENSMALG00000007520	-	95	49.097	ENSPTIG00000020331	RALYL	73	54.545	Panthera_tigris_altaica
ENSMALG00000007520	-	95	50.545	ENSPTRG00000020381	RALYL	84	49.789	Pan_troglodytes
ENSMALG00000007520	-	95	50.545	ENSPANG00000029305	RALYL	84	49.789	Papio_anubis
ENSMALG00000007520	-	91	70.357	ENSPKIG00000008592	-	82	71.863	Paramormyrops_kingsleyae
ENSMALG00000007520	-	91	70.968	ENSPKIG00000022837	-	82	74.131	Paramormyrops_kingsleyae
ENSMALG00000007520	-	95	46.367	ENSPSIG00000011135	RALYL	74	50.000	Pelodiscus_sinensis
ENSMALG00000007520	-	99	70.175	ENSPMGG00000013144	-	80	81.517	Periophthalmus_magnuspinnatus
ENSMALG00000007520	-	82	67.373	ENSPMGG00000017774	-	88	64.115	Periophthalmus_magnuspinnatus
ENSMALG00000007520	-	95	47.569	ENSPEMG00000016447	Ralyl	74	51.818	Peromyscus_maniculatus_bairdii
ENSMALG00000007520	-	73	52.423	ENSPMAG00000002407	RALYL	97	50.893	Petromyzon_marinus
ENSMALG00000007520	-	98	62.215	ENSPFOG00000002643	-	81	72.973	Poecilia_formosa
ENSMALG00000007520	-	98	76.712	ENSPFOG00000001583	-	83	76.953	Poecilia_formosa
ENSMALG00000007520	-	98	76.289	ENSPLAG00000015305	-	83	75.686	Poecilia_latipinna
ENSMALG00000007520	-	83	72.510	ENSPLAG00000000061	-	79	74.510	Poecilia_latipinna
ENSMALG00000007520	-	83	72.112	ENSPMEG00000016524	-	79	73.725	Poecilia_mexicana
ENSMALG00000007520	-	98	77.663	ENSPMEG00000004802	-	83	77.255	Poecilia_mexicana
ENSMALG00000007520	-	90	76.952	ENSPREG00000007928	-	83	74.902	Poecilia_reticulata
ENSMALG00000007520	-	83	71.713	ENSPREG00000001852	-	85	74.118	Poecilia_reticulata
ENSMALG00000007520	-	95	46.332	ENSPPYG00000018710	-	81	47.111	Pongo_abelii
ENSMALG00000007520	-	95	46.735	ENSPVAG00000010821	RALYL	81	48.548	Pteropus_vampyrus
ENSMALG00000007520	-	99	68.571	ENSPNYG00000003747	-	86	75.097	Pundamilia_nyererei
ENSMALG00000007520	-	92	76.978	ENSPNYG00000020293	-	87	80.709	Pundamilia_nyererei
ENSMALG00000007520	-	84	69.478	ENSPNAG00000019200	zgc:55733	83	71.429	Pygocentrus_nattereri
ENSMALG00000007520	-	80	76.991	ENSPNAG00000015686	hnrnpc	86	74.800	Pygocentrus_nattereri
ENSMALG00000007520	-	95	50.545	ENSRROG00000023925	RALYL	82	76.543	Rhinopithecus_roxellana
ENSMALG00000007520	-	85	70.115	ENSSFOG00015012015	-	81	81.043	Scleropages_formosus
ENSMALG00000007520	-	84	70.881	ENSSFOG00015012924	-	80	94.937	Scleropages_formosus
ENSMALG00000007520	-	83	71.146	ENSSMAG00000011147	-	78	81.517	Scophthalmus_maximus
ENSMALG00000007520	-	90	77.695	ENSSMAG00000013592	-	81	76.680	Scophthalmus_maximus
ENSMALG00000007520	-	85	77.953	ENSSDUG00000006730	-	81	76.863	Seriola_dumerili
ENSMALG00000007520	-	90	83.521	ENSSDUG00000001723	-	88	82.836	Seriola_dumerili
ENSMALG00000007520	-	88	82.443	ENSSLDG00000007454	-	83	82.213	Seriola_lalandi_dorsalis
ENSMALG00000007520	-	85	77.953	ENSSLDG00000007474	-	88	76.471	Seriola_lalandi_dorsalis
ENSMALG00000007520	-	85	74.902	ENSSPAG00000013996	-	80	76.863	Stegastes_partitus
ENSMALG00000007520	-	89	84.091	ENSSPAG00000023204	-	88	83.582	Stegastes_partitus
ENSMALG00000007520	-	95	46.875	ENSTGUG00000011689	RALYL	76	50.909	Taeniopygia_guttata
ENSMALG00000007520	-	85	76.680	ENSTRUG00000020158	-	84	76.680	Takifugu_rubripes
ENSMALG00000007520	-	84	73.016	ENSTNIG00000000334	-	94	70.472	Tetraodon_nigroviridis
ENSMALG00000007520	-	85	73.745	ENSTNIG00000007427	-	84	72.587	Tetraodon_nigroviridis
ENSMALG00000007520	-	82	44.715	ENSTBEG00000005551	RALYL	94	43.750	Tupaia_belangeri
ENSMALG00000007520	-	95	46.290	ENSTTRG00000015762	RALYL	74	51.628	Tursiops_truncatus
ENSMALG00000007520	-	95	47.059	ENSVPAG00000008501	RALYL	74	51.961	Vicugna_pacos
ENSMALG00000007520	-	88	78.039	ENSXCOG00000006552	-	82	76.860	Xiphophorus_couchianus
ENSMALG00000007520	-	53	78.528	ENSXCOG00000019434	-	93	66.667	Xiphophorus_couchianus
ENSMALG00000007520	-	98	74.570	ENSXMAG00000009333	-	83	74.118	Xiphophorus_maculatus
ENSMALG00000007520	-	83	71.713	ENSXMAG00000022849	-	83	73.725	Xiphophorus_maculatus